Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N22
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical pr...    30   0.69 
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    28   3.7  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    28   3.7  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    28   3.7  
AF025452-8|AAB70940.1|  324|Caenorhabditis elegans Serpentine re...    27   4.9  

>Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.1 protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 89  YIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLNKLLLRYNLRSFL 232
           Y    P NLKL++    +L  IL   + N+ IY ++K+ L +    FL
Sbjct: 17  YFYNEPLNLKLVISIFELLSYILCGYILNLSIYVMSKIQLFHKNLMFL 64


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 83   YPYIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLN 196
            +P  +Y  F     ++   ++  ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 83   YPYIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLN 196
            +P  +Y  F     ++   ++  ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 83   YPYIIYLPFNLKLMVIYVSILGSILGFMVRNMGIYSLN 196
            +P  +Y  F     ++   ++  ILGF V +MG ++ N
Sbjct: 940  WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977


>AF025452-8|AAB70940.1|  324|Caenorhabditis elegans Serpentine
           receptor, class i protein31 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 362 NILKNYSVFYNIYQINNFKIYLFRFILW 445
           N+L  Y + ++  +++NF+ YL  F +W
Sbjct: 28  NLLVIYLILFHSGKLDNFRFYLLAFQIW 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,203,053
Number of Sequences: 27780
Number of extensions: 56252
Number of successful extensions: 172
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)