Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O15
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 92 5e-19
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 32 0.41
U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 32 0.54
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 32 0.54
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 31 0.95
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 31 0.95
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 31 0.95
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 30 1.7
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 29 2.9
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical... 29 3.8
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical p... 28 6.7
AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical ... 28 6.7
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 28 6.7
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 28 8.9
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 91.9 bits (218), Expect = 5e-19
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Frame = +2
Query: 203 HVEEMNNVGYENN-----VSFAYDDLFPALPHSQPLVQRNIQQAT--NKLRVGSSLHTQV 361
H+EE NNV + +SF+Y FP LP + P +Q ++ + S
Sbjct: 5 HIEETNNVEIDPATGGAVMSFSYASDFPTLPDAAPASAPTAKQTHVWSRPTLSKSEVNIT 64
Query: 362 FHVPYEERKLDNANTFGE-GESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLE 538
F + +ER + +FG E + +I T IE+S SKDG LT ++ G+++ E
Sbjct: 65 FRLASDERS-NKVKSFGSTSEESKKAQAIATATKTRIELSESKDGELTVVVKGERAKAEE 123
Query: 539 ARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
AR +I+ Q QAS++I IPK+H+ ++GK+G L+ LE T +I +P
Sbjct: 124 ARARIIRDLQTQASREIDIPKDHHGRLIGKEGALLRNLEAETNCRIQIP 172
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 401 NTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEAR---RQILTHFQQ 571
+ G G SL + I G I I + S ++ GK+ V +A R I+T +
Sbjct: 432 HVIGRGGSLIS--KIKDQHGVQITIPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIEN 489
Query: 572 QASKQISIPKEHYRWILGKQG 634
+ S+ I IP+ ++ I+G +G
Sbjct: 490 EKSRDIIIPQRLHKLIIGSKG 510
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +2
Query: 413 EGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEARRQILTHFQQQA---SK 583
EG LR ++ +T I+I S ITG + + A IL +++A ++
Sbjct: 154 EGALLR---NLEAETNCRIQIPNRDGPSSKITITGPREGIQRAAAHILAVSEREAKLATE 210
Query: 584 QISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
I PK ++ G + + L + KIN+P
Sbjct: 211 HIVCPKNLVAFVRGPKNETYDRLTQNNGVKINIP 244
Score = 32.3 bits (70), Expect = 0.41
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Frame = +2
Query: 467 IEISTSKDGSLTFL-ITGKQSAV---LEARRQILTHFQQQA--------SKQISIPKEHY 610
+ IS KD S + +TG+ V LEA R L ++ QA S I++P +++
Sbjct: 959 VNISIPKDNSSEDITVTGQTENVDQALEALRGKLGEYEAQAEDRKLKQWSMSINVPTDYH 1018
Query: 611 RWILGKQGQKLKELEKVTATKINVP 685
+ I+G++G + L++ INVP
Sbjct: 1019 QKIIGQRGATITALKEKYGVIINVP 1043
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 584 QISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
++S+P I+GK GQ ++EL+++T + +P
Sbjct: 561 EVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIP 594
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 32.3 bits (70), Expect = 0.41
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 584 QISIPKEHYRWILGKQGQKLKELEKVTATKINVP 685
++S+P I+GK GQ ++EL+++T + +P
Sbjct: 685 EVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIP 718
>U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 12 protein.
Length = 348
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -1
Query: 421 FSLTKSISIVKFSFFIWHMENLSVQ*RANSKFVCSLLYITLHKGLGMR 278
F L + S ++F+ F+W+M L + + F+C+L+ + +HK L R
Sbjct: 175 FILVPATSALQFNSFLWYMLYLKI-----TNFICNLILLFIHKILHQR 217
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 596 PKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
P YR I+G+ G+ LK +EKVT T I DN+
Sbjct: 706 PISFYRKIIGRCGENLKTIEKVTRTAIVFKRSFDNN 741
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 569 QQASKQISIP-KEHYRWILGKQGQKLKELEKVTATKINVP 685
Q ++ + +P EH I+G+QG K+K L T T I P
Sbjct: 45 QNVTESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTP 84
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 569 QQASKQISIP-KEHYRWILGKQGQKLKELEKVTATKINVP 685
Q ++ + +P EH I+G+QG K+K L T T I P
Sbjct: 45 QNVTESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTP 84
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 569 QQASKQISIP-KEHYRWILGKQGQKLKELEKVTATKINVP 685
Q ++ + +P EH I+G+QG K+K L T T I P
Sbjct: 76 QNVTESVEVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTP 115
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 566 QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV-PGISDNS 703
+ QA ++ +P+ I+GK G+ +K L T TKI P + NS
Sbjct: 190 EAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNS 236
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 566 QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV-PGISDNS 703
+ QA ++ +P+ I+GK G+ +K L T TKI P + NS
Sbjct: 237 EAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNS 283
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
A ++ +P+ I+GKQG +K L T TKI D S
Sbjct: 186 ARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPS 228
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
A ++ +P+ I+GKQG +K L T TKI D S
Sbjct: 249 ARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPS 291
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 575 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 703
A ++ +P+ I+GKQG +K L T TKI D S
Sbjct: 227 ARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPS 269
>AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical
protein Y48C3A.14 protein.
Length = 855
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 496 TAIFAGRYFDVRSCILSYG--MASS*GFSLTKSISIVKF 386
T F G+Y D+ S ++SYG + GF +T+ IV+F
Sbjct: 198 TKFFQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQF 236
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 578 SKQISIPKEHYRWILGKQGQKLKELEKVTATKI 676
S Q+ +P+ I+G QG +K++ T TKI
Sbjct: 332 SLQVKVPRSTVGAIMGLQGSNIKKISNETETKI 364
>Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 173 VIPVHPDVPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRN-IQQATNKLRVGSSL 349
++ HP + N V +EN+++ D+ PAL +V R +Q NK + ++L
Sbjct: 12 IVDGHPRFKCPLSTCNAVVHENDINAVLDEKEPALERYMSIVHRRYLQYKQNKHSIMAAL 71
>AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 173 VIPVHPDVPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRN-IQQATNKLRVGSSL 349
++ HP + N V +EN+++ D+ PAL +V R +Q NK + ++L
Sbjct: 12 IVDGHPRFKCPLSTCNAVVHENDINAVLDEKEPALERYMSIVHRRYLQYKQNKHSIMAAL 71
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 578 SKQISIPKEHYRWILGKQGQKLKELEKVTATKI 676
S Q+ +P+ I+G QG+ +K+L T TKI
Sbjct: 247 SLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKI 279
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 12/92 (13%)
Frame = +2
Query: 443 ITKDTGAHIEISTSKDGSLTFLITGKQSAVLEARRQILTHFQQQA------------SKQ 586
I +++GA I IS ITG + +A + F++ + +
Sbjct: 97 IREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKFEEDMLLLPNSVPKPPITMR 156
Query: 587 ISIPKEHYRWILGKQGQKLKELEKVTATKINV 682
+ +P ++GK G K+K++ + T I V
Sbjct: 157 VIVPATQCGSLIGKGGSKIKDIREATGASIQV 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,372,655
Number of Sequences: 27780
Number of extensions: 368974
Number of successful extensions: 1080
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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