Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P05
         (877 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   128   9e-32
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    33   0.005

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  128 bits (308), Expect = 9e-32
 Identities = 68/238 (28%), Positives = 119/238 (50%)
 Frame = +2

Query: 155 FYKQAYSLFSKHGVKGFTPLPFFGNMGRIVIKMDHFSDHIQSLYDSFPEERFVGRYEFLN 334
           +    +  +   GV G  P+PFFG    +++     +  ++ +Y+ +  E  VG Y   +
Sbjct: 21  YLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRS 80

Query: 335 PMVIIRDIELLKKITVKDFEHFLDHRTIINKDTDPFFGRSLFFLRDQDWKDMRSTLSPAF 514
           P +++ D EL+K I ++DF  F +    + + T+P     L  L  + W+ +RS LSP F
Sbjct: 81  PFLLLNDPELIKDILIRDFSKFANRGLGVFERTEP-LSPHLLNLEVERWRPLRSRLSPIF 139

Query: 515 TSSKMKLMMPFIVEVGQQMNKALKQRIQEAGVGYVDIDSKDLTTRYANDVIASCAFGLKV 694
           TS K+K M   I+E    +   L + I++       I+ ++LT R+  DVI SCAFG+ +
Sbjct: 140 TSGKLKEMFYLIIECSLNLETYLDKLIEK----NEPIECRELTARFTTDVIGSCAFGIDM 195

Query: 695 DSITEENNQFYAMGKAASTFNFRQLLIFFGLASVPXLVKILRITLFQKEIKTFFRELI 868
            S+T EN++F  MG+     NF  ++       +P L  +L   +  +    FF  ++
Sbjct: 196 SSMTNENSEFRRMGREVFAVNFMNVMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTRVV 253


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 6/126 (4%)
 Frame = +2

Query: 374 ITVKDFEHFLDHRTIINKDTD-----PFFGRSLFFLRDQDWKDMRSTLSPAFTSSKMKLM 538
           I  +D E  L     I+K T+     P+ G  L     Q W++ R  ++P F    + ++
Sbjct: 94  IDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTF---HLNVL 150

Query: 539 MPFIVEVGQQMNKALKQRIQEAGVGYVDIDSKDLTTRYANDVIASCAFGLKVDSITEENN 718
             FI          +++  +E G    + D  +  +    D++   A G  V   T ++N
Sbjct: 151 KSFIDLFNANARSVVEKMRKENG---KEFDCHNYMSELTVDILLETAMG--VSKPTRDHN 205

Query: 719 QF-YAM 733
            F YAM
Sbjct: 206 AFEYAM 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,964
Number of Sequences: 438
Number of extensions: 4928
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)