Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P04
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.62 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.62 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.62 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.6  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 435 IESIFSIFPNPILIMGDFNAQHVAWGSS 352
           +  IF  FP   ++  DF A H  W S+
Sbjct: 43  LAQIFGFFPAQGILGRDFRAIHFTWASA 70


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 435 IESIFSIFPNPILIMGDFNAQHVAWGSS 352
           +  IF  FP   ++  DF A H  W S+
Sbjct: 43  LAQIFGFFPAQGILGRDFRAIHFTWASA 70


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 435 IESIFSIFPNPILIMGDFNAQHVAWGSS 352
           +  IF  FP   ++  DF A H  W S+
Sbjct: 43  LAQIFGFFPAQGILGRDFRAIHFTWASA 70


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 285 YLKYTIYTYRPYPTVESHNDY*WSCPM 365
           Y+ +  Y YRPYP    +N + WS P+
Sbjct: 252 YVPFYRYCYRPYPV---YNQW-WSGPL 274


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 456 TSSVYNEIESIFSIFPNPI 400
           TSSV N  ES  S+FPN I
Sbjct: 49  TSSVSNFNESSSSVFPNYI 67


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 456 TSSVYNEIESIFSIFPNPI 400
           TSSV N  ES  S+FPN I
Sbjct: 49  TSSVSNFNESSSSVFPNYI 67


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 34  HLFNFFFQRKPIRIF 78
           HLFNFF    P+ IF
Sbjct: 356 HLFNFFEFSVPLAIF 370


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 276 PYQYLKYTIYTYRPYP 323
           PY+++K T Y  +P P
Sbjct: 123 PYEWIKKTSYQSQPNP 138


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 276 PYQYLKYTIYTYRPYP 323
           PY+++K T Y  +P P
Sbjct: 123 PYEWIKKTSYQSQPNP 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,739
Number of Sequences: 336
Number of extensions: 2964
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)