Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_O13
         (362 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   0.96 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   2.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   3.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   9.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   9.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   9.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.0  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 0.96
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 22  WFEAQLVXCGFSXVFYPR 75
           WF ++   CG   V YPR
Sbjct: 142 WFTSRTSACGLFSVCYPR 159


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 279 ITKL*HHGILQPSHQHHQ 226
           I  L H+G +Q    HHQ
Sbjct: 226 IDNLFHNGFMQEQSTHHQ 243


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 240 HQHHQTKNLHSSPLSAVFIFCMQL 169
           HQ H  +N+    LSA+   C  L
Sbjct: 314 HQQHHQQNMSHEELSAMVNRCHPL 337


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 246 PSHQHHQTKNLHSSPLSA 193
           PSH +    N +SSP+S+
Sbjct: 124 PSHPYTVISNGYSSPMSS 141


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +1

Query: 172 LHAKNEDC**WRRMQVFCLMMLMTGLEDTVMLQFC 276
           LH  N     WR +  + ++  ++ +   +++QFC
Sbjct: 154 LHCNNTT---WRCLYRWIVLYTLSKMSQVMLIQFC 185


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -1

Query: 215 CILLHYQQSSFFACSYPVTTISRIF 141
           CI   Y     F C++ + T+  +F
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLF 281


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 292 YSLFYYKTVASRYPPAQ 242
           + LFYY +  + Y P Q
Sbjct: 103 FDLFYYPSRQTLYTPVQ 119


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -3

Query: 264 HHGILQPSHQHH 229
           HH  +   HQHH
Sbjct: 118 HHEEVADGHQHH 129


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -3

Query: 264 HHGILQPSHQHH 229
           HH  +   HQHH
Sbjct: 118 HHEEVADGHQHH 129


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -3

Query: 264 HHGILQPSHQHH 229
           HH  +   HQHH
Sbjct: 118 HHEEVADGHQHH 129


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 294 HIHCFITKL*HHGILQPSHQHHQ 226
           HIH     + HH     S +HHQ
Sbjct: 329 HIHAQHHVVNHHVAANGSLKHHQ 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,056
Number of Sequences: 336
Number of extensions: 1078
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)