Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N18
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   1.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   2.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.6  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +3

Query: 516 KLDNPVAINPITQTVPGAFXXXXXXXXKILKNTDNTIKSNKTYMF 650
           K +  +  N + + +P AF            N D++ K  K++MF
Sbjct: 84  KKNGKIRYNLLKKVIPEAFKEIGVEMIDSCSNVDSSDKCEKSFMF 128


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 145 GHSSFIISQHALKYSGCLCNGXTLRP-SGSIFKGQTKNCCRLE 20
           GH S  + QH    +   C+G T+R  +G   K     C  L+
Sbjct: 274 GHGSPPVKQHRSSSASTTCSGHTVRCFTGGPRKSHESQCPMLQ 316


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 14  VSFQSATILCLPFKNGT 64
           + F S TILC+PF   T
Sbjct: 140 IVFNSGTILCVPFTTYT 156


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 518 FNTDSRTVTMARQSYTVYRNRCTNFVSQLHVEVFL 414
           FN ++R+V    +        C N++S+L V++ L
Sbjct: 157 FNANARSVVEKMRKENGKEFDCHNYMSELTVDILL 191


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 327 KLGTYLMRRVEEYCKSVLNLKMIYLS 404
           K G Y   R +  C S+L +K+ Y+S
Sbjct: 165 KKGVYFAFRDQGACISILAIKVYYIS 190


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 495 YSSAVSIKLDNPVAINPITQTVPG 566
           Y+S+V+  L     +NP+   +PG
Sbjct: 531 YTSSVNSNLTVNQTVNPVAINIPG 554


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,124
Number of Sequences: 438
Number of extensions: 3500
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)