Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P10
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 192 1e-48
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 192 1e-48
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 192 1e-48
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 192 1e-48
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 192 1e-48
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 186 1e-46
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 186 1e-46
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 186 1e-46
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 186 1e-46
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 186 1e-46
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 186 1e-46
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 163 1e-39
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 150 5e-36
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 100 1e-25
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 111 2e-24
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 92 2e-18
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 51 6e-06
AY392939-1|AAS85879.1| 141|Homo sapiens immunoglobulin heavy ch... 31 7.1
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 30 9.3
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 30 9.3
BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein. 30 9.3
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 30 9.3
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 192 bits (468), Expect = 1e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 155 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 334
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 335 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 514
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 515 -------AAPKPL---EEDDEVPNLVGNFDEASK 586
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 192 bits (468), Expect = 1e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 155 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 334
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 335 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 514
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 515 -------AAPKPL---EEDDEVPNLVGNFDEASK 586
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 192 bits (468), Expect = 1e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 155 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 334
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 335 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 514
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 515 -------AAPKPL---EEDDEVPNLVGNFDEASK 586
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 192 bits (468), Expect = 1e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 155 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 334
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 335 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 514
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 515 -------AAPKPL---EEDDEVPNLVGNFDEASK 586
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 192 bits (468), Expect = 1e-48
Identities = 102/154 (66%), Positives = 110/154 (71%), Gaps = 10/154 (6%)
Frame = +2
Query: 155 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 334
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 335 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 514
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 515 -------AAPKPL---EEDDEVPNLVGNFDEASK 586
APKP EEDD+VP+LV NFDEASK
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK 154
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 186 bits (452), Expect = 1e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 586
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 186 bits (452), Expect = 1e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 586
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 186 bits (452), Expect = 1e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 104
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 105 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 164
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 586
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 165 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 202
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 186 bits (452), Expect = 1e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 586
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 186 bits (452), Expect = 1e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 586
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 186 bits (452), Expect = 1e-46
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDEASK 586
+A SV PL ++DDEVP+LV NFDEASK
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASK 158
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 163 bits (395), Expect = 1e-39
Identities = 87/137 (63%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
Frame = +2
Query: 206 KGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 385
+GT RRKKKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QAS
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72
Query: 386 LAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV-------AAPKPL---E 535
L+ANTFAITGH E K TEMLPGILSQLG D L L+++A APKP E
Sbjct: 73 LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDE 132
Query: 536 EDDEVPNLVGNFDEASK 586
EDD+VP+LV NFDEASK
Sbjct: 133 EDDDVPDLVENFDEASK 149
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 150 bits (364), Expect = 5e-36
Identities = 80/147 (54%), Positives = 92/147 (62%)
Frame = +2
Query: 137 TLKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGI 316
T +++ KL KLQ+QVRIGGKGT RKKKV H TA DD VN I GI
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGI 89
Query: 317 EEVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLK 496
E+VNM GTVIHFNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L L+
Sbjct: 90 EKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLR 149
Query: 497 RIASSVAAPKPLEEDDEVPNLVGNFDE 577
R+A V +P+ D + P G D+
Sbjct: 150 RLA-EVLPKQPV--DGKAPLATGGDDD 173
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 100 bits (239), Expect(2) = 1e-25
Identities = 56/95 (58%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Frame = +2
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 499
+VNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126
Query: 500 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 577
+A SV PL ++DDEVP G F E
Sbjct: 127 LAEALPKQSVDGKAPLATGEDDDDEVP---GGFQE 158
Score = 36.7 bits (81), Expect(2) = 1e-25
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGK 208
+K + MN EKL KLQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 111 bits (268), Expect = 2e-24
Identities = 61/106 (57%), Positives = 69/106 (65%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN +KL K Q++V G KGT RKK VVH TA +D VN IPGIE
Sbjct: 1 MKETIMN-QKLTKRQAEVHTGRKGTAHRKK-VVHTTA--EDKKFQFSLKKLGVNNIPGIE 56
Query: 320 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGI 457
EVNM GTVIHFNNP+ QASLAANTF +TGH E KQ TEML I
Sbjct: 57 EVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 92.3 bits (219), Expect = 2e-18
Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 10/98 (10%)
Frame = +2
Query: 323 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 502
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ TEML +L+QL L L+R+
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 503 A-----SSVAAPKPL-----EEDDEVPNLVGNFDEASK 586
A SV PL ++DDEVP ++ NFDEASK
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIMENFDEASK 98
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 50.8 bits (116), Expect = 6e-06
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +2
Query: 140 LKNSXMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 319
+K + MN EKL KLQ++V IGG +KKVVH TA +D ++ GIE
Sbjct: 1 MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLEIS---GIE 54
Query: 320 EVNMIKEDGTVI 355
EVNM TVI
Sbjct: 55 EVNMFTNQATVI 66
>AY392939-1|AAS85879.1| 141|Homo sapiens immunoglobulin heavy chain
protein.
Length = 141
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 716 MSRVSEAICVSKE*FSLLFHYVPGCMNFIMYCICLER 826
MSRV+ + SK FSL+ + V + YC+ L+R
Sbjct: 73 MSRVTMPVDTSKNQFSLILNLVTAADTAVYYCVSLQR 109
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 476 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 589
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 476 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 589
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>BC050444-1|AAH50444.1| 166|Homo sapiens GOLGA4 protein protein.
Length = 166
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 476 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 589
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 100 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 137
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 476 DGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQ 589
+ LNRL +S+ + P + D E +LVGN D +K+
Sbjct: 131 ESLNRLDLDSSTASFDPPSDMDSEAEDLVGNSDSLNKE 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,581,825
Number of Sequences: 237096
Number of extensions: 2071234
Number of successful extensions: 10280
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10264
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -