Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O09
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13939-1|CAA32122.1| 328|Homo sapiens laminin B2 protein. 31 4.2
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 4.2
M27654-1|AAA59489.1| 217|Homo sapiens laminin B2 protein. 31 4.2
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 31 4.2
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 4.2
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 4.2
BC130619-1|AAI30620.1| 1100|Homo sapiens CNTN5 protein protein. 30 7.4
BC039255-1|AAH39255.1| 617|Homo sapiens CNTN5 protein protein. 30 7.4
AB013803-1|BAA36580.2| 1026|Homo sapiens hNB-2s protein. 30 7.4
AB013802-1|BAA36579.2| 1100|Homo sapiens hNB-2 protein. 30 7.4
CR536513-1|CAG38751.1| 545|Homo sapiens TRIP10 protein. 29 9.8
BT020171-1|AAV43773.1| 545|Homo sapiens thyroid hormone recepto... 29 9.8
BT020167-1|AAV38969.1| 545|Homo sapiens thyroid hormone recepto... 29 9.8
BT006698-1|AAP35344.1| 545|Homo sapiens thyroid hormone recepto... 29 9.8
BC013002-1|AAH13002.1| 545|Homo sapiens thyroid hormone recepto... 29 9.8
AY081141-1|AAL89588.1| 456|Homo sapiens truncated Cdc42 interac... 29 9.8
AJ000414-1|CAA04062.1| 545|Homo sapiens Cdc42-interacting prote... 29 9.8
AF380114-1|AAK77492.1| 593|Homo sapiens FELIC protein. 29 9.8
>X13939-1|CAA32122.1| 328|Homo sapiens laminin B2 protein.
Length = 328
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +1
Query: 205 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 384
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 240 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 299
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +1
Query: 205 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 384
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>M27654-1|AAA59489.1| 217|Homo sapiens laminin B2 protein.
Length = 217
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +1
Query: 205 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 384
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 129 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 188
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +1
Query: 205 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 384
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +1
Query: 205 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 384
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 30.7 bits (66), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = +1
Query: 205 IDVYGKPSEKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHE 384
++ G+ L +L + + +D + + +++D+EN+A A ++DY+ D E
Sbjct: 1521 LEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIE 1580
>BC130619-1|AAI30620.1| 1100|Homo sapiens CNTN5 protein protein.
Length = 1100
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 LKRTQSVCRIXQLKLIKSSLYLCSSANTRGFRDXLRAXIIAAHPXRTRLREDGEMD-GSP 182
L+++Q+V I ++L + +Y C + N+RG + +P D ++D GSP
Sbjct: 347 LRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSP 406
>BC039255-1|AAH39255.1| 617|Homo sapiens CNTN5 protein protein.
Length = 617
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 LKRTQSVCRIXQLKLIKSSLYLCSSANTRGFRDXLRAXIIAAHPXRTRLREDGEMD-GSP 182
L+++Q+V I ++L + +Y C + N+RG + +P D ++D GSP
Sbjct: 53 LRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSP 112
>AB013803-1|BAA36580.2| 1026|Homo sapiens hNB-2s protein.
Length = 1026
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 LKRTQSVCRIXQLKLIKSSLYLCSSANTRGFRDXLRAXIIAAHPXRTRLREDGEMD-GSP 182
L+++Q+V I ++L + +Y C + N+RG + +P D ++D GSP
Sbjct: 273 LRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSP 332
>AB013802-1|BAA36579.2| 1100|Homo sapiens hNB-2 protein.
Length = 1100
Score = 29.9 bits (64), Expect = 7.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 6 LKRTQSVCRIXQLKLIKSSLYLCSSANTRGFRDXLRAXIIAAHPXRTRLREDGEMD-GSP 182
L+++Q+V I ++L + +Y C + N+RG + +P D ++D GSP
Sbjct: 347 LRKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSP 406
>CR536513-1|CAG38751.1| 545|Homo sapiens TRIP10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>BT020171-1|AAV43773.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>BT020167-1|AAV38969.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>BT006698-1|AAP35344.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>BC013002-1|AAH13002.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>AY081141-1|AAL89588.1| 456|Homo sapiens truncated Cdc42
interaction protein 4 protein.
Length = 456
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>AJ000414-1|CAA04062.1| 545|Homo sapiens Cdc42-interacting protein
4 protein.
Length = 545
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
>AF380114-1|AAK77492.1| 593|Homo sapiens FELIC protein.
Length = 593
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 142 GPVSERMEKWTEAQRKGQKIDIDVYGKPSEKQLREL-EHVRSLSKELQDNLHELETAVRI 318
GP R ++W ++ + D P E+Q + L + + S+ELQ + + E ++
Sbjct: 312 GPGRSRTKRWPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQREALKKM 371
Query: 319 ADV 327
DV
Sbjct: 372 KDV 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,671,808
Number of Sequences: 237096
Number of extensions: 1305890
Number of successful extensions: 3845
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3845
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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