Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_O06
(818 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 115 2e-27
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 115 2e-27
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 115 2e-27
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 115 2e-27
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 46 1e-06
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 3.7
AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14 prot... 24 6.5
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 6.5
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 115 bits (276), Expect = 2e-27
Identities = 52/133 (39%), Positives = 80/133 (60%)
Frame = +2
Query: 419 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 598
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 599 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 778
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 779 LNRLIGQIVSSIT 817
LN L+ +S +T
Sbjct: 121 LNHLVSLTMSGVT 133
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 115 bits (276), Expect = 2e-27
Identities = 52/133 (39%), Positives = 80/133 (60%)
Frame = +2
Query: 419 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 598
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 599 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 778
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 779 LNRLIGQIVSSIT 817
LN L+ +S +T
Sbjct: 121 LNHLVSLTMSGVT 133
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 115 bits (276), Expect = 2e-27
Identities = 52/133 (39%), Positives = 80/133 (60%)
Frame = +2
Query: 419 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 598
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 599 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 778
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 779 LNRLIGQIVSSIT 817
LN L+ +S +T
Sbjct: 121 LNHLVSLTMSGVT 133
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 115 bits (276), Expect = 2e-27
Identities = 52/133 (39%), Positives = 80/133 (60%)
Frame = +2
Query: 419 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 598
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 599 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN 778
+++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 779 LNRLIGQIVSSIT 817
LN L+ +S +T
Sbjct: 121 LNHLVSLTMSGVT 133
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 46.4 bits (105), Expect = 1e-06
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 101 MRACISVHVGQAGVQLGNACW 163
MR CISVHVGQAGVQ+GN CW
Sbjct: 1 MRECISVHVGQAGVQIGNPCW 21
Score = 40.7 bits (91), Expect = 5e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +3
Query: 156 PAGXFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 335
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 336 XXAHTDSC 359
A T SC
Sbjct: 79 APARTASC 86
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 130 PSRXPAR*CLLGALLPGARHPA*WPDAHRQDHR 228
P+ PA+ L+ +LP + PA P R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139
>AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14
protein.
Length = 92
Score = 23.8 bits (49), Expect = 6.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 22 PLHRSRCTPPASHF 63
P+HR +C P HF
Sbjct: 55 PVHREQCQPARGHF 68
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 207 CPQTRPSGVETILSTLSSARPELAS 281
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,198
Number of Sequences: 2352
Number of extensions: 18728
Number of successful extensions: 49
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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