Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N18
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0575 - 18654887-18655047,18656182-18656242,18656777-18657250     36   0.042
02_05_0531 + 29811356-29811856                                         35   0.073
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212...    31   1.2  
08_02_1195 - 25149891-25151402,25152194-25152493                       31   1.2  
02_01_0252 - 1657268-1657692,1657727-1658445,1658761-1659089,165...    29   3.6  
01_06_0338 + 28538951-28538966,28539073-28539183,28539311-285394...    29   3.6  
08_02_0940 - 22822391-22822781,22822875-22823053,22823079-228234...    28   6.4  
05_03_0664 - 16762121-16762637,16762704-16763331,16763418-16763637     28   6.4  

>09_04_0575 - 18654887-18655047,18656182-18656242,18656777-18657250
          Length = 231

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 288 VETVVISRAMRGKKLGTYLMRRVEEYCKSVLNLKMIYLSTKGQENFYVKLGY 443
           VE VV+  A RG+ LG  ++RR+ E+ +     K+I   T     FY K G+
Sbjct: 103 VEDVVVDAAARGRGLGERVVRRLVEHARGRGCYKVIINCTPELTGFYAKCGF 154


>02_05_0531 + 29811356-29811856
          Length = 166

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +3

Query: 288 VETVVISRAMRGKKLGTYLMRRVEEYCKSVLNLKMIYLSTKGQENFYVKLGY 443
           VE VV+  A RG+ LG  ++RR+ E  K     K+I   T     +Y K G+
Sbjct: 104 VEDVVVDAAARGRGLGLRVVRRLVEIAKEAGCYKVILDCTPELRAYYAKCGF 155


>09_04_0318 -
           16620177-16620582,16620686-16620765,16620873-16621213,
           16621298-16621559
          Length = 362

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +3

Query: 102 EYLXACCEMINEEWPRSETARMMSLQASCNELPTSLILVANTKSLLGHCKLTAIPSIP 275
           EYL  CCE + EE  R +   +  L+A     P  + L A T S+   C+  A  S P
Sbjct: 239 EYLKRCCETLTEENRRLQ-KELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAP 295


>08_02_1195 - 25149891-25151402,25152194-25152493
          Length = 603

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 156 TARMMSLQASCNELPTSLILVANTKSLLGHCKLTA 260
           T +++SL+  C+EL  +L    +TK+++ H K +A
Sbjct: 323 TTKLVSLEGYCSELKKALKQATSTKNMISHSKRSA 357


>02_01_0252 -
           1657268-1657692,1657727-1658445,1658761-1659089,
           1659223-1659375,1659430-1659561,1659748-1659852,
           1660020-1660193,1660283-1660352,1660458-1660639,
           1660738-1660847,1660948-1661052,1661153-1661231,
           1662128-1662168,1662283-1662358,1662455-1662589
          Length = 944

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = -1

Query: 226 VFATKIKLVGSSLQDACKDIILAVSLRGHSSFIISQHALKYSGCLCNGXTLRPS 65
           V + K      S++ AC+  ++  SL    +F+I+   +  +G +CN   L P+
Sbjct: 253 VLSRKTPRSDKSIRAACRYFLIECSLAFIVAFLINVSVVVVAGSICNANNLSPA 306


>01_06_0338 +
           28538951-28538966,28539073-28539183,28539311-28539479,
           28540841-28541063,28541148-28541204,28541718-28541861,
           28541939-28542019,28543026-28543113,28543579-28543943,
           28544011-28544086,28544174-28544367,28544846-28545009,
           28545080-28545152,28545237-28545350,28545839-28545919,
           28546043-28546102,28546180-28546289,28546325-28546501,
           28546599-28546683
          Length = 795

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 420 NFYVKLGYKVCAPISIYGVRLPSHSYSSAVSIKLDNPVAINPITQ 554
           +F + +   VC P S++   L  HS  +AVS+ L+    I+ +++
Sbjct: 88  DFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETSTIISVMSK 132


>08_02_0940 -
           22822391-22822781,22822875-22823053,22823079-22823428,
           22823522-22823765
          Length = 387

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 102 EYLXACCEMINEEWPRSETARMMSLQASCNELPTSLILVANTKSLLGHCKLTA 260
           EYL  CCE + EE  R     +  L+A     P  + L A T S+   C+  A
Sbjct: 269 EYLKRCCETLTEE-NRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVA 320


>05_03_0664 - 16762121-16762637,16762704-16763331,16763418-16763637
          Length = 454

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 120 CEMINEEWPRSETARMMSLQASCNELPTSLILVAN 224
           C++ +  W R E AR +  +A C  +P  L   A+
Sbjct: 101 CDVFSGRWVRDEAARPLYREADCPYIPAQLACEAH 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,670,503
Number of Sequences: 37544
Number of extensions: 315003
Number of successful extensions: 701
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)