Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O16
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 130 1e-30
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 130 1e-30
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 110 8e-25
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 110 8e-25
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 110 8e-25
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 110 8e-25
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 104 5e-23
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 104 5e-23
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 42 4e-04
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 38 0.006
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 38 0.006
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 36 0.034
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 36 0.034
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 35 0.060
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 35 0.060
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.079
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 33 0.14
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 33 0.18
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 33 0.24
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z68159-11|CAI79134.1| 117|Caenorhabditis elegans Hypothetical p... 32 0.32
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 32 0.32
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 31 0.56
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 31 0.56
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 31 0.56
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 31 0.74
Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 0.98
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 0.98
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 30 1.7
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 29 3.0
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 29 3.0
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 29 3.0
AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical ... 29 3.0
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 29 3.0
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.9
AF077539-3|AAC26291.1| 310|Caenorhabditis elegans Hypothetical ... 29 3.9
AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical ... 29 3.9
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 5.2
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 5.2
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 5.2
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 28 5.2
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 28 5.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 27 9.1
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 9.1
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 27 9.1
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 27 9.1
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 76/174 (43%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Frame = +2
Query: 140 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 320 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 499
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 500 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTLEEEDKXKK 658
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L+EED KK
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEEDTEKK 187
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 130 bits (313), Expect = 1e-30
Identities = 76/174 (43%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Frame = +2
Query: 140 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 320 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 499
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 500 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTLEEEDKXKK 658
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L+EED KK
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEEDTEKK 187
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 110 bits (265), Expect = 8e-25
Identities = 68/180 (37%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Frame = +2
Query: 146 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 325
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 326 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR 502
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 503 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXK-----KPDW 667
GKFVKPTLKKVSKY+NKF + + NFRN LKVVKK+ E K K KP+W
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKETDLDEIMAKKKGTADGKPEW 210
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 110 bits (265), Expect = 8e-25
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Frame = +2
Query: 140 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 320 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 496
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 497 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK--KEFTLEEEDKXKKPD 664
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK E + + K KPD
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKKDVMEAIVNVKKKDDKPD 196
Query: 665 W 667
W
Sbjct: 197 W 197
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 110 bits (265), Expect = 8e-25
Identities = 68/180 (37%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Frame = +2
Query: 146 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 325
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 326 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR 502
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 503 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXK-----KPDW 667
GKFVKPTLKKVSKY+NKF + + NFRN LKVVKK+ E K K KP+W
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKETDLDEIMAKKKGTADGKPEW 210
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 110 bits (265), Expect = 8e-25
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Frame = +2
Query: 140 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 320 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 496
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 497 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK--KEFTLEEEDKXKKPD 664
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK E + + K KPD
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKKDVMEAIVNVKKKDDKPD 196
Query: 665 W 667
W
Sbjct: 197 W 197
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 104 bits (250), Expect = 5e-23
Identities = 64/182 (35%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Frame = +2
Query: 140 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 320 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 496
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 497 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKKE-FT-LEEEDKXKKP 661
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK VKK+ FT + + K KP
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKP 208
Query: 662 DW 667
+W
Sbjct: 209 EW 210
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 104 bits (250), Expect = 5e-23
Identities = 64/182 (35%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Frame = +2
Query: 140 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 319
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 320 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 496
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 497 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKKE-FT-LEEEDKXKKP 661
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK VKK+ FT + + K KP
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKESVFTQIANKKKSDKP 208
Query: 662 DW 667
+W
Sbjct: 209 EW 210
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Frame = +2
Query: 344 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS---QV--NDLRGK 508
N + + +K K+ H+RI +LE EK+DLE +R++ ++ +LN QV N K
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNERQRQVTRNSALKK 1102
Query: 509 FVKPTLKKVSKYENK---FAKLQKKAAEFNFRNQLKVVKKK 622
+ P ++Y K +K ++ NFR + V K+
Sbjct: 1103 GIDPAEVGNTRYPAKVQIVSKYDRQVDRRNFRERRSVFDKR 1143
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 335 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL-RGKF 511
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 184
Query: 512 VKPTL 526
+K L
Sbjct: 185 LKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 335 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL-RGKF 511
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 288
Query: 512 VKPTL 526
+K L
Sbjct: 289 LKKGL 293
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 487
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 487
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 34.7 bits (76), Expect = 0.060
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS-QVNDLRGKFVKPTLKKVSKYE 547
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGLDPEEAAS 291
Query: 548 NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXKK 658
+ A++F+ + + + + E ++ K+
Sbjct: 292 SVHPPKITTASKFDRQTDRRSYGDRRYLFENPEEEKQ 328
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 34.7 bits (76), Expect = 0.060
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS-QVNDLRGKFVKPTLKKVSKYE 547
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGLDPEEAAS 291
Query: 548 NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXKK 658
+ A++F+ + + + + E ++ K+
Sbjct: 292 SVHPPKITTASKFDRQTDRRSYGDRRYLFENPEEEKQ 328
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 34.3 bits (75), Expect = 0.079
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 344 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 478
N + + +K K+ H+RI +LE EK+DLE +R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 577
E I L K + E ++K+KD+E+S + S++ D V +++ + + +L+++
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED-EQSLVAKLQRQIKELLARIQELEEEL 1132
Query: 578 -AEFNFRNQL-KVVKKKEFTLEE 640
AE N R++ K + + LEE
Sbjct: 1133 DAERNSRSKAEKARNEMQMELEE 1155
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +2
Query: 362 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS- 538
ED + R+C+ Y + + R+ + + +LEY K K+ + + + + + K + L K++
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY-EKEKNRALQETINNSSSVDSKINQEKLNKINN 729
Query: 539 -KYENKFAKLQKKAAEFNFRNQLKVVK 616
K K +L K + N +N + ++K
Sbjct: 730 DKKARKNYELNKIESIINKKN-MDIIK 755
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 32.7 bits (71), Expect = 0.24
Identities = 32/110 (29%), Positives = 48/110 (43%)
Frame = +2
Query: 335 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 514
K + +D +D K KD E + ED+K D K KD + + K
Sbjct: 105 KEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKED----EKEKDDDKKEDKKDDKKSDNKDD 160
Query: 515 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXKKPD 664
K KK K ++K K ++K E + + K +KKE EEE K +K +
Sbjct: 161 KDDEKKEEKKDDKEEKKEEKKEE---KKEEKKEEKKEEKKEEEKKEEKKE 207
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2
Query: 443 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 553
+++ K+ EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 435 LLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 470
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2
Query: 443 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 553
+++ K+ EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 437 LLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
>Z68159-11|CAI79134.1| 117|Caenorhabditis elegans Hypothetical
protein C33D9.10 protein.
Length = 117
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 431 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK-LQKKAAEFNFRNQLK 607
D E+++ + D+E + +++NDL K +K+ + + + K L+ E N+
Sbjct: 22 DSEHVINQMDLENQNHKNKMNDLSPDEKKAEIKEYRETDLRLEKQLKSPIKETRLLNRTM 81
Query: 608 VVKKKEFTLEEEDKXKKPDW 667
+ + ++ EE KK W
Sbjct: 82 MARVEQIDKNEEANAKKSYW 101
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2
Query: 443 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 553
+++ K+ EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 437 LLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL------RGKFVKPTLKK 532
++R KD RI+ LE+E + + D SDL ++ +L +G ++
Sbjct: 1113 LQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEV 1172
Query: 533 VSKYENKFAKLQK--KAAEFNFRNQLKVVKKK 622
K E + AKL++ + A N NQL ++KK
Sbjct: 1173 NKKREAELAKLRRDLEEANMNHENQLGGLRKK 1204
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL------RGKFVKPTLKK 532
++R KD RI+ LE+E + + D SDL ++ +L +G ++
Sbjct: 1113 LQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEV 1172
Query: 533 VSKYENKFAKLQK--KAAEFNFRNQLKVVKKK 622
K E + AKL++ + A N NQL ++KK
Sbjct: 1173 NKKREAELAKLRRDLEEANMNHENQLGGLRKK 1204
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 371 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL------RGKFVKPTLKK 532
++R KD RI+ LE+E + + D SDL ++ +L +G ++
Sbjct: 1116 LQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEV 1175
Query: 533 VSKYENKFAKLQK--KAAEFNFRNQLKVVKKK 622
K E + AKL++ + A N NQL ++KK
Sbjct: 1176 NKKREAELAKLRRDLEEANMNHENQLGGLRKK 1207
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.74
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 514
+PK ++ E + K KD + A+ ED+K D + K++D + D + + +
Sbjct: 68 EPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKK-DDKKDDKKEEKKEEK 126
Query: 515 KPTLKKVSKYENKFAKLQKKAA--EFNFRNQLKVVKKKEFTLEEEDKXKKPD 664
K K+ + + K KK+ + + + K +KKE EE+ + KK D
Sbjct: 127 KEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKED 178
>Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical
protein R186.7 protein.
Length = 359
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 419 DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRN 598
D K E I K K+ E D + L + TL K E K + +K+
Sbjct: 137 DSKGREEKIEKLKETENKDSKQRNRRLFSNLIMGTLSSFKKTEKKTTQQEKQE---EVEK 193
Query: 599 QLKVVKKKEFTLEEEDK 649
+L+ KKK+F +E+K
Sbjct: 194 KLEETKKKDFESRKEEK 210
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/104 (23%), Positives = 52/104 (50%)
Frame = +2
Query: 350 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 529
D+++E+ ++ K +++ + + EK + + E SD + + K T K
Sbjct: 93 DESDEEEDRKKSKS-KKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKS--KKTKK 149
Query: 530 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXKKP 661
+ S ++ ++ ++K + +N+ K VKK+ T EE D+ +KP
Sbjct: 150 QTSSESSEESEEERKVKKSK-KNKEKSVKKRAETSEESDEDEKP 192
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +2
Query: 398 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 577
E +++ K + E VK++ E S+ S ++ K K LKK +K E++ +K
Sbjct: 160 EEERKVKKSKKNKEKSVKKR-AETSE-ESDEDEKPSKKSKKGLKKKAKSESESESEDEKE 217
Query: 578 AEFNFRNQLKVVKKKEFTLEEEDKXKKPD 664
+ + + KVVKK+ + +E + KK +
Sbjct: 218 VKKSKKKSKKVVKKESESEDEAPEKKKTE 246
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/104 (23%), Positives = 52/104 (50%)
Frame = +2
Query: 350 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 529
D+++E+ ++ K +++ + + EK + + E SD + + K T K
Sbjct: 93 DESDEEEDRKKSKS-KKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKS--KKTKK 149
Query: 530 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXKKP 661
+ S ++ ++ ++K + +N+ K VKK+ T EE D+ +KP
Sbjct: 150 QTSSESSEESEEERKVKKSK-KNKEKSVKKRAETSEESDEDEKP 192
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/89 (26%), Positives = 45/89 (50%)
Frame = +2
Query: 398 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 577
E +++ K + E VK++ E S+ S ++ K K LKK +K E++ +K
Sbjct: 160 EEERKVKKSKKNKEKSVKKR-AETSE-ESDEDEKPSKKSKKGLKKKAKSESESESEDEKE 217
Query: 578 AEFNFRNQLKVVKKKEFTLEEEDKXKKPD 664
+ + + KVVKK+ + +E + KK +
Sbjct: 218 VKKSKKKSKKVVKKESESEDEAPEKKKTE 246
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 500 RGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTL 634
RGKFV+P + ++ K+ K KL+K + KV+K+KE L
Sbjct: 649 RGKFVRPLMPRIPKFVAKKKKLKKVDGK-------KVLKRKEIVL 686
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.5 bits (63), Expect = 2.3
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +2
Query: 341 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 517
K D ED K KD ++ + + DEK D E +KD + + + D + + K
Sbjct: 96 KKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSK 155
Query: 518 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEE--DKXKKPD 664
+ K ++K +K +KK E + K KK+ E+E D KK D
Sbjct: 156 KSKKSSKSKKSKKSKREKKDEE-KKEDDKKEDDKKDDKKEDEKKDDDKKDD 205
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +2
Query: 344 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 523
N+D + K VC D + + + ++ DL+ ++++ ++ D +S N VK +
Sbjct: 97 NLDIQTNELEKTVCDDLPQTVTQYVNQFPDLKKKIEKRGRKLVDYDSAKNSFNS--VKAS 154
Query: 524 LKKVSKYENKFAKLQKKAAE 583
KK + + A ++ +AAE
Sbjct: 155 SKKDNDPKLAKATMELQAAE 174
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +2
Query: 368 TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN-DLRGKFVKPTLKKVSKY 544
T KR+ + YH I L++ + Y +KRK + + + ++N +L+ K V+ +
Sbjct: 200 TTKRLMEHYHIEIDNLKEAHSEEMYKIKRKYSTLEEYSEEINWELKLK-VENLGNLEMNF 258
Query: 545 ENKFAKLQK--------KAAEFNFRNQLKVVKKKEFTLEEEDKXKK 658
E + LQ K++E +L +K E EEE K K+
Sbjct: 259 ETVYQDLQTANDNMEKYKSSESERIQKLLEEQKAEILKEEEIKRKE 304
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 410 RLEDEKFDLEYIVKRKDMEISDLNSQVNDL--RGKFVKPTLKKVSKYENKFAKLQKKAAE 583
+L+D + D++ +K +EI + +++ R K + +KK+ E + ++ E
Sbjct: 756 QLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIE 815
Query: 584 FNFRNQLKV-VKKKEFTLEEE 643
F+ +L V +KK+E T+ +
Sbjct: 816 NTFKEKLSVSLKKQEDTIRRQ 836
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 410 RLEDEKFDLEYIVKRKDMEISDLNSQVNDL--RGKFVKPTLKKVSKYENKFAKLQKKAAE 583
+L+D + D++ +K +EI + +++ R K + +KK+ E + ++ E
Sbjct: 756 QLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIE 815
Query: 584 FNFRNQLKV-VKKKEFTLEEE 643
F+ +L V +KK+E T+ +
Sbjct: 816 NTFKEKLSVSLKKQEDTIRRQ 836
>AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical
protein ZC190.5 protein.
Length = 311
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = -1
Query: 555 NLFSYLETFFSVGLTN--LPLRSLTWEFRSEISI---SFLLTMYSRSNFXXXXXXXXXXX 391
++F YL + LT LRS TWEF E + S + ++S +
Sbjct: 54 SIFEYLNSSKYYALTPEFATLRSKTWEFIHEFGVCLQSLSMLLFSMERYSAIRYPDFHAS 113
Query: 390 SLQTLLIVSSLASSMFLGL 334
+ +LI S+ S++FL L
Sbjct: 114 TTFVVLIYVSIVSAVFLAL 132
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 410 RLEDEKFDLEYIVKRKDMEISDLNSQVNDL--RGKFVKPTLKKVSKYENKFAKLQKKAAE 583
+L+D + D++ +K +EI + +++ R K + +KK+ E + ++ E
Sbjct: 754 QLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIE 813
Query: 584 FNFRNQLKV-VKKKEFTLEEE 643
F+ +L V +KK+E T+ +
Sbjct: 814 NTFKEKLSVSLKKQEDTIRRQ 834
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 350 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 523
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 350 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 523
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 350 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 523
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 446 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 350 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 523
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>AF077539-3|AAC26291.1| 310|Caenorhabditis elegans Hypothetical
protein T25D3.2 protein.
Length = 310
Score = 28.7 bits (61), Expect = 3.9
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +2
Query: 341 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLE-YIVKRKDMEISDLNSQ-VNDLRGKFV 514
KN+ +E K + ER RL DE F L+ YI++ K++ DL+S+ N L+ + +
Sbjct: 138 KNVVLYSEILDKYIKVTVTERAMRLIDEHFGLDYYILESKEI---DLDSKFANSLKREML 194
Query: 515 KPTLKKVSKYE---NKFAKLQKKAAEF 586
TL S YE K A +++K A+F
Sbjct: 195 L-TLTTESYYEENDEKKAYIKEKYADF 220
>AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical
protein T23B12.5 protein.
Length = 224
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 516 LTNLPLRSLTWEFRSEISISFLLTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLG 337
L NLPL + W F S S+ L + R + L+ L++SS+ ++FL
Sbjct: 39 LLNLPLERIFWNFLSLSSVPLQLFVVLR-QYMLTFSTSNKLQLLRITLVISSVFQTLFLT 97
Query: 336 L 334
L
Sbjct: 98 L 98
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 350 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 478
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 350 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 478
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 350 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 478
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 407 ARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 568
A +EDE+ +RK E D+ ++ DLR K + T K+ K EN LQ
Sbjct: 8 AIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMT-KQFDKSENDIKSLQ 60
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 407 ARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 568
A +EDE+ +RK E D+ ++ DLR K + T K+ K EN LQ
Sbjct: 16 AIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMT-KQFDKSENDIKSLQ 68
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.2
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +2
Query: 341 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 517
K D ED K KD ++ + + DEK D E +KD + + + + K K
Sbjct: 96 KKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKK 155
Query: 518 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEE--DKXKKPD 664
+ K SK + K + K + + K KK++ ++E D KK D
Sbjct: 156 SSKSKKSKKSKREKKDEDKKEDDKKEDDKKDDKKEDDKKDDEKKDDDKKDD 206
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 455 KDMEISDLNSQV-NDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRN 598
K +IS+L+ QV +D+ KF T+K + Y K KL + +F N
Sbjct: 183 KISKISELSKQVCDDISDKFA-ATIKSLQNYFEKHEKLSPPGRKTHFNN 230
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 341 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 520
+N+ +KRV K + + + D K DL IVK++ E + + KF+K
Sbjct: 200 RNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLLKIVKQQKPEAQSVRDESAQAISKFIKE 259
Query: 521 TLKKVSKYENK 553
Y ++
Sbjct: 260 KYVNAKIYASR 270
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 416 EDEKFDLEY-----IVKRKDMEISDLNSQVNDLRGKFVKPTLKK 532
E+E F+ ++ IV+ K + ISD+ + D KF+K LKK
Sbjct: 336 EEEYFEKQHNQFRRIVQAKHLAISDICDENCDYSDKFIKSALKK 379
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 416 EDEKFDLEY-----IVKRKDMEISDLNSQVNDLRGKFVKPTLKK 532
E+E F+ ++ IV+ K + ISD+ + D KF+K LKK
Sbjct: 336 EEEYFEKQHNQFRRIVQAKHLAISDICDENCDYSDKFIKSALKK 379
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 467 ISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEED 646
ISD ++ D +G+ V T KK+ KY K + + + ++K++K+K+ L D
Sbjct: 2598 ISDPTPRLPDDQGESVAITKKKIFKYGEK----RDTPDDEDENEEIKLLKRKQLYLGARD 2653
Query: 647 K 649
K
Sbjct: 2654 K 2654
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +2
Query: 359 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDME--ISDLNSQVNDLRGKFVKPTLKK 532
NED + D +A +E + D +E + ++ +V ++ K + K+
Sbjct: 21 NEDNV-----DLESDVAEMEGAELDRVKRASDHKLEKKLDEIMEKVEKIKDKIEENKEKR 75
Query: 533 VSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKXKK 658
K + K K + E +++ K KKK EEE+ KK
Sbjct: 76 EKKNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEEDKKK 117
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 473 DLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDK 649
D+ + +ND KF + K K E A+ + ++ +N +NQ++ +K L+E+DK
Sbjct: 542 DIEAMINDAE-KFAEDDKKVKDKAE---ARNELESYAYNLKNQIEDKEKLGGKLDEDDK 596
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 341 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND-LRGKFVK 517
KN N D K + D+H+ +++ + + LEYI +I + S+ N + GKF
Sbjct: 171 KNASILNLDC-KYLPADFHQHLSKFKHLEIKLEYISNEDIDKIKKMISEPNSIMNGKFKS 229
Query: 518 PT 523
T
Sbjct: 230 ST 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,151,700
Number of Sequences: 27780
Number of extensions: 182789
Number of successful extensions: 981
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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