Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_O02
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z81489-7|CAB04009.1|  225|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U21320-3|AAA62532.1|  436|Caenorhabditis elegans Hypothetical pr...    29   5.0  
L23649-1|AAA27912.1|  568|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z92827-7|CAB07324.1|  368|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical
           protein C27H5.3 protein.
          Length = 448

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 191 PEGAGGY*TRGLPVNPWQPEDQPVRDPRRPGAF*SHQQSAEPDRP 325
           PEG   Y          QP  QP +DP    A+  H Q+ +P  P
Sbjct: 14  PEGQQAYWAYYQQQQQQQPGGQPDQDPYAAAAYGGHDQAQQPQNP 58


>AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical
           protein T22B11.2 protein.
          Length = 368

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
 Frame = +1

Query: 520 VYHFHLIQQLTISTSRRYYKNH------KFIKIILPKHLVDSGY*KNPTSTHYLHSIIYS 681
           +YH   +  +T +  RR    H      +F+    P H V  G    P S + L      
Sbjct: 107 IYHKTRVPAITETWLRRCDAGHLFTNSDRFLNASTPYHTVFDGL---PESYYKLFWKTRL 163

Query: 682 ILLHVYKYVNK--NWKYENKFDTF 747
            LL++YKYV+K  +W ++   DT+
Sbjct: 164 ALLYIYKYVSKDFDWYFKGDDDTY 187


>Z81489-7|CAB04009.1|  225|Caenorhabditis elegans Hypothetical
           protein C55A1.9 protein.
          Length = 225

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 40  DTTNNAVLRVLASWSWWRSPLPPHSARV 123
           DT ++ V R+L    W R  LPP + RV
Sbjct: 169 DTADDVVYRILTGGGWGRDELPPPAPRV 196


>U21320-3|AAA62532.1|  436|Caenorhabditis elegans Hypothetical
           protein K04G7.4a protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 604 LPKHLVDSGY*KNPTST-HYLHSIIYSILL--HVYKYVNKNWKYENKFDTFCNEHH 762
           +PKH V   Y  NP  T H+LH +   +L   + Y Y+ KN  ++   + +   HH
Sbjct: 341 IPKHEVGELY-TNPRDTGHFLHVMRKEVLKSPYGYGYIAKNGDHQAGLNAWHTGHH 395


>L23649-1|AAA27912.1|  568|Caenorhabditis elegans Hypothetical
           protein C02C2.4 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = -1

Query: 433 SKIFSSIKFLSRVSCH-HNSLLKTCFFLY*LAQFLPTWSIWLCRLLMTSEGTWS--PRIS 263
           SKI +S  FL ++ CH   +L  T F +Y     LP++   +  L + + GT++  P I 
Sbjct: 318 SKILTSPAFLGQLQCHFFVNLFMTLFQIY-----LPSYFKEVLHLGVIANGTFTAIPNIF 372

Query: 262 YRL--ILWLPGIDW*AASSIPSCTFWITASLGIS 167
             +  ++W  GID    + I S T  +  S G++
Sbjct: 373 NMIFKVVWGIGIDKLKENKILSNTKAVKVSHGVA 406


>Z92827-7|CAB07324.1|  368|Caenorhabditis elegans Hypothetical
           protein C29F7.4 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +1

Query: 673 IYSILLH---VYKYVNKNWKYENKFDTFCNEH 759
           +Y+ +LH    Y+Y N+NWK   +      EH
Sbjct: 91  VYAFILHHWRYYRYANENWKNSVRHQLSSKEH 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,917,801
Number of Sequences: 27780
Number of extensions: 346855
Number of successful extensions: 1090
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)