Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_P01
         (709 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0853 - 21898293-21899564,21899910-21899964,21900079-21901034     30   1.6  
07_03_0255 + 15866422-15866434,15867907-15868659,15868728-15868909     30   2.1  
05_01_0426 + 3364341-3364713,3364823-3364963,3365389-3365510,336...    29   3.6  
01_07_0039 - 40667598-40669880                                         29   3.6  
08_02_0023 + 11342173-11342249,11342496-11342736                       28   6.3  
01_07_0116 + 41168750-41170054                                         28   8.4  
01_07_0114 + 41161923-41163251                                         28   8.4  

>08_02_0853 - 21898293-21899564,21899910-21899964,21900079-21901034
          Length = 760

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +1

Query: 382 ERDETKAIERAKNRINESLNAVADEKKKVQVDENELGPNILADRRNKLETASQGWRKRVP 561
           E  E +  +  +N IN    A  DE++  + +ENE+  N  A+     ET    W +   
Sbjct: 528 EETEDEERDSEENEINYEEEADQDEER--EAEENEINYNEEAEDEES-ETEEDYWSEFDF 584

Query: 562 XNDATMFTVA 591
            ND  MF VA
Sbjct: 585 ENDEVMFPVA 594


>07_03_0255 + 15866422-15866434,15867907-15868659,15868728-15868909
          Length = 315

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 391 ETKAIERAKNRINE-SLNAVADEKKKVQVDENELGPNILADRRNKLETASQGWRKRVPXN 567
           +T+    A++R+ E +L    DE +K +  +N  G       R + +TAS+G  K    N
Sbjct: 105 KTRGKRSARHRVKEPALWTSQDELQKFETGKNRNGNEQAVYSRKRKKTASKGEAKTGTGN 164

Query: 568 DAT 576
           D T
Sbjct: 165 DVT 167


>05_01_0426 +
           3364341-3364713,3364823-3364963,3365389-3365510,
           3365939-3366202,3366289-3366419,3366819-3367026,
           3367121-3367186,3367276-3367353,3368038-3368079
          Length = 474

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 385 RDETKAIERAKNRINESLNAVADEKKKVQVDENELG 492
           R   KAIE+  NR  E    V+  KKK +++E   G
Sbjct: 49  RSRAKAIEQVGNRTVEESAGVSSNKKKRRIEEETAG 84


>01_07_0039 - 40667598-40669880
          Length = 760

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 352 WRARVCRLSPERDETKAIERAKNRINESLNAVADEKKKVQVD 477
           +R+ V ++ P RD+    E A   +N++   ++D  KKV+ D
Sbjct: 93  YRSIVRQVEPVRDDLPGAEAALRLVNDAYAVLSDPAKKVRYD 134


>08_02_0023 + 11342173-11342249,11342496-11342736
          Length = 105

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +1

Query: 382 ERDETKAIERAKNRINESLNAVADEKKKVQVDENELGPNILADRRNKLETASQG 543
           ++DE K+ E + ++I   +  +  E  +++    ELG   LA+ RN  +T S+G
Sbjct: 32  QQDEVKSSEPSVHKIASQVKKLQKENIELRGRNAELGVE-LAELRNNFDTLSRG 84


>01_07_0116 + 41168750-41170054
          Length = 434

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +3

Query: 531 GVAGMAQESSPXRCYDVHGGW-PSGTRQGRYXHTTA 635
           G  G A +  P RC  V GGW  SG   G     TA
Sbjct: 84  GACGAANQQQPRRCRYVDGGWFWSGREAGSRCACTA 119


>01_07_0114 + 41161923-41163251
          Length = 442

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +3

Query: 531 GVAGMAQESSPXRCYDVHGGW-PSGTRQGRYXHTTA 635
           G  G A +  P RC  V GGW  SG   G     TA
Sbjct: 85  GTCGAANQQQPRRCRYVDGGWFWSGREAGSRCACTA 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,334,634
Number of Sequences: 37544
Number of extensions: 352682
Number of successful extensions: 1102
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)