Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P11
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0482 - 17643603-17643955,17644024-17646604                       29   2.9  
09_01_0093 - 1360596-1360625,1363562-1364266                           29   5.1  
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548...    28   8.9  
02_02_0513 + 11100307-11100363,11101423-11101728                       28   8.9  
02_02_0512 + 11092907-11093204,11095454-11095580,11096016-110965...    28   8.9  

>08_02_0482 - 17643603-17643955,17644024-17646604
          Length = 977

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 4  PAAAPSRHPFRWPHALC 54
          P  +PS  P RWPH LC
Sbjct: 46 PGLSPSLSPCRWPHLLC 62


>09_01_0093 - 1360596-1360625,1363562-1364266
          Length = 244

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -2

Query: 506 TAIREE---LTGARVQYKYSVISAQVNQGSVLIDIKTTEVHYVV 384
           T +REE    T  + Q  Y+V  A +NQ  VL++  T ++ +V+
Sbjct: 132 TEVREEPPRCTNFQDQVDYAVQRALINQSGVLVNTLTNKIKFVI 175


>02_05_1134 -
           34352154-34352375,34353683-34353746,34353820-34354859,
           34355193-34355261,34355502-34355606,34355992-34356161,
           34356244-34356351,34356397-34356525,34356577-34356681,
           34357186-34357475,34357575-34357679,34358195-34358289,
           34358474-34358569,34358660-34358782,34359120-34359174,
           34359254-34359417,34359881-34359971,34360180-34360334,
           34360823-34361002,34361314-34361487,34361776-34361917,
           34362023-34362325,34362443-34362522
          Length = 1354

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = -2

Query: 491 ELTGARVQYKYSVISAQVNQGSVLIDIKTTEVHYVVWAIDH-----TRFLGRVQVNEPNF 327
           EL G  V+  Y  + A V+QGS+        V   VW I          +G +Q  EP  
Sbjct: 470 ELQGYSVRLLYMALQAFVDQGSL--------VRVAVWCIGEYGEMLVNNVGMLQGEEPIT 521

Query: 326 VILEIFYSRL 297
           +I+ IF+S +
Sbjct: 522 IIIAIFFSAI 531


>02_02_0513 + 11100307-11100363,11101423-11101728
          Length = 120

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 435 VYLGGNDGIFVLDTGSSQLLPYSSRGDPIES 527
           ++L G DG   LD G++Q LP S  GDPI +
Sbjct: 63  IFLFG-DG--ALDVGNNQYLPSSEAGDPIRA 90


>02_02_0512 +
           11092907-11093204,11095454-11095580,11096016-11096560,
           11096679-11096890
          Length = 393

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 435 VYLGGNDGIFVLDTGSSQLLPYSSRGDPIES 527
           ++L G DG   LD G++Q LP S  GDPI +
Sbjct: 44  IFLFG-DG--ALDVGNNQYLPSSEAGDPIRA 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,655,365
Number of Sequences: 37544
Number of extensions: 332527
Number of successful extensions: 713
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)