Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N18
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...   138   1e-34
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B prot...    23   7.2  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score =  138 bits (335), Expect = 1e-34
 Identities = 62/144 (43%), Positives = 94/144 (65%), Gaps = 3/144 (2%)
 Frame = +3

Query: 78  VLPLHKHPEYLXACCEMINEEWPRSETARMMSLQASCNELPTSLIL---VANTKSLLGHC 248
           V+P+H+HPE    C  +IN EWPRS  AR  S + S + LP +L+L   +  T ++LGH 
Sbjct: 241 VVPIHRHPELKEQCVRLINTEWPRSRMARFWSFETSTDMLPITLVLTQLIDETVTVLGHA 300

Query: 249 KLTAIPSIPESCFVETVVISRAMRGKKLGTYLMRRVEEYCKSVLNLKMIYLSTKGQENFY 428
           K++ +P+   S +VE+VV+    RG+ +GT+LM  VE+YCK ++N+  +Y++T GQE FY
Sbjct: 301 KVSPVPADDTSAYVESVVVDYRYRGRGIGTHLMEEVEKYCKVMMNINHMYIATDGQEVFY 360

Query: 429 VKLGYKVCAPISIYGVRLPSHSYS 500
            KLGY  C  I+I+G R   ++ S
Sbjct: 361 AKLGYIFCKAINIFGTRSTRNTVS 384



 Score = 48.0 bits (109), Expect = 3e-07
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
 Frame = +3

Query: 78  VLPLHKHPEYLXACCEMINEEWPRSETARMMSLQASCNELPTSLILVANTK---SLLGHC 248
           VLP++   ++   C   IN++W R  T R+ +L+ S  E+P SLI+ +       ++  C
Sbjct: 44  VLPINNKDKWYRTCNRQINQQWKRIRTERLKTLEHS-PEMPPSLIIASGENDRVQVIALC 102

Query: 249 KLTAIPSIPESCFVETV 299
            ++ IPS    C +E +
Sbjct: 103 SISKIPSCARRCLLEVI 119


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 457 LFLYTVYDCRAIVTVLLSVLN*IIQ 531
           LF++T++   A VTVLLS  + I+Q
Sbjct: 466 LFVFTLFTIIATVTVLLSAPHIIVQ 490


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 457 LFLYTVYDCRAIVTVLLSVLN*IIQ 531
           LF++T++   A VTVLLS  + I+Q
Sbjct: 466 LFVFTLFTIIATVTVLLSAPHIIVQ 490


>AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B
           protein.
          Length = 107

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 191 IAGRL*GHHSCGFTTGPLFV 132
           +AG L  H   G T GP F+
Sbjct: 65  VAGALESHREAGATVGPTFL 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,746
Number of Sequences: 2352
Number of extensions: 14648
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)