Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_O07
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005342-1|AAH05342.1|  282|Homo sapiens nucleosomal binding pro...    43   9e-04
AL391294-1|CAI39708.1|  282|Homo sapiens nucleosomal binding pro...    43   9e-04
AF250330-1|AAK14063.1|  282|Homo sapiens nucleosomal binding pro...    43   9e-04
AF250329-1|AAK14062.1|  282|Homo sapiens nucleosomal binding pro...    43   9e-04
AL391294-3|CAI39710.1|  201|Homo sapiens nucleosomal binding pro...    37   0.058
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.            31   3.8  
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r...    31   3.8  
AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of r...    31   3.8  
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep...    31   3.8  

>BC005342-1|AAH05342.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +2

Query: 173 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 298
           +GKE G DE  E+   E GD +E+ D  E GD  E K+  VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229


>AL391294-1|CAI39708.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +2

Query: 173 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 298
           +GKE G DE  E+   E GD +E+ D  E GD  E K+  VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229


>AF250330-1|AAK14063.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +2

Query: 173 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 298
           +GKE G DE  E+   E GD +E+ D  E GD  E K+  VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229


>AF250329-1|AAK14062.1|  282|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 282

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = +2

Query: 173 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 298
           +GKE G DE  E+   E GD +E+ D  E GD  E K+  VK
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229


>AL391294-3|CAI39710.1|  201|Homo sapiens nucleosomal binding
           protein 1 protein.
          Length = 201

 Score = 37.1 bits (82), Expect = 0.058
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 173 NGKENGTDEAPEDSPAENGDAEESNDASENGD 268
           +GKE G DE  E+   E GD +E+ D  E GD
Sbjct: 168 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGD 199


>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
          Length = 2461

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 179 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 313
           K   T+EA E+ PA+  DAE +   +E     EKKE G  R + A
Sbjct: 845 KSECTEEA-EEGPAKGKDAEAAEATAERALKAEKKEGGSGRATTA 888


>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
           retinoic acid and thyroid hormone receptor extended
           isofo protein.
          Length = 2507

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 179 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 313
           K   T+EA E+ PA+  DAE +   +E     EKKE G  R + A
Sbjct: 845 KSECTEEA-EEGPAKGKDAEAAEATAERALKAEKKEGGSGRATTA 888


>AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of
           retinoic acid and thyroid hormone receptor alpha
           protein.
          Length = 2517

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 179 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 313
           K   T+EA E+ PA+  DAE +   +E     EKKE G  R + A
Sbjct: 863 KSECTEEA-EEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTA 906


>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
            co-repressor 2 variant protein.
          Length = 1469

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 179  KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 313
            K   T+EA E+ PA+  DAE +   +E     EKKE G  R + A
Sbjct: 881  KSECTEEA-EEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTA 924


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,729,518
Number of Sequences: 237096
Number of extensions: 1251952
Number of successful extensions: 3657
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3645
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)