Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P04
(720 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 58 3e-10
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 56 8e-10
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 54 4e-09
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 52 1e-08
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 48 4e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 47 7e-07
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 46 2e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 45 2e-06
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 44 4e-06
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 44 5e-06
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 43 8e-06
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 42 3e-05
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 38 3e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 36 0.001
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 34 0.005
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 28 0.25
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 27 0.44
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 25 3.1
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 58.0 bits (134), Expect = 3e-10
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Frame = -1
Query: 603 SDGYGGVALLIKNNISFSQFTIPNHSSDFSIIAITINNICYVSLYIPHPTS-SVYNEIES 427
SD G A+ Q I H + +IA+ IN I + S Y P + E+
Sbjct: 47 SDSTGTAAIWASGRFPIQQI-ISRHGEGY-VIAV-INKITFCSCYAPPRWDLEKFEEMLK 103
Query: 426 IFS--IFP-NPILIMGDFNAQHVAWGSSISNHYGSRLLDMVDKYKWCILNTGKATRRTQP 256
S ++ NPI+I GDFNA WGS +N G+ +L+ + ++N G +
Sbjct: 104 RISDEVYDVNPIIISGDFNAWATEWGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR- 162
Query: 255 HEEISAPDLSICTPNLASIVSW 190
+ S DL+ C+P LAS ++W
Sbjct: 163 NSRTSIIDLTFCSPALASSMNW 184
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 56.4 bits (130), Expect = 8e-10
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Frame = -1
Query: 513 IIAITINNICYVSLYIP--HPTSSVYNEIESIF--SIFPNPILIMGDFNAQHVAWGSSIS 346
++A I ++S Y P PT IE++ ++ + ++I GDFNA HV WGS +
Sbjct: 78 LVAAEIGGTTFLSCYAPPRQPTDEFERFIEAVQLETLTHSQVVIAGDFNAWHVEWGSERN 137
Query: 345 NHYGSRLLDMVDKYKWCILNTG-KATRRTQPHEEISAPDLSICTPNLASIVSWNTLAXR* 169
+ G LL + + +LN G +T S D++ TP +A +WN
Sbjct: 138 SEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATPTIAQPGTWNVCGDYS 197
Query: 168 GSXHFPXVINLPXATAARTKWRAPRMK 88
S H + + +PRM+
Sbjct: 198 YSDHRYITYTVGTIVPVVNEPSSPRMR 224
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 54.0 bits (124), Expect = 4e-09
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = -1
Query: 513 IIAITINNICYVSLYI-PHPTSSVYNE----IESIFSIFPNPILIMGDFNAQHVAWGSSI 349
++A I I ++S Y P T + + E +E S PN +++ GDFNA H AWGS+
Sbjct: 75 LVAADIGGITFISCYASPRMTVAEFEEFLNAVEIEVSAHPN-VVLGGDFNAWHEAWGSAR 133
Query: 348 SNHYGSRLLDMVDKYKWCILNTGKATRRT-QPHEEISAPDLSICTPNLASIVSWNTL 181
+ G LL+ V++ +LN G + T + S D++ +P++ +W L
Sbjct: 134 TKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASPSIVRYNTWEVL 190
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 52.4 bits (120), Expect = 1e-08
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Frame = -1
Query: 513 IIAITINNICYVSLYIPHPTSSVYNE--IESIF--SIFPNPILIMGDFNAQHVAWGSSIS 346
++A + I ++S+Y P S E +E++ + + ++I GDFNA H WGS +
Sbjct: 77 LVAAKVAGIDFISVYAPPSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRRN 136
Query: 345 NHYGSRLLDMVDKYKWCILNTGKA-TRRTQPHEEISAPDLSICTPNLASIVSWNTL 181
N G LL MV+ ILN G A T + S D++ TP+L +W L
Sbjct: 137 NLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATPSLVLHDTWEVL 192
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 47.6 bits (108), Expect = 4e-07
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -1
Query: 513 IIAITINNICYVSLYI-PHPTSSVYNEIESIFSIFP--NP-ILIMGDFNAQHVAWGSSIS 346
I A IN++ ++ Y+ P S + E+ + +P ++ GD NA H AWGS +
Sbjct: 75 IAAARINDVLFICCYVSPSAGVSEFEEVMQRIDVLARGHPRVVFAGDLNAWHTAWGSCRT 134
Query: 345 NHYGSRLLDMVDKYKWCILNTGKA 274
N G ++ +VD +LNTG A
Sbjct: 135 NAKGEAVVQLVDSLGLEVLNTGTA 158
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 46.8 bits (106), Expect = 7e-07
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Frame = -1
Query: 513 IIAITINNICYVSLYI-PHPTSSVYNEIESIFSIF--PNP-ILIMGDFNAQHVAWGSSIS 346
I+ +N I V Y+ P+ + EI I +P +L+ GDFNA H AWGS +
Sbjct: 75 IVVADVNGITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAGDFNAWHTAWGSERT 134
Query: 345 NHYGSRLLDMVDKYKWCILNTG-----KATRRTQPHE-EISAPDLSICTPNLA--SIVSW 190
G LL +V+ +LN G + +P +++ SIC P+LA S W
Sbjct: 135 KPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRPDLAANSATCW 194
Query: 189 NTLAXR*GSXH 157
L+ S H
Sbjct: 195 RILSRYSYSDH 205
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 45.6 bits (103), Expect = 2e-06
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Frame = -1
Query: 513 IIAITINNICYVSLYI-PHPTSSVYNEIESIFSIFPNP---ILIMGDFNAQHVAWGSSIS 346
I+A I I ++S Y P Y + + + ++I GDFNA H WGS+ +
Sbjct: 97 IVAAQIGGIVFISCYARPRRPEEDYEGFLAAVQLEASTHSQVVIDGDFNAWHTEWGSARN 156
Query: 345 NHYGSRLLDMVDKYKWCILNTG-KATRRTQPHEEISAPDLSICTPNLASIVSW 190
+ G LL ++ + ++N+G + T + S D+ TP++A +W
Sbjct: 157 SQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATPSIARPETW 209
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 45.2 bits (102), Expect = 2e-06
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = -1
Query: 513 IIAITINNICYVSLYIPHPTSSVYNE--IESI-FSIFPNP-ILIMGDFNAQHVAWGSSIS 346
++A I + ++S Y P + E +E+I F +P +++ GDFNA+H WGS +
Sbjct: 88 LVAAQIGGVVFISCYAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRT 147
Query: 345 NHYGSRLLDMVDKYKWCILNTGKATRRTQPHEEI-SAPDLSICTPNLASIVSW 190
G L MV++ ++N G+ + S D++ +P++A +W
Sbjct: 148 CDRGEELHGMVEQLGLIVINQGREYTFVGNGVALPSIVDVAFASPSIARPDTW 200
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 44.4 bits (100), Expect = 4e-06
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Frame = -1
Query: 513 IIAITINNICYVSLYIPHPTSSVYNEIESIFSIFP------NPILIMGDFNAQHVAWGSS 352
++A + I ++S+Y P P+ S + E E + + +++ GDFNA H WGS
Sbjct: 140 LVAAQVAGITFISVYAP-PSLSAH-EFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSG 197
Query: 351 ISNHYGSRLLDMVDKYKWCILNTG-KATRRTQPHEEISAPDLSICTPNLASIVSWNTL 181
+ G LL V+ ILN G K T + S D+S + + +W+ +
Sbjct: 198 RNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSFASREIVRPDTWSVI 255
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 44.0 bits (99), Expect = 5e-06
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = -1
Query: 528 SSDF-SIIAITINNICYVSLYIPHPTSSV-YNE-IESI-FSIFPNP-ILIMGDFNAQHVA 364
SSD +IA + I ++S Y P S + E +E+I +P +++ GDFNA H
Sbjct: 128 SSDVPGLIAAKVGGITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEE 187
Query: 363 WGSSISNHYGSRLLDMVDKYKWCILNTGK-ATRRTQPHEEISAPDLSICTPNLASIVSW 190
WGS SN G LL+ + ++N G AT S D++ + ++A +W
Sbjct: 188 WGSRRSNERGEVLLEASQQLGLLLMNRGNVATFVGNGVATASVVDVTFASSSIAQPSTW 246
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 43.2 bits (97), Expect = 8e-06
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -1
Query: 405 PILIMGDFNAQHVAWGSSISNHYGSRLLDMVDKYKWCILNTGKATRRTQPHEEISAPDLS 226
P++I GDFNA V WGS +N G +L+ + + N G T ++ S D++
Sbjct: 112 PLVIAGDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAG-TTPTFNRNKRTSIVDIT 170
Query: 225 ICTPNLASIVSW 190
C+ L+ ++W
Sbjct: 171 FCSTTLSERLNW 182
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 41.5 bits (93), Expect = 3e-05
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = -1
Query: 531 HSSDFSIIAITINNICYVSLYIPHPTS-----SVYNEIESIFSIFPNPILIMGDFNAQHV 367
H ++A + VS Y+ T S+ +I+ I +L+ GDFNA H+
Sbjct: 70 HRQTLGVVAADVGGTTIVSCYVSPQTGVPEFRSIMEKIDLIVRGCSR-VLLAGDFNAMHL 128
Query: 366 AWGSSISNHYGSRLLDMVDKYKWCILN 286
WGSS + G LL + D +LN
Sbjct: 129 DWGSSRTCPKGLELLQLADNLGLVLLN 155
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 37.9 bits (84), Expect = 3e-04
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Frame = -1
Query: 684 LISLQETWXRPG------FNFRIPKYSCIRE--DRSDGYGGVALLIKNNISFSQFTIPNH 529
LI+L ETW FN Y C R S GGV L + N + +
Sbjct: 108 LIALTETWLVDNIPSALLFNNNFSVYRCDRSLSGSSSRGGGVLLAVSNAYESIELPSRDR 167
Query: 528 SSDFSIIAITINNI-CYVSL-YIPHPTSSVYNEIESI------FSIFPNP---ILIMGDF 382
S ++ + + NN YV + YIP SS + + S+ F++ P + ++GDF
Sbjct: 168 SLEYICVRVACNNAHLYVMVVYIPPQLSSEISTLRSLHDCISSFTLRLKPSDLLFVIGDF 227
Query: 381 NAQHVAWGSS 352
N ++W ++
Sbjct: 228 NQPSISWSTA 237
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 35.9 bits (79), Expect = 0.001
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Frame = -1
Query: 513 IIAITINNICYVSLYIPHPTSSVYNEIESIFSIF-----PNPILIMGDFNAQHVAWGSSI 349
++A+ + I VS Y P P+ +V E + +I + ++ GDFNA +W +++
Sbjct: 75 MLAVEVGGILIVSAYAP-PSWTVQEFEELLDNIVLTVSGSSKFVVAGDFNAWSSSWANTL 133
Query: 348 SNH------YGSRLLDMVDKYKWCILNTGKATRRTQPHEEISAPDLSICTPNLASIVSWN 187
G LL + ++N G+ T T E SA DL+ + +L W
Sbjct: 134 GARGESQRLRGDTLLAAFAGLEMVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWE 191
Query: 186 TLAXR*GSXHFPXVINL 136
L S H +I +
Sbjct: 192 VLPDYMNSDHIGILITI 208
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 33.9 bits (74), Expect = 0.005
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Frame = -1
Query: 603 SDGYGGVALLIKNNISFSQFTIPNHSSDFSIIAITINNICYVSLYIPHPTSSVYNEI--- 433
+D G VA++ + F + I N DF + + + I + S+Y+P S + E
Sbjct: 48 TDTTGRVAVVSVGDYPFQRI-IDNQREDF--VVVEMRGIVFCSVYLPPVGSDLTVEEYKR 104
Query: 432 --ESIFSIFP-NPILIMGDF-NAQHVAWGSSISNHYGSRL------LDMVDKYKWCILNT 283
I S+ P N ++G + N AWG + G R+ +D +LN
Sbjct: 105 KWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDGERVSRGGVVMDAAAALGLVLLNQ 164
Query: 282 GKATRRTQPHEEISAPDLSICTPNLASIVSW 190
G + + S D+S C+P+L +W
Sbjct: 165 GNQSTWIGANGRNSIVDVSFCSPSLVGDNNW 195
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 28.3 bits (60), Expect = 0.25
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Frame = -1
Query: 513 IIAITINNICYVSLYIPHPTSSVYNEI---ESIFSIFP-NPILIMGDFNAQHVAWGSSI- 349
++ + I ++ VS+Y P S +I ++ ++ + +I GDFNA +W + +
Sbjct: 73 LMVVDIGDMRVVSVYAPPRFSMEEFQIMLDNTVMAVTGIHKFVIGGDFNAWSASWNNQLG 132
Query: 348 -----SNHYGSRLLDMVDKYKWCILNTGKATRRTQPHEEISAPDLSICTPNLASIVSWNT 184
G +L + +LN G P S DL+ + +A W
Sbjct: 133 ERGETQKRRGELVLSTFAQIDAILLNDGSTPTYVGP-GRTSVVDLTFASRTVARSFKWEV 191
Query: 183 LAXR*GSXHFPXVINL 136
L+ S H I+L
Sbjct: 192 LSSYMNSDHRAIRIDL 207
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 27.5 bits (58), Expect = 0.44
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 555 FSQFTIPNHSSDFSIIAITINNICYVSLYIPHPTSS--VYNEIESIFSIFPNPIL 397
F++FT S+ +++ I +I VS+Y+ HP S VY I ++ + P P L
Sbjct: 558 FTRFTQEIFSALITLLFIFETSIKLVSVYVRHPLLSEYVYKNI-TVAPLVPTPCL 611
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 24.6 bits (51), Expect = 3.1
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Frame = -1
Query: 624 SCIREDRSDGYGGVALLIKNNISFSQFTIPNHSSDFSIIAITINNI-CYVSL-YIPHPTS 451
S + +RS G GGV L + + + + I ++ YV + Y+P S
Sbjct: 66 SRLNNERSRG-GGVLLACSSRYPSVALNMNQPTLEALCIRVSFPKFRLYVGIVYVPPYLS 124
Query: 450 SVYNEIESIFSIF--------PNP-ILIMGDFNAQHVAWGSSISNHYGSRL 325
S N ES+ + PN ++++GDFN + W + + S L
Sbjct: 125 SDRNYFESLSAFIXDAYMHMKPNDHLILLGDFNQPALGWSPAAAVRSDSSL 175
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,239
Number of Sequences: 2352
Number of extensions: 11483
Number of successful extensions: 34
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -