Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P06
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    325   6e-91
DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor...    25   1.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   4.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.2  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  325 bits (799), Expect = 6e-91
 Identities = 161/165 (97%), Positives = 161/165 (97%)
 Frame = +3

Query: 147 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 326
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 327 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 506
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 507 FAGKQLEDGRTLSDYNIXXESTLHLVLRLRGGMXIFVKTLTGKTI 641
           FAGKQLEDGRTLSDYNI  ESTLHLVLRLRGGM IFVKTLTGKTI
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI 165



 Score =  302 bits (742), Expect = 5e-84
 Identities = 149/152 (98%), Positives = 149/152 (98%)
 Frame = +3

Query: 147 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 326
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 327 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 506
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196

Query: 507 FAGKQLEDGRTLSDYNIXXESTLHLVLRLRGG 602
           FAGKQLEDGRTLSDYNI  ESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228


>DQ080895-1|AAY89541.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 607 CMPPRRRSTRWSVDSXXML*SDNVRPSSSCLPAKMRRC 494
           C PP RR+ RW V    +L + N+   + C+  + R C
Sbjct: 34  CWPPDRRTRRWYV---KVLIAVNLITLAICIVGEFRYC 68


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 338  FFLNVVV*QGASVFQLLASKDETLLIRRNSF 246
            FF+  V+  G  VF  +A  DET + R N+F
Sbjct: 1320 FFIYAVI--GMQVFGKIAMDDETSIHRNNNF 1348


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 446 LNCVRSFYFQSDGLSGQSFH 387
           + CVR+ Y +   +SG  FH
Sbjct: 267 VRCVRTIYDEHQRISGNGFH 286


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +3

Query: 243 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 365
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,705
Number of Sequences: 2352
Number of extensions: 13640
Number of successful extensions: 67
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)