Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_P01
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL160060-2|CAH71300.1| 2214|Homo sapiens supervillin protein. 35 0.25
AL160060-1|CAH71301.1| 1788|Homo sapiens supervillin protein. 35 0.25
AL158167-3|CAI15237.1| 2214|Homo sapiens supervillin protein. 35 0.25
AL158167-2|CAI15236.1| 1788|Homo sapiens supervillin protein. 35 0.25
AF109135-1|AAD14682.1| 2214|Homo sapiens archvillin protein. 35 0.25
AF051851-1|AAC64696.1| 1788|Homo sapiens supervillin protein. 35 0.25
AF051850-1|AAC64695.1| 1788|Homo sapiens supervillin protein. 35 0.25
AK056288-1|BAB71139.1| 784|Homo sapiens protein ( Homo sapiens ... 30 7.1
AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polym... 30 9.3
>AL160060-2|CAH71300.1| 2214|Homo sapiens supervillin protein.
Length = 2214
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 1119 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 1170
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 1171 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 1224
>AL160060-1|CAH71301.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 693 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 744
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 745 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 798
>AL158167-3|CAI15237.1| 2214|Homo sapiens supervillin protein.
Length = 2214
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 1119 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 1170
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 1171 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 1224
>AL158167-2|CAI15236.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 693 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 744
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 745 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 798
>AF109135-1|AAD14682.1| 2214|Homo sapiens archvillin protein.
Length = 2214
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 1119 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 1170
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 1171 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 1224
>AF051851-1|AAC64696.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 693 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 744
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 745 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 798
>AF051850-1|AAC64695.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 35.1 bits (77), Expect = 0.25
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 283 DMPNRGVTIXXXXXXXXXXXXNDWRARVCRLSPERDETKAIERAKNRINESLNAVADEKK 462
D P++ ++I DWR R+ R R E + E+ ++
Sbjct: 693 DSPSKTMSIKERLALLKKSGEEDWRNRLSR----RQEGGKAPASSLHTQEAGRSLI---- 744
Query: 463 KVQVDENELGPNILADRRNKLETASQGW--RKRVPXNDATMFTVAGRLERDKVA 618
K +V E+ + +R+ + + W R R ND+T FTVAGR+ + +A
Sbjct: 745 KKRVTESRESQMTIEERKQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLA 798
>AK056288-1|BAB71139.1| 784|Homo sapiens protein ( Homo sapiens
cDNA FLJ31726 fis, clone NT2RI2006735, weakly similar to
Neofelis nebulosa strain nnex zinc finger protein Zfx
gene. ).
Length = 784
Score = 30.3 bits (65), Expect = 7.1
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Frame = -2
Query: 414 CSFNGLGFVSLRAETANSGSPVISSRSLKRSKPFGDRYTSV----GHV------RMCGAA 265
C+F+ + VSL+ +T + + + S L+R PF + SV G+V +CG
Sbjct: 135 CNFSTIDVVSLKTDTEKTSAQEMVSLDLERESPFPPKEISVSCTIGNVDTVLKCSICGHL 194
Query: 264 LDSTADLRRY 235
S +DL ++
Sbjct: 195 FSSCSDLEKH 204
>AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polymerase
family, member 4 protein.
Length = 1724
Score = 29.9 bits (64), Expect = 9.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 145 FRMSVSSFEELTTRRRVVHRGTLRCRVVDYQDATSHREMTPH 20
FR VS+ E T ++H+ R + DY+D H T H
Sbjct: 1107 FRTMVSTTELQKTTGTMIHKLAARALIRDYEDGILHENETSH 1148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,580,935
Number of Sequences: 237096
Number of extensions: 1802668
Number of successful extensions: 4258
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4258
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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