Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O22
(744 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 27 0.16
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 26 0.37
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 25 0.48
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 23 2.0
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 23 2.0
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 23 3.4
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 23 3.4
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 3.4
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 22 4.5
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 22 4.5
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 27.1 bits (57), Expect = 0.16
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 503 VVKYKLDLMRKRLETEERDATSRASFKCPACGKTFT 610
V+ +++ + L+ R T FKC CG+ FT
Sbjct: 138 VICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFT 173
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 25.8 bits (54), Expect = 0.37
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = +2
Query: 539 LETEERDATSRASFKCPACGKTFT---DLEADQLYDMATQEFQCTFC 670
L+ ER T F+C C K FT L+ + ++C C
Sbjct: 150 LQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHC 196
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 25.4 bits (53), Expect = 0.48
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 232 RNFSHVTFFRHVSRQFLQ*MAAIEKVK-VVVLGDSGMLISSNFVVVHLL*HIQ 77
+N H+ +HV + L+ + + +++L +G ++ + V HLL H+Q
Sbjct: 88 KNHPHIQLPKHVDQYLLEQLVCEQLGGFLLILTPNGKIVFVSHTVEHLLGHLQ 140
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 551 ERDATSRASFKCPACGKTFT---DLEADQLYDMATQEFQCTFC 670
ER T F+C C K FT L+ + ++C C
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHC 43
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 530 RKRLETEERDATSRASFKCPACGKTFTDLE-ADQLYD 637
RK + E RD A+ +CP F D E D+ Y+
Sbjct: 21 RKHQKQESRDEEYEATDQCPEKYGFFADAEQCDKYYE 57
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 551 ERDATSRASFKCPACGKTF 607
ER T + C CGK F
Sbjct: 99 ERTHTDERPYSCDICGKAF 117
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 512 YKLDLMRKRLETEERDATSRASFKCPACGKTFTDLE 619
Y + +M K + +F+ P+C +TF LE
Sbjct: 229 YTVQIMAKSESSPFESLKKSLNFRTPSCLETFHTLE 264
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 539 LETEERDATSRASFKCPACGKTF 607
L+ R T F CP C K F
Sbjct: 362 LQRHLRTHTGEKRFACPICNKRF 384
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +2
Query: 539 LETEERDATSRASFKCPACGKTFTDLEADQLY---DMATQEFQCTFCSAVVDEDMSALPK 709
L R + F+CP C + F+ + + + ++C C D S L K
Sbjct: 37 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAF-SDSSTLTK 95
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +2
Query: 539 LETEERDATSRASFKCPACGKTFTDLEADQLY---DMATQEFQCTFCSAVVDEDMSALPK 709
L R + F+CP C + F+ + + + ++C C D S L K
Sbjct: 293 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAF-SDSSTLTK 351
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,694
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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