Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P11
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75962-1|CAA53576.1|  277|Homo sapiens OX40 homologue protein.         34   0.61 
S76792-1|AAB33944.1|  274|Homo sapiens OX40 protein.                   34   0.61 
DQ118974-1|AAZ15374.1|  277|Homo sapiens tumor necrosis factor r...    34   0.61 
BC105072-1|AAI05073.1|  277|Homo sapiens tumor necrosis factor r...    34   0.61 
BC105070-1|AAI05071.1|  277|Homo sapiens tumor necrosis factor r...    34   0.61 
AL162741-8|CAI23250.1|  277|Homo sapiens tumor necrosis factor r...    34   0.61 
AL162741-7|CAI23249.1|  131|Homo sapiens tumor necrosis factor r...    34   0.61 
AJ277151-1|CAB96543.1|  277|Homo sapiens CD134 antigen protein.        34   0.61 

>X75962-1|CAA53576.1|  277|Homo sapiens OX40 homologue protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 107 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 141


>S76792-1|AAB33944.1|  274|Homo sapiens OX40 protein.
          Length = 274

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 104 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 138


>DQ118974-1|AAZ15374.1|  277|Homo sapiens tumor necrosis factor
           receptor superfamily, member 4 protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 107 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 141


>BC105072-1|AAI05073.1|  277|Homo sapiens tumor necrosis factor
           receptor superfamily, member 4 protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 107 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 141


>BC105070-1|AAI05071.1|  277|Homo sapiens tumor necrosis factor
           receptor superfamily, member 4 protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 107 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 141


>AL162741-8|CAI23250.1|  277|Homo sapiens tumor necrosis factor
           receptor superfamily, member 4 protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 107 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 141


>AL162741-7|CAI23249.1|  131|Homo sapiens tumor necrosis factor
           receptor superfamily, member 4 protein.
          Length = 131

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 52  CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 86


>AJ277151-1|CAB96543.1|  277|Homo sapiens CD134 antigen protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 537 CRICSRSDPRDCYKGGVDWSPCPIQIFRHFRPSKPRIC 424
           CR  + + P D YK GVD +PCP     HF P   + C
Sbjct: 107 CRCRAGTQPLDSYKPGVDCAPCPP---GHFSPGDNQAC 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,765,161
Number of Sequences: 237096
Number of extensions: 1830619
Number of successful extensions: 6480
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6480
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)