Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O17
(833 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.008
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.008
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.010
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 28 0.092
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.16
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.008
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 370 PGTTIELTCEAAGSPAPSVHW 432
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 29.5 bits (63), Expect = 0.040
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 2/148 (1%)
Frame = +1
Query: 382 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 555
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 782
Query: 556 VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPC 735
Y C V +S+ + ++L +K G+ L C
Sbjct: 783 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 829
Query: 736 RVKGHPKPKITWFNGQNVPIEKNPRMKV 819
V G +TW G + + + +V
Sbjct: 830 EVHGDTPVTVTWLKGGKIELNPSTNYRV 857
Score = 28.3 bits (60), Expect = 0.092
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 634 ELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 771
+ S +L P ++ S+ G V L C G+P P++TW
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 28.3 bits (60), Expect = 0.092
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +1
Query: 400 AAGSPAPSVHWFKN-DSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQDV--YTCL 570
AAG P ++ W K+ SP + + N L ++ + + SS L +T ++ YTC+
Sbjct: 635 AAGDPPLTISWLKDGQSP---FPLPPN-LASANISQLDPYSSLLSITNLAAEHSGDYTCV 690
Query: 571 XXXXXXXXXXXXVVYNTDSATELSERAKL-FPLKPRIVVSYSTYVDNIGNRVVLPCRVKG 747
+ A E+ AKL + PR +V + V L C+ +G
Sbjct: 691 A---------------ANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQG 735
Query: 748 HPKPKITW 771
P P I W
Sbjct: 736 VPTPTIVW 743
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 349 LPSYAHTPGTTIELTCEAAGSPAPSVHW 432
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 727 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSG 831
L C G P I W P+ P + +VLR+G
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNG 85
Score = 22.6 bits (46), Expect = 4.6
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +1
Query: 307 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 444
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.008
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 370 PGTTIELTCEAAGSPAPSVHW 432
PG + L C AAG+P P V W
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTW 455
Score = 29.5 bits (63), Expect = 0.040
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 2/148 (1%)
Frame = +1
Query: 382 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 555
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 778
Query: 556 VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPC 735
Y C V +S+ + ++L +K G+ L C
Sbjct: 779 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 825
Query: 736 RVKGHPKPKITWFNGQNVPIEKNPRMKV 819
V G +TW G + + + +V
Sbjct: 826 EVHGDTPVTVTWLKGGKIELNPSTNYRV 853
Score = 28.3 bits (60), Expect = 0.092
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 634 ELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 771
+ S +L P ++ S+ G V L C G+P P++TW
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 26.2 bits (55), Expect = 0.37
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 628 ATELSERAKLFP-LKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 771
A E+S +L + PR +V + V L C+ +G P P I W
Sbjct: 691 AAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVW 739
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 349 LPSYAHTPGTTIELTCEAAGSPAPSVHW 432
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 727 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSG 831
L C G P I W P+ P + +VLR+G
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNG 85
Score = 22.6 bits (46), Expect = 4.6
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +1
Query: 307 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 444
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.010
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 388 LTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 513
+ C AG P P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
Score = 30.7 bits (66), Expect = 0.017
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 709 IGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRMKVLRSG 831
+G+ V + C V G P P + W NG ++ P ++V G
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDG 365
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/34 (23%), Positives = 14/34 (41%)
Frame = +1
Query: 670 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 771
P + V+ + + C V G P P++ W
Sbjct: 402 PEVKVTPRFQAKRLKEEANIRCHVAGEPLPRVQW 435
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 28.3 bits (60), Expect = 0.092
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 370 PGTTIELTCEAAGSPAPSVHW---FKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTR 540
PG ++ L C A+G+P P + W K S V ++ S ISS T
Sbjct: 407 PGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISS----TH 462
Query: 541 TTSQDVYTCL 570
T +Y C+
Sbjct: 463 TNDGGLYKCI 472
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 712 GNRVVLPCRVKGHPKPKITWFNGQNVPIEKNPRMK-VLRSG 831
G V+ C+ +G+P+P I W + P ++ VL +G
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNG 58
Score = 27.5 bits (58), Expect = 0.16
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 721 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSG 831
V LPC G P P++TW + ++ + R++ L G
Sbjct: 1294 VKLPCLAVGVPAPEVTW-KVRGAVLQSSDRLRQLPEG 1329
Score = 27.1 bits (57), Expect = 0.21
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
Frame = +1
Query: 382 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD- 555
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVEDS 282
Query: 556 -VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLP 732
Y C+ V T L+ A PL I ST + G
Sbjct: 283 GKYLCIVNNS---------VGGESVETVLTVTA---PLGAEI--EPSTQTIDFGRPATFT 328
Query: 733 CRVKGHPKPKITWF-NGQNVPIEK 801
C V+G+P ++W +G+ + +E+
Sbjct: 329 CNVRGNPIKTVSWLKDGKPLGLEE 352
Score = 26.6 bits (56), Expect = 0.28
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 373 GTTIELTCEAAGSPAPSVHWFKND 444
GT + C+A G+P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 26.6 bits (56), Expect = 0.28
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 712 GNRVVLPCRVKGHPKPKITW 771
G+ + C+ G PKP++TW
Sbjct: 693 GSDARVECKADGFPKPQVTW 712
Score = 26.2 bits (55), Expect = 0.37
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 373 GTTIELTCEAAGSPAPSVHWFKNDSPV 453
G TC G+P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 26.2 bits (55), Expect = 0.37
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 670 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 771
P+I +++ G + L C G+P P+ITW
Sbjct: 394 PQIRQAFAEETLQPGPSMFLKCVASGNPTPEITW 427
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 361 AHTPGTTIELTCEAAGSPAPSVHWFK--NDSP 450
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 382 IELTCEAAGSPAPSVHW 432
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.5 bits (58), Expect = 0.16
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 709 IGNRVVLPCRVKGHPKPKITW 771
+G ++ C G P+P+ITW
Sbjct: 36 LGRKITFFCMATGFPRPEITW 56
Score = 27.1 bits (57), Expect = 0.21
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 373 GTTIELTCEAAGSPAPSVHWFKNDSPVYEY 462
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,027
Number of Sequences: 438
Number of extensions: 4102
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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