Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_O01
         (474 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5PMQ7 Cluster: Novel protein; n=2; Danio rerio|Rep: No...    34   1.8  
UniRef50_Q7RSA6 Cluster: Putative uncharacterized protein PY0045...    32   5.6  
UniRef50_Q05FS7 Cluster: Putative uncharacterized protein; n=1; ...    32   7.4  
UniRef50_Q54IE8 Cluster: Putative uncharacterized protein irlE; ...    32   7.4  

>UniRef50_A5PMQ7 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 161

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 108 LKINKLHHNISFIHSCLQLFDSVYKSLRIFTTKRKKKMKHDVYKSLCLTL 257
           LK+N L H+    ++C  + +S YKS+ +   +++KK  H       LTL
Sbjct: 83  LKLNNLQHSDKGSYTCYIINESKYKSVNLIVEEKQKKTSHGTKPRPDLTL 132


>UniRef50_Q7RSA6 Cluster: Putative uncharacterized protein PY00456;
            n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00456 - Plasmodium yoelii yoelii
          Length = 2050

 Score = 32.3 bits (70), Expect = 5.6
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +3

Query: 156  LQLFDSVYKSL-RIFTTKRKKKMKHDVYKSLCLTLCNSCLRMSKIYL*MIRPFYILLITC 332
            L   + V KSL  +   K KK MK + + +LC  +CN C   SKI    I    +LL   
Sbjct: 908  LYFIEKVLKSLLNVQPVKMKKFMKSNFFSNLCTCICNICYN-SKIKK-KIFGLLLLLKAI 965

Query: 333  LFLHFIKIKW 362
              LH   IK+
Sbjct: 966  RILHPYWIKY 975


>UniRef50_Q05FS7 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 104

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 237 KSLCLTLCNSCLRMSKIYL*MIRPFYILLITCLFLHFIKIKWYF 368
           K L +   N  L++ KI L     F++    C FL+ IKIK++F
Sbjct: 6   KKLLIKKKNFILKVRKICLFCYNYFFLKCKNCFFLNLIKIKYFF 49


>UniRef50_Q54IE8 Cluster: Putative uncharacterized protein irlE; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein irlE - Dictyostelium discoideum
            AX4
          Length = 1350

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = +3

Query: 69   NLQNE*QKLVARFLKINKLHHNISFIHSCLQLFDSVYKSLR 191
            +L N+ +K VA + K ++LH  I FI + LQ ++ +Y+ L+
Sbjct: 1254 SLSNQIEKKVASY-KFDQLHDLIRFIRNTLQHYNQIYRDLK 1293


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,582,814
Number of Sequences: 1657284
Number of extensions: 5299284
Number of successful extensions: 12519
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12517
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)