Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_O14
         (371 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA...    44   0.001
UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA...    38   0.077
UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C oxidoreductase-s...    34   0.72 
UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p...    34   0.95 
UniRef50_A4SVF5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  

>UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG14482-PA
           - Tribolium castaneum
          Length = 63

 Score = 43.6 bits (98), Expect = 0.001
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 40  VGNQHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 183
           +G +H+EI                    Y TDWK+ +  +PYYNGKFK
Sbjct: 14  IGKKHIEIASQWIGSAVAFGATAGVGITYATDWKLILQYMPYYNGKFK 61


>UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14482-PA - Apis mellifera
          Length = 51

 Score = 37.5 bits (83), Expect = 0.077
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 34  VRVGNQHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 183
           +++G +H EI                    + TDWKV    IP+Y  KFK
Sbjct: 1   MKIGKRHFEIATKWIPSLMVYTGAAGLAMVFVTDWKVIAGYIPFYGNKFK 50


>UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative; n=1;
           Aedes aegypti|Rep: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 54

 Score = 34.3 bits (75), Expect = 0.72
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 124 YFTDWKVFVANIPYYNGKF 180
           Y TDW+V V  IP+Y GKF
Sbjct: 33  YLTDWRVIVTYIPFYGGKF 51


>UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p -
           Drosophila melanogaster (Fruit fly)
          Length = 57

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +1

Query: 43  GNQHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 183
           G +H EI                    Y+TDWK+ +  +P Y  KF+
Sbjct: 8   GKKHAEIASSFIRSGAGFGGAAGLAVLYYTDWKLVLQYVPIYGSKFE 54


>UniRef50_A4SVF5 Cluster: Putative uncharacterized protein; n=1;
           Polynucleobacter sp. QLW-P1DMWA-1|Rep: Putative
           uncharacterized protein - Polynucleobacter sp.
           QLW-P1DMWA-1
          Length = 303

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 35  FVWAINIWKSPPHSCLQPEG 94
           F+W+  +W+S    CLQP+G
Sbjct: 181 FIWSAKVWESLDRECLQPKG 200


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,125,782
Number of Sequences: 1657284
Number of extensions: 4303774
Number of successful extensions: 8738
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8735
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)