Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P08
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13642-6|AAG00038.1|  175|Caenorhabditis elegans Hypothetical pr...    72   5e-13
Z49908-1|CAA90093.1|  816|Caenorhabditis elegans Hypothetical pr...    31   0.95 
DQ342049-1|ABC69941.1|  830|Caenorhabditis elegans STIP protein.       31   0.95 
Z95619-4|CAB09113.2|  397|Caenorhabditis elegans Hypothetical pr...    31   1.3  
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.        29   5.1  
AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical...    29   5.1  
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical...    29   5.1  
Z81482-1|CAB03953.2|  208|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>U13642-6|AAG00038.1|  175|Caenorhabditis elegans Hypothetical
           protein ZC395.10 protein.
          Length = 175

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +3

Query: 63  PSVSWAQRNARXFLTFNVACXK-PDINIEPKSITFKGICXPEKKMHEVLIPLYAEVDPKK 239
           P+V WAQR +  +LT  V   K  ++  E   + F+G    +K  +E  +  + E+DP  
Sbjct: 5   PTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQGSSKTDK--YEATLEFFDEIDPAS 62

Query: 240 SMWVNKG-RLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDLD 404
                   R++E+ + K+     +WP L  +K K HWLKVDF +W+DEDE  +  D
Sbjct: 63  VKHTGSSTRVVEITVQKKT--PAWWPRLLQNKGKVHWLKVDFGKWKDEDEDDEAED 116


>Z49908-1|CAA90093.1|  816|Caenorhabditis elegans Hypothetical
           protein C07E3.1a protein.
          Length = 816

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +3

Query: 180 PEKKMHEVLIPLYAEVDPKKSMWVNKGRLIEVLLAK--EKVDEPYWPSLTSDKKKHHWL 350
           P  +MHE +I L  +  P  S W+ +  L ++++ K  E+V++  W  +T +   H WL
Sbjct: 489 PSTQMHE-MIELVEQWIPLLSAWITENILEQLVVPKIAERVNQ--WDPMTDEIPIHEWL 544


>DQ342049-1|ABC69941.1|  830|Caenorhabditis elegans STIP protein.
          Length = 830

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +3

Query: 180 PEKKMHEVLIPLYAEVDPKKSMWVNKGRLIEVLLAK--EKVDEPYWPSLTSDKKKHHWL 350
           P  +MHE +I L  +  P  S W+ +  L ++++ K  E+V++  W  +T +   H WL
Sbjct: 503 PSTQMHE-MIELVEQWIPLLSAWITENILEQLVVPKIAERVNQ--WDPMTDEIPIHEWL 558


>Z95619-4|CAB09113.2|  397|Caenorhabditis elegans Hypothetical
           protein H21P03.2 protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/75 (25%), Positives = 37/75 (49%)
 Frame = +3

Query: 204 LIPLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDED 383
           L+ L  +   +  + +N G +I+ + A  K+ +     + +  K H    VD + W DE 
Sbjct: 105 LLELVGQTTRETLLEINGGAVIDPVDAGNKIGDAL-KQIETSVKAH---TVDKSNWCDEW 160

Query: 384 ESGDDLDNMNDMFSD 428
              D++D +N+M+ D
Sbjct: 161 IVDDNMDEINEMYDD 175


>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
          Length = 2553

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 KPDINIEPKSITFKGICXPEKK--MHEVLIPLYA----EVDPKKSMWVNKGRLIEVLLAK 287
           K  +  EP ++ +       +K  MH+V    Y     + +P KS+W++ GR  E  L +
Sbjct: 16  KKTMQFEPSTLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTFEHYLVR 75

Query: 288 EKVDEPY 308
            K +  Y
Sbjct: 76  NKDEIEY 82


>AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11b protein.
          Length = 996

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 KPDINIEPKSITFKGICXPEKK--MHEVLIPLYA----EVDPKKSMWVNKGRLIEVLLAK 287
           K  +  EP ++ +       +K  MH+V    Y     + +P KS+W++ GR  E  L +
Sbjct: 16  KKTMQFEPSTLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTFEHYLVR 75

Query: 288 EKVDEPY 308
            K +  Y
Sbjct: 76  NKDEIEY 82


>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11a protein.
          Length = 2553

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 KPDINIEPKSITFKGICXPEKK--MHEVLIPLYA----EVDPKKSMWVNKGRLIEVLLAK 287
           K  +  EP ++ +       +K  MH+V    Y     + +P KS+W++ GR  E  L +
Sbjct: 16  KKTMQFEPSTLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTFEHYLVR 75

Query: 288 EKVDEPY 308
            K +  Y
Sbjct: 76  NKDEIEY 82


>Z81482-1|CAB03953.2|  208|Caenorhabditis elegans Hypothetical
           protein C40H5.2 protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +3

Query: 273 VLLAKEK--VDEPYWPSLTSDKKKHHWLKVD--FNRWQDEDESGDDLDNMN 413
           V + KE+  + + +W S +S+K   +    +  +NRW +ED+  DDL   N
Sbjct: 123 VRMRKERRGLTQVFWESASSNKMGFYISVPNKHYNRWAEEDDMFDDLPTEN 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,730,056
Number of Sequences: 27780
Number of extensions: 280678
Number of successful extensions: 712
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)