Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O15
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 155 2e-37
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 155 2e-37
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 154 4e-37
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 40 0.014
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 40 0.014
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 40 0.014
AL589765-15|CAI17176.1| 557|Homo sapiens tudor and KH domain co... 39 0.018
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 34 0.51
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 33 1.2
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 33 1.2
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 33 1.2
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 33 1.2
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 33 1.2
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 33 1.2
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 32 2.7
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 32 2.7
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 32 2.7
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 32 2.7
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 31 6.3
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 31 6.3
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 31 6.3
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 31 6.3
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 31 6.3
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 31 6.3
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 31 6.3
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 31 6.3
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 31 6.3
BC146755-1|AAI46756.1| 1321|Homo sapiens SPAG9 protein protein. 30 8.4
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 30 8.4
AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein. 30 8.4
AY850123-1|AAX47276.1| 1307|Homo sapiens sperm associated antige... 30 8.4
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 30 8.4
AY236487-1|AAP74807.1| 766|Homo sapiens proliferation-inducing ... 30 8.4
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 30 8.4
AK024068-1|BAB14812.1| 734|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF542172-1|AAQ11383.1| 508|Homo sapiens HLC-6 protein. 30 8.4
AF327452-1|AAN61565.1| 1311|Homo sapiens JNK-associated leucine-... 30 8.4
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 30 8.4
AB011088-1|BAA25442.3| 1382|Homo sapiens KIAA0516 protein protein. 30 8.4
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 155 bits (376), Expect = 2e-37
Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
Frame = +2
Query: 194 VPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRNIQQAT---NKLR-VGSSLHTQV 361
VP ++ E + Y D FP LP ++ + A NK+R + +S+ TQV
Sbjct: 20 VPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPAGAWGNKIRPIKASVITQV 79
Query: 362 FHVPYEERKLDNANTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEA 541
FHVP EERK + N FGEGE + C I + TGAH+E+S +KD L+ +++GK AV++A
Sbjct: 80 FHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKA 139
Query: 542 RRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNSXXXXXX 721
R+ I+ Q QAS ++IPKEH+R+++GK G+KL++LE TATKI +P D S
Sbjct: 140 RKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKIT 199
Query: 722 XXXXXXXXAEHEIRVCSEEQSXKAL 796
A HE+ + S EQ +A+
Sbjct: 200 GTKEGIEKARHEVLLISAEQDKRAV 224
Score = 37.9 bits (84), Expect = 0.042
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 407 FGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEARRQILTHFQQQASK- 583
F G R I ++TG I I + TG++ + +A +I ++++ K
Sbjct: 236 FIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKT 295
Query: 584 ---QISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
+ + K +++++G +G L+E+ + T + +P
Sbjct: 296 TTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIP 332
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 368 VPYEERKLDNANTFG-EGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEAR 544
+ E +K + G +G SL+ I + TG +EI S S T ++ G+ + +A
Sbjct: 298 IAVEVKKSQHKYVIGPKGNSLQ---EILERTGVSVEIPPSDSISETVILRGEPEKLGQAL 354
Query: 545 RQILTHFQQQASKQISIPKEHYRWILGKQGQKLKEL 652
++ ++ P +R+I+GK+GQ L ++
Sbjct: 355 TEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKI 390
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 578 SKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
S IS+P K+ ++ I+GK G +K++ + + TKI++P + NS
Sbjct: 581 SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNS 624
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 155 bits (376), Expect = 2e-37
Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
Frame = +2
Query: 194 VPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRNIQQAT---NKLR-VGSSLHTQV 361
VP ++ E + Y D FP LP ++ + A NK+R + +S+ TQV
Sbjct: 20 VPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPAGAWGNKIRPIKASVITQV 79
Query: 362 FHVPYEERKLDNANTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEA 541
FHVP EERK + N FGEGE + C I + TGAH+E+S +KD L+ +++GK AV++A
Sbjct: 80 FHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKA 139
Query: 542 RRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNSXXXXXX 721
R+ I+ Q QAS ++IPKEH+R+++GK G+KL++LE TATKI +P D S
Sbjct: 140 RKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKIT 199
Query: 722 XXXXXXXXAEHEIRVCSEEQSXKAL 796
A HE+ + S EQ +A+
Sbjct: 200 GTKEGIEKARHEVLLISAEQDKRAV 224
Score = 37.9 bits (84), Expect = 0.042
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 407 FGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEARRQILTHFQQQASK- 583
F G R I ++TG I I + TG++ + +A +I ++++ K
Sbjct: 236 FIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKT 295
Query: 584 ---QISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
+ + K +++++G +G L+E+ + T + +P
Sbjct: 296 TTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIP 332
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 368 VPYEERKLDNANTFG-EGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEAR 544
+ E +K + G +G SL+ I + TG +EI S S T ++ G+ + +A
Sbjct: 298 IAVEVKKSQHKYVIGPKGNSLQ---EILERTGVSVEIPPSDSISETVILRGEPEKLGQAL 354
Query: 545 RQILTHFQQQASKQISIPKEHYRWILGKQGQKLKEL 652
++ ++ P +R+I+GK+GQ L ++
Sbjct: 355 TEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKI 390
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 578 SKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
S IS+P K+ ++ I+GK G +K++ + + TKI++P + NS
Sbjct: 581 SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNS 624
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 154 bits (373), Expect = 4e-37
Identities = 80/205 (39%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
Frame = +2
Query: 194 VPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRNIQQAT---NKLR-VGSSLHTQV 361
VP ++ E + Y D FP LP ++ + + NK+R + +S+ TQV
Sbjct: 20 VPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPSGAWGNKIRPIKASVITQV 79
Query: 362 FHVPYEERKLDNANTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEA 541
FHVP EERK + N FGEGE + C I + TGAH+E+S +KD L+ +++GK AV++A
Sbjct: 80 FHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKA 139
Query: 542 RRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNSXXXXXX 721
R+ I+ Q QAS ++IPKEH+R+++GK G+KL++LE TATKI +P D S
Sbjct: 140 RKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKIT 199
Query: 722 XXXXXXXXAEHEIRVCSEEQSXKAL 796
A HE+ + S EQ +A+
Sbjct: 200 GTKEGIEKARHEVLLISAEQDKRAV 224
Score = 37.9 bits (84), Expect = 0.042
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 407 FGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEARRQILTHFQQQASK- 583
F G R I ++TG I I + TG++ + +A +I ++++ K
Sbjct: 236 FIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKT 295
Query: 584 ---QISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
+ + K +++++G +G L+E+ + T + +P
Sbjct: 296 TTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIP 332
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 368 VPYEERKLDNANTFG-EGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEAR 544
+ E +K + G +G SL+ I + TG +EI S S T ++ G+ + +A
Sbjct: 298 IAVEVKKSQHKYVIGPKGNSLQ---EILERTGVSVEIPPSDSISETVILRGEPEKLGQAL 354
Query: 545 RQILTHFQQQASKQISIPKEHYRWILGKQGQKLKEL 652
++ ++ P +R+I+GK+GQ L ++
Sbjct: 355 TEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKI 390
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 578 SKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
S IS+P K+ ++ I+GK G +K++ + + TKI++P + NS
Sbjct: 581 SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNS 624
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 39.5 bits (88), Expect = 0.014
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 443 ITKDTGAHIEISTSKDGS-LTFLITGKQSAVLEAR---RQILTHFQQQASKQISIPKEHY 610
+ K TGA I++ T G LI+G V +A+ QILT S+Q+S+P+
Sbjct: 78 LRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTE-NTPVSEQLSVPQRSV 136
Query: 611 RWILGKQGQKLKELEKVTATKI 676
I+G+ G+ ++ + K + KI
Sbjct: 137 GRIIGRGGETIRSICKASGAKI 158
Score = 34.3 bits (75), Expect = 0.51
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 536 EARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
E+R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 39 ESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 39.5 bits (88), Expect = 0.014
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 443 ITKDTGAHIEISTSKDGS-LTFLITGKQSAVLEAR---RQILTHFQQQASKQISIPKEHY 610
+ K TGA I++ T G LI+G V +A+ QILT S+Q+S+P+
Sbjct: 78 LRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTE-NTPVSEQLSVPQRSV 136
Query: 611 RWILGKQGQKLKELEKVTATKI 676
I+G+ G+ ++ + K + KI
Sbjct: 137 GRIIGRGGETIRSICKASGAKI 158
Score = 34.3 bits (75), Expect = 0.51
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 536 EARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
E+R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 39 ESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 39.5 bits (88), Expect = 0.014
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 443 ITKDTGAHIEISTSKDGS-LTFLITGKQSAVLEAR---RQILTHFQQQASKQISIPKEHY 610
+ K TGA I++ T G LI+G V +A+ QILT S+Q+S+P+
Sbjct: 78 LRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTE-NTPVSEQLSVPQRSV 136
Query: 611 RWILGKQGQKLKELEKVTATKI 676
I+G+ G+ ++ + K + KI
Sbjct: 137 GRIIGRGGETIRSICKASGAKI 158
Score = 34.3 bits (75), Expect = 0.51
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 536 EARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
E+R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 39 ESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AL589765-15|CAI17176.1| 557|Homo sapiens tudor and KH domain
containing protein.
Length = 557
Score = 39.1 bits (87), Expect = 0.018
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +2
Query: 449 KDTGAHIEISTSKDGS-LTFLITGKQSAVLEAR---RQILTHFQQQASKQISIPKEHYRW 616
K TGA I++ T G LI+G V +A+ QILT S+Q+S+P+
Sbjct: 76 KQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTE-NTPVSEQLSVPQRSVGR 134
Query: 617 ILGKQGQKLKELEKVTATKI 676
I+G+ G+ ++ + K + KI
Sbjct: 135 IIGRGGETIRSICKASGAKI 154
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 34.3 bits (75), Expect = 0.51
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 536 EARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
E+R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 39 ESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDGSLT---FLITGKQSAVLEARRQILTHFQQQASKQ 586
G+ T +ITK T + ++I ++ I EA R IL Q++A +
Sbjct: 209 GKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQKEADET 268
Query: 587 I---SIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISDNS 703
IP + H + +GK+G+ LK++E T TKI + + D S
Sbjct: 269 KLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS 316
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 578 SKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
S IS+P K+ ++ I+GK G +K++ + + TKI++P + NS
Sbjct: 211 SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNS 254
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 578 SKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
S IS+P K+ ++ I+GK G +K++ + + TKI++P + NS
Sbjct: 78 SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNS 121
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 578 SKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
S IS+P K+ ++ I+GK G +K++ + + TKI++P + NS
Sbjct: 264 SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNS 307
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 449 KDTGAHIEISTSKDGSLTFLITGKQSAVLEARRQILTHFQQQASK----QISIPKEHYRW 616
++TG I I + TG++ + +A +I ++++A+ ++ P +R+
Sbjct: 2 QETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKANSFTVSSVAAPSWLHRF 61
Query: 617 ILGKQGQKLKEL 652
I+GK+GQ L ++
Sbjct: 62 IIGKKGQNLAKI 73
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDGSLT---FLITGKQSAVLEARRQILTHFQQQASKQ 586
G+ T +ITK T + ++I ++ I EA R IL Q++A +
Sbjct: 209 GKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQKEADET 268
Query: 587 I---SIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISDNS 703
IP + H + +GK+G+ LK++E T TKI + + D S
Sbjct: 269 KLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS 316
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDGSLT---FLITGKQSAVLEARRQILTHFQQQASKQ 586
G+ T +ITK T + ++I ++ I EA R IL Q++A +
Sbjct: 210 GKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQKEADET 269
Query: 587 I---SIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISDNS 703
IP + H + +GK+G+ LK++E T TKI + + D S
Sbjct: 270 KLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS 317
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 31.9 bits (69), Expect = 2.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDG-----SLTFLITGK-QSAVLEARRQILTHFQQQA 577
G+ T +ITK T + I++ ++ S+T L T + SA ++ +I+ Q
Sbjct: 212 GKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAACKSILEIMHKEAQDI 271
Query: 578 SKQISIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISD 697
IP + H ++ +GK+G+ LK++E+ T TKI + + +
Sbjct: 272 KFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 31.9 bits (69), Expect = 2.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDG-----SLTFLITGK-QSAVLEARRQILTHFQQQA 577
G+ T +ITK T + I++ ++ S+T L T + SA ++ +I+ Q
Sbjct: 212 GKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAACKSILEIMHKEAQDI 271
Query: 578 SKQISIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISD 697
IP + H ++ +GK+G+ LK++E+ T TKI + + +
Sbjct: 272 KFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 31.9 bits (69), Expect = 2.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDG-----SLTFLITGK-QSAVLEARRQILTHFQQQA 577
G+ T +ITK T + I++ ++ S+T L T + SA ++ +I+ Q
Sbjct: 212 GKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAACKSILEIMHKEAQDI 271
Query: 578 SKQISIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISD 697
IP + H ++ +GK+G+ LK++E+ T TKI + + +
Sbjct: 272 KFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 31.9 bits (69), Expect = 2.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Frame = +2
Query: 416 GESLRTCHSITKDTGAHIEISTSKDG-----SLTFLITGK-QSAVLEARRQILTHFQQQA 577
G+ T +ITK T + I++ ++ S+T L T + SA ++ +I+ Q
Sbjct: 212 GKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAACKSILEIMHKEAQDI 271
Query: 578 SKQISIPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISD 697
IP + H ++ +GK+G+ LK++E+ T TKI + + +
Sbjct: 272 KFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQE 317
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 569 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 286 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 323
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 617 ILGKQGQKLKELEKVTATKINVPGISD 697
++GK+G+ LK++E+ T TKI + + D
Sbjct: 152 LIGKEGRNLKKVEQDTETKITISSLQD 178
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 569 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 256 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 293
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 569 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 287 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 324
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 569 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 283 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 320
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 617 ILGKQGQKLKELEKVTATKINVPGISD 697
++GK+G+ LK++E+ T TKI + + D
Sbjct: 291 LIGKEGRNLKKVEQDTETKITISSLQD 317
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 617 ILGKQGQKLKELEKVTATKINVPGISD 697
++GK+G+ LK++E+ T TKI + + D
Sbjct: 291 LIGKEGRNLKKVEQDTETKITISSLQD 317
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 569 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 294 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 331
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 30.7 bits (66), Expect = 6.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 569 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 252 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 289
>BC146755-1|AAI46756.1| 1321|Homo sapiens SPAG9 protein protein.
Length = 1321
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 892 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 948
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 949 SVLPNEQDLVREEAQKMSSLL 969
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 236 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 278
>AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein.
Length = 659
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 491 GSLTFLITGKQSAVLEARRQILTHFQQQASKQISIPK-EHYRWILGKQGQKLKELEKVTA 667
G+ + G+Q+A+L R+ + T ++ + +P EH I+G+QG K+K L T
Sbjct: 211 GAAAAALNGEQAALLR-RKSVNT------TECVPVPSSEHVAEIVGRQGCKIKALRAKTN 263
Query: 668 TKINVP 685
T I P
Sbjct: 264 TYIKTP 269
>AY850123-1|AAX47276.1| 1307|Homo sapiens sperm associated antigen 9
transcript variant 1 protein.
Length = 1307
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 878 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 934
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 935 SVLPNEQDLVREEAQKMSSLL 955
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 284 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
>AY236487-1|AAP74807.1| 766|Homo sapiens proliferation-inducing
gene 6 protein.
Length = 766
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 324 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 380
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 381 SVLPNEQDLVREEAQKMSSLL 401
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 274 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 316
>AK024068-1|BAB14812.1| 734|Homo sapiens protein ( Homo sapiens
cDNA FLJ14006 fis, clone Y79AA1002399, highly similar to
Homo sapiens mRNA for sperm protein. ).
Length = 734
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 528 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 584
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 585 SVLPNEQDLVREEAQKMSSLL 605
>AF542172-1|AAQ11383.1| 508|Homo sapiens HLC-6 protein.
Length = 508
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 66 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 122
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 123 SVLPNEQDLVREEAQKMSSLL 143
>AF327452-1|AAN61565.1| 1311|Homo sapiens JNK-associated
leucine-zipper protein protein.
Length = 1311
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 882 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 938
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 939 SVLPNEQDLVREEAQKMSSLL 959
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 262 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 304
>AB011088-1|BAA25442.3| 1382|Homo sapiens KIAA0516 protein protein.
Length = 1382
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +2
Query: 95 TVTTRRGQGLPEETKMMHQQSMMVGDVI--PVHPDVPMHVEEMNNVGYENNVSFAYDDLF 268
T T G E+T + Q + V P+ +P E+++ V +N S AY D
Sbjct: 953 TEATEGNAGSAEDTVDISQTGVYTEHVFTDPLGVQIP---EDLSPVYQSSNDSDAYKDQI 1009
Query: 269 PALPHSQPLVQRNIQQATNKL 331
LP+ Q LV+ Q+ ++ L
Sbjct: 1010 SVLPNEQDLVREEAQKMSSLL 1030
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,968,524
Number of Sequences: 237096
Number of extensions: 2367595
Number of successful extensions: 5398
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 5130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5398
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -