Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_N15
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 303 4e-81
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 295 9e-79
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 245 1e-63
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 238 9e-62
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 231 2e-59
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 220 2e-56
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 218 1e-55
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 213 3e-54
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 204 1e-51
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 201 2e-50
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 197 2e-49
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 192 6e-48
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 192 1e-47
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 190 4e-47
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 175 1e-42
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 171 1e-41
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 170 3e-41
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 169 5e-41
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 168 1e-40
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 166 4e-40
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 165 7e-40
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 164 2e-39
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 161 2e-38
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 157 3e-37
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 157 3e-37
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 155 8e-37
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 155 1e-36
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 155 1e-36
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 155 1e-36
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 155 1e-36
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 152 7e-36
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 150 3e-35
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 149 5e-35
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 149 7e-35
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 149 7e-35
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 149 9e-35
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 149 9e-35
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 149 9e-35
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 148 1e-34
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 146 4e-34
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 146 5e-34
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 146 6e-34
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 146 6e-34
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 146 6e-34
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 145 1e-33
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 144 1e-33
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 144 3e-33
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 144 3e-33
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 144 3e-33
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 143 3e-33
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 142 8e-33
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 142 8e-33
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 142 1e-32
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 142 1e-32
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 141 1e-32
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 141 1e-32
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 141 2e-32
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 140 2e-32
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 140 2e-32
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 140 2e-32
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 140 3e-32
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 139 6e-32
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 139 6e-32
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 139 7e-32
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 139 7e-32
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 139 7e-32
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 139 7e-32
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 138 1e-31
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 138 1e-31
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 138 1e-31
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 138 1e-31
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 138 1e-31
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 138 1e-31
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 138 2e-31
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 138 2e-31
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 138 2e-31
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 137 2e-31
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 137 3e-31
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 137 3e-31
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 137 3e-31
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 137 3e-31
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 137 3e-31
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 136 4e-31
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 136 4e-31
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 136 5e-31
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 136 5e-31
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 136 5e-31
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 136 7e-31
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 136 7e-31
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 135 1e-30
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 134 2e-30
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 134 2e-30
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 134 2e-30
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 134 2e-30
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n... 134 2e-30
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 134 2e-30
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 134 3e-30
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 134 3e-30
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 134 3e-30
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 133 4e-30
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 132 6e-30
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 132 6e-30
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 132 6e-30
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 132 6e-30
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 132 6e-30
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 132 6e-30
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 132 6e-30
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 132 6e-30
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 132 8e-30
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 132 8e-30
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 132 1e-29
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 132 1e-29
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 131 1e-29
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 131 1e-29
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 131 1e-29
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 131 1e-29
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 131 2e-29
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 131 2e-29
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 130 3e-29
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 130 3e-29
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 130 3e-29
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 130 3e-29
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 130 3e-29
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 130 3e-29
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 130 3e-29
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 130 3e-29
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 130 5e-29
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 129 6e-29
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 129 6e-29
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 129 6e-29
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 129 6e-29
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 129 6e-29
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 129 6e-29
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 129 6e-29
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 129 6e-29
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 129 6e-29
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 129 8e-29
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 129 8e-29
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 129 8e-29
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 129 8e-29
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 128 1e-28
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 128 1e-28
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 128 1e-28
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 128 1e-28
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 128 1e-28
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 128 1e-28
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 128 1e-28
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 128 1e-28
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 128 2e-28
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 128 2e-28
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 128 2e-28
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 128 2e-28
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 128 2e-28
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 128 2e-28
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 128 2e-28
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 128 2e-28
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 128 2e-28
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 128 2e-28
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 127 2e-28
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 127 2e-28
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 127 2e-28
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 127 3e-28
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 127 3e-28
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 127 3e-28
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 127 3e-28
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 126 4e-28
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 126 4e-28
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 126 4e-28
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 126 4e-28
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 126 4e-28
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 126 4e-28
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 126 4e-28
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 126 4e-28
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 126 4e-28
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 126 4e-28
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 126 6e-28
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 126 6e-28
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 126 6e-28
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 126 6e-28
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 126 6e-28
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 126 7e-28
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 126 7e-28
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 126 7e-28
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 126 7e-28
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 126 7e-28
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 126 7e-28
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 125 1e-27
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 125 1e-27
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 125 1e-27
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 125 1e-27
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 125 1e-27
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 125 1e-27
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 125 1e-27
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 125 1e-27
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 125 1e-27
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 125 1e-27
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 125 1e-27
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 125 1e-27
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 124 2e-27
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 124 2e-27
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 124 2e-27
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 124 2e-27
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 124 2e-27
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 124 2e-27
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 124 2e-27
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 124 2e-27
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 124 2e-27
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 124 2e-27
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 124 2e-27
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 124 2e-27
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 124 2e-27
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 124 2e-27
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 124 3e-27
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 124 3e-27
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 124 3e-27
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 124 3e-27
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 124 3e-27
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 123 4e-27
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 123 4e-27
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 123 4e-27
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 123 4e-27
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 123 4e-27
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 123 4e-27
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 123 4e-27
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 123 4e-27
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 123 5e-27
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 123 5e-27
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 123 5e-27
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 123 5e-27
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 123 5e-27
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 123 5e-27
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 123 5e-27
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 123 5e-27
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 123 5e-27
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 122 7e-27
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 122 7e-27
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 122 7e-27
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 122 9e-27
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 122 9e-27
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 122 9e-27
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 122 9e-27
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 122 9e-27
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 122 9e-27
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 122 9e-27
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 122 9e-27
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 122 1e-26
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 122 1e-26
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 122 1e-26
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 122 1e-26
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 122 1e-26
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 122 1e-26
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 122 1e-26
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 121 2e-26
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 121 2e-26
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 121 2e-26
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 121 2e-26
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 121 2e-26
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 121 2e-26
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 121 2e-26
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 121 2e-26
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 121 2e-26
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 121 2e-26
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 121 2e-26
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 121 2e-26
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 120 3e-26
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 120 3e-26
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 120 3e-26
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 120 4e-26
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 120 4e-26
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 120 4e-26
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 120 4e-26
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 120 4e-26
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 120 4e-26
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 120 4e-26
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 120 4e-26
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 120 4e-26
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 120 4e-26
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 120 4e-26
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 120 4e-26
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 120 4e-26
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 120 4e-26
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 120 5e-26
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 120 5e-26
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 120 5e-26
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 120 5e-26
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 119 6e-26
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 119 6e-26
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 119 6e-26
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 119 6e-26
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 119 6e-26
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 119 6e-26
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 119 6e-26
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 119 6e-26
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 119 8e-26
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 119 8e-26
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 119 8e-26
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 119 8e-26
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 119 8e-26
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 119 8e-26
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 119 8e-26
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 118 1e-25
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 118 1e-25
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 118 1e-25
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 118 1e-25
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 118 1e-25
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 118 1e-25
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 118 1e-25
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 118 1e-25
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 118 2e-25
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 118 2e-25
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 118 2e-25
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 118 2e-25
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 117 3e-25
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 117 3e-25
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 117 3e-25
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 117 3e-25
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 117 3e-25
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 117 3e-25
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 117 3e-25
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 117 3e-25
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 117 3e-25
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 117 3e-25
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 117 3e-25
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 117 3e-25
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 116 5e-25
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 116 5e-25
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 116 5e-25
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 116 5e-25
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 116 5e-25
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 116 6e-25
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 116 6e-25
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 116 6e-25
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 116 6e-25
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 116 6e-25
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 116 6e-25
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 116 6e-25
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 116 6e-25
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 116 8e-25
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 116 8e-25
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 116 8e-25
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 116 8e-25
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 116 8e-25
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 116 8e-25
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 116 8e-25
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 116 8e-25
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 116 8e-25
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 115 1e-24
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 115 1e-24
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 115 1e-24
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 115 1e-24
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 115 1e-24
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 115 1e-24
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 115 1e-24
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 115 1e-24
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 115 1e-24
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 115 1e-24
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 115 1e-24
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 115 1e-24
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 115 1e-24
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 115 1e-24
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 115 1e-24
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 114 2e-24
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 114 2e-24
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 114 2e-24
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 114 2e-24
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 114 2e-24
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 114 2e-24
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 114 2e-24
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 114 2e-24
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 114 2e-24
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 114 2e-24
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 114 2e-24
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 114 2e-24
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 114 2e-24
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 114 2e-24
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 114 2e-24
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 113 3e-24
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 113 3e-24
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 113 3e-24
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 113 3e-24
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 113 3e-24
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 113 3e-24
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 113 4e-24
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 113 4e-24
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 113 4e-24
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 113 4e-24
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 113 4e-24
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 113 4e-24
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 113 4e-24
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 113 4e-24
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 113 4e-24
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 113 4e-24
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 113 4e-24
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 113 6e-24
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 113 6e-24
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 113 6e-24
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 113 6e-24
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 113 6e-24
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 113 6e-24
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 113 6e-24
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 112 7e-24
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 112 7e-24
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 112 7e-24
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 112 7e-24
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 112 7e-24
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 112 7e-24
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 112 1e-23
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 112 1e-23
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 112 1e-23
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 112 1e-23
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 112 1e-23
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 112 1e-23
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 112 1e-23
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 112 1e-23
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 112 1e-23
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 112 1e-23
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 111 1e-23
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 111 1e-23
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 111 1e-23
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 111 1e-23
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 111 1e-23
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 111 1e-23
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 111 2e-23
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 111 2e-23
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 111 2e-23
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 111 2e-23
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 111 2e-23
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 111 2e-23
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 111 2e-23
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 111 2e-23
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 110 3e-23
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 110 3e-23
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 110 3e-23
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 110 3e-23
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 110 3e-23
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 75 3e-23
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 110 4e-23
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 110 4e-23
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 110 4e-23
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 110 4e-23
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 109 5e-23
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 109 5e-23
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 109 5e-23
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 109 7e-23
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 109 7e-23
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 109 7e-23
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 109 7e-23
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 109 7e-23
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 109 7e-23
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 109 7e-23
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 109 7e-23
UniRef50_A2QA23 Cluster: ATP-dependent RNA helicase dbp6; n=1; A... 109 7e-23
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 109 9e-23
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 109 9e-23
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 109 9e-23
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 109 9e-23
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 109 9e-23
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 109 9e-23
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 109 9e-23
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 108 1e-22
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 108 1e-22
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 108 1e-22
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 108 1e-22
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 108 1e-22
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 108 1e-22
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 108 1e-22
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 108 2e-22
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 108 2e-22
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 108 2e-22
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 108 2e-22
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 108 2e-22
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 108 2e-22
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 108 2e-22
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 108 2e-22
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 107 2e-22
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 107 2e-22
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 107 2e-22
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 107 2e-22
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 107 2e-22
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 107 2e-22
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 107 3e-22
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 107 3e-22
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 107 3e-22
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 107 3e-22
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 107 3e-22
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 107 3e-22
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 107 3e-22
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 107 3e-22
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 303 bits (743), Expect = 4e-81
Identities = 147/188 (78%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
Frame = +3
Query: 165 TPTENVNEXTEDDKI-TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLA 341
+PTE E+++ TFKDLGV DVLCEAC++L W KP+KIQ EAIP+AL G+DIIGLA
Sbjct: 9 SPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLA 68
Query: 342 ETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVG 521
ETGSGKTGAFALPIL ALLE PQR FAL+LTPTRELAFQISEQFEALG+SIGV+ AVIVG
Sbjct: 69 ETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 522 GMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
G+D ++Q+L L+KKPHIIIATPGRL+DHLENTKGFNLR LKYLVMDEADRILNMDFE EV
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 702 DXILRVIP 725
D IL+VIP
Sbjct: 189 DKILKVIP 196
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 295 bits (723), Expect = 9e-79
Identities = 141/174 (81%), Positives = 158/174 (90%)
Frame = +3
Query: 195 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 374
E++ TFKDLGV DVLCEAC++L W KP+KIQ EAIP+AL G+DIIGLAETGSGKTGAFA
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 375 LPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
LPIL ALLE PQR FAL+LTPTRELAFQISEQFEALG+SIGV+ AVIVGG+D ++Q+L L
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 128
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILR 716
+KKPHIIIATPGRL+DHLENTKGFNLR LKYLVMDEADRILNMDFE EVD IL+
Sbjct: 129 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 182
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 245 bits (599), Expect = 1e-63
Identities = 113/185 (61%), Positives = 146/185 (78%)
Frame = +3
Query: 171 TENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETG 350
T ++ +DD TF+DLGV LC AC+EL WK+P+KIQ EAIP+AL GKDIIGLAETG
Sbjct: 29 TVEEDDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 351 SGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
SGKT AF +PILQ LLE PQR F+LIL PTREL+ QI EQ +LG+ IG+ +I+GG+D
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 531 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
MV+QAL LSKKPHII+ +PGR+ DHL+NTKGF+L +KYLV+DEAD++L+ DF+ ++ I
Sbjct: 149 MVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKI 208
Query: 711 LRVIP 725
+ +P
Sbjct: 209 ITSLP 213
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 238 bits (583), Expect = 9e-62
Identities = 112/193 (58%), Positives = 149/193 (77%)
Frame = +3
Query: 147 ASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKD 326
A+ EQ + + K+ F DLGV+ + EAC + +K P+ IQ +AIP AL +D
Sbjct: 84 AADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARD 143
Query: 327 IIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKC 506
+IGLA+TGSGKT AF +PILQAL +NP+ +FA +L PTRELA+QIS+Q EALG++IGV+
Sbjct: 144 VIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRS 203
Query: 507 AVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 686
A IVGGMDM++Q++ LSK+PH+I+ATPGRL DHLENTKGF+LR L+YLVMDEADR+L+MD
Sbjct: 204 ATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMD 263
Query: 687 FEVEVDXILRVIP 725
F +D +L+ IP
Sbjct: 264 FGPIIDKLLQSIP 276
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 231 bits (564), Expect = 2e-59
Identities = 113/184 (61%), Positives = 143/184 (77%), Gaps = 12/184 (6%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF +LGV + L +ACE L WK PSKIQ EA+P AL GKD+IGLA+TGSGKTGAFA+PILQ
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 390 ALLE-----NPQR-------YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDM 533
ALLE P++ +FA +L+PTRELA QI+EQFEALGA I ++CAV+VGG+D
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 534 VAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+ Q + L K+PH+I+ATPGRL DH+ +TKGF+L+ LKYLV+DEADR+LN DFE ++ IL
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 714 RVIP 725
IP
Sbjct: 190 EEIP 193
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 220 bits (538), Expect = 2e-56
Identities = 107/185 (57%), Positives = 140/185 (75%)
Frame = +3
Query: 171 TENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETG 350
T+N N ++ +F +L +V L +AC+ L + KP+ IQ +AIP AL G DIIGLA+TG
Sbjct: 69 TQNENTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTG 128
Query: 351 SGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
SGKT AFA+PIL L + + Y+A IL PTRELA QI E F++LG+ +GV+ IVGGM+
Sbjct: 129 SGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMN 188
Query: 531 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
M+ QA L +KPHIIIATPGRL+DHLENTKGF+LR LK+LVMDEADR+L+M+F +D I
Sbjct: 189 MMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRI 248
Query: 711 LRVIP 725
L++IP
Sbjct: 249 LKIIP 253
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 218 bits (533), Expect = 1e-55
Identities = 96/181 (53%), Positives = 138/181 (76%)
Frame = +3
Query: 183 NEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKT 362
NE E +TF+DL + + + E+ +EL WKKP++IQ+E +P A L KDIIGL+ETGSGKT
Sbjct: 148 NEEREKQNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKT 207
Query: 363 GAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 542
F +PILQ L N Q ++AL+++PTREL QIS+ F+ALG ++ + I GG+D+V Q
Sbjct: 208 ACFIIPILQDLKVNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQ 267
Query: 543 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
+L L+KKP++I++TPGR++DHL NTKGFNL+ LKYLV DEAD++L+ DFE ++ +L ++
Sbjct: 268 SLNLAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLIL 327
Query: 723 P 725
P
Sbjct: 328 P 328
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 213 bits (521), Expect = 3e-54
Identities = 99/172 (57%), Positives = 133/172 (77%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F + +V L E+ + LK+ +P+ IQ AIP AL GKDI+G+AETGSGKT AFA+PILQ
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L Q Y+AL+L PTRELAFQI E F+ALG+S+G++ I+GGM M+ QA L +KPH
Sbjct: 159 TLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPH 218
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+IIATPGRL+DHLE+TKGF+L+ L+YLVMDE DR++++D+ +D IL+ IP
Sbjct: 219 VIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIP 270
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 204 bits (499), Expect = 1e-51
Identities = 92/168 (54%), Positives = 124/168 (73%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF LG+ LC + L WK P+ IQ E +P AL G+DII LAETGSGKT AF LPILQ
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
LL+ QR++ALIL PTREL QIS+Q A+G ++GV +VGG+D QA+ L+KKPH
Sbjct: 112 RLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPH 171
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+++ +PGR+VDHL+ TKGF+L+ +K LV+DEADR+L++DF+ + +L
Sbjct: 172 VVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLL 219
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 201 bits (490), Expect = 2e-50
Identities = 95/174 (54%), Positives = 127/174 (72%), Gaps = 3/174 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F +LG+ L E C +L K+P+ +Q IP L G+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L E+P F L+LTPTRELA+QI+EQF LG +G+K +IVGGMDMVAQAL LS+KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNM---DFEVEVDXILRVIP 725
+IATPGRL DHL ++ F+++ +++LVMDEADR+L DF V+++ IL +P
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVP 177
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 197 bits (481), Expect = 2e-49
Identities = 95/172 (55%), Positives = 123/172 (71%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF++LG+ L C++L +K PS IQ IP L G+DII A+TGSGKT +FA+PIL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L E+P FA+ILTPTRELA QI EQF A+GA + V C+V++GG+D V QAL+L K+PH
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
II+ATPGRL HL N L+ K+LV+DEADR+L DFE+E+ IL +P
Sbjct: 125 IIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLP 176
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 192 bits (469), Expect = 6e-48
Identities = 93/199 (46%), Positives = 134/199 (67%), Gaps = 2/199 (1%)
Frame = +3
Query: 135 ATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVAL 314
A + +S Q+ + + E TF+DLG+ LC AC + W+ P++IQ I V
Sbjct: 29 APSTSSVKHQSLGSELLDDEEFKAKTFQDLGLCQELCAACADAGWQHPTRIQASTITVFA 88
Query: 315 LGKDIIGLAETGSGKTGAFALPILQALLENPQRYF--ALILTPTRELAFQISEQFEALGA 488
G+D+IG+A+TGSGKTGA+ALP++ LL + + L++ PTRELA Q++ QF LG
Sbjct: 89 EGRDLIGVAQTGSGKTGAYALPLVNWLLAQRKTPYLSVLVMVPTRELAQQVTAQFVLLGR 148
Query: 489 SIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 668
S+G++ A +VGG DMV QA LSK+PH+++ TPGR+ DHL NTKGF L L LV+DEAD
Sbjct: 149 SVGLRVATLVGGADMVEQACELSKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEAD 208
Query: 669 RILNMDFEVEVDXILRVIP 725
++L+M++E E+D IL +P
Sbjct: 209 KMLDMNYEKEIDAILEQLP 227
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 192 bits (467), Expect = 1e-47
Identities = 89/174 (51%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ L E C++L ++P+ +Q+ +P L G+D +G A+TGSGKT AF LPILQ
Sbjct: 4 FGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPILQK 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L E+P F L+LTPTRELA+QI+EQF LG +G+K ++VGGMDMV QAL LS+KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALDLSRKPHV 123
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNM---DFEVEVDXILRVIP 725
+IATPGRL DHL ++ F+++ +++LVMDEADR+L +F ++ IL +P
Sbjct: 124 VIATPGRLADHLRSSSTFSIKKIRFLVMDEADRLLEQGCSEFTKDLKVILGAVP 177
>UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 454
Score = 190 bits (462), Expect = 4e-47
Identities = 87/152 (57%), Positives = 119/152 (78%)
Frame = +3
Query: 270 KKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTREL 449
+ P+ IQ AIP AL G+D+IGLA TGSGKTGAF +P+L LLE+ QR + ++L P+REL
Sbjct: 53 RHPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLEDVQRIYCVVLAPSREL 112
Query: 450 AFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFN 629
QI+EQF AL +SI ++ VI+GG+DMV QA L+K+PH+I+A+PGRL DH+ENTKGF+
Sbjct: 113 CEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVASPGRLADHVENTKGFS 172
Query: 630 LRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L +K LV+DEADR+L+ DF+ E+D I+ +P
Sbjct: 173 LSTVKKLVIDEADRLLSQDFDEELDKIIHAMP 204
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 175 bits (425), Expect = 1e-42
Identities = 83/186 (44%), Positives = 134/186 (72%), Gaps = 6/186 (3%)
Frame = +3
Query: 186 EXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 365
+ T + TFKDLG++ + + E L +KKP++IQ+ +IPVAL KDIIG+A+TGSGKT
Sbjct: 2 DNTTPKQKTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTA 61
Query: 366 AFALPILQALL---ENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDM 533
+F LP++Q LL E + ++ +I+ PTRELA Q+ E + +G ++ G+ ++VGGMD+
Sbjct: 62 SFLLPMVQHLLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDV 121
Query: 534 VAQALMLSKKPHIIIATPGRLVDHLENTKGF--NLRPLKYLVMDEADRILNMDFEVEVDX 707
+ Q++ L+K+P +I+ TPGR+V H++NTKG ++ +K+LV+DEAD++L MDF E+D
Sbjct: 122 MKQSVQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDY 181
Query: 708 ILRVIP 725
++ +P
Sbjct: 182 LIEKLP 187
>UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 488
Score = 171 bits (417), Expect = 1e-41
Identities = 88/195 (45%), Positives = 132/195 (67%), Gaps = 7/195 (3%)
Frame = +3
Query: 162 QTP--TENVNEXTEDDKI-TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDII 332
+TP T +++E + + TF+ LGV + + E C+ L+ KKP+KIQK +P A GK++I
Sbjct: 59 ETPNHTSDIHENNKKKNLETFESLGVPNWIIEICKSLQIKKPTKIQKLCLPSAFKGKNLI 118
Query: 333 GLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAV 512
G +ETG+GKT F PIL +L +NP ++L+LTPTRELAFQIS+QF G ++ +
Sbjct: 119 GCSETGTGKTICFCWPILTSLAKNPYGVYSLVLTPTRELAFQISDQFRIFGVNMNIVVLS 178
Query: 513 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPL----KYLVMDEADRILN 680
VGG+D+V+Q++ + K+PH+IIATPGRL + N + NL + KYLV DE+DR+L+
Sbjct: 179 CVGGVDIVSQSIEMEKRPHVIIATPGRLAYQVSNPER-NLSSIFANVKYLVFDESDRLLD 237
Query: 681 MDFEVEVDXILRVIP 725
+ F+ + IL+ IP
Sbjct: 238 ISFQEPLKEILKCIP 252
>UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase
Dbp45A; n=5; Endopterygota|Rep: Probable ATP-dependent
RNA helicase Dbp45A - Drosophila melanogaster (Fruit
fly)
Length = 521
Score = 170 bits (414), Expect = 3e-41
Identities = 85/171 (49%), Positives = 115/171 (67%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ LG+ L + +L K + IQ++ IP L G+D IG A+TGSGKT AFALPIL+
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L E P +FAL+LTPT ELA+QISEQF G ++GV+ V+ GG D + ++ L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++A PGRL DHL F+ LKYLV+DEADR+LN DF+ + I R +P
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLP 179
>UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP8 -
Ustilago maydis (Smut fungus)
Length = 602
Score = 169 bits (412), Expect = 5e-41
Identities = 93/224 (41%), Positives = 138/224 (61%), Gaps = 7/224 (3%)
Frame = +3
Query: 75 LPQNNAHFSXMPAAKXSXGAATNQASXVEQTPTENVNEXTEDDK--ITFKDLGVVDVLCE 248
L N+A S A S + A+ + + V + D +F +G+ +L
Sbjct: 63 LTANHARNSMPQVAASSSNVGPSSAAASSASHVQEVAKSASDPPKHTSFSSIGISPMLIR 122
Query: 249 ACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALI 428
+ L+ K P+ IQ IP L G+D++G A+TGSGKT FALPIL L+++ FA++
Sbjct: 123 SLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILNKLIKDMVGGFAVV 182
Query: 429 LTPTRELAFQISEQFEAL--GASIGVKCAVIVGGMDMVAQALMLSK-KPHIIIATPGRLV 599
LTPTREL Q+ EQF A+ GA +G++CA+++GGMDM+ QA L+ +PH+I+ATPGRLV
Sbjct: 183 LTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQASELANLRPHVIVATPGRLV 242
Query: 600 DHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
DHL + G + LR K+LV+DEADR+L F+ E++ + V+P
Sbjct: 243 DHLRSGGGEEWGLRRCKFLVLDEADRLLTDTFKPELEYLYSVLP 286
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 168 bits (408), Expect = 1e-40
Identities = 84/197 (42%), Positives = 124/197 (62%), Gaps = 8/197 (4%)
Frame = +3
Query: 159 EQTPTENVNEXTEDDKI------TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG 320
++ P V E DD TF +LG+ L + C+ L + P+ +Q+ IP AL G
Sbjct: 55 DEAPAAAVTEHAGDDAAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEG 114
Query: 321 KDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGV 500
+D++G+AETGSGKT AFALPIL L E+P AL L PTRELA Q++EQF ALGA +G+
Sbjct: 115 RDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGL 174
Query: 501 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRI 674
+C +GG D + QA L+++PH+++ATPGR+ + + K+LV+DEADR+
Sbjct: 175 RCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRV 234
Query: 675 LNMDFEVEVDXILRVIP 725
L+++FE ++ I +P
Sbjct: 235 LDINFEEDLRVIFGSLP 251
>UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase
superfamily II protein; n=2; Ostreococcus|Rep: Ddx49
Ddx49-related DEAD box helicase superfamily II protein -
Ostreococcus tauri
Length = 419
Score = 166 bits (404), Expect = 4e-40
Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 3/175 (1%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF +LG+ +V+ + + + ++ PS +Q IP L GKD+IG+A TGSGKT AFALPI+
Sbjct: 3 TFDELGLCNVVLKILKRVHFRSPSDVQSTCIPQILAGKDVIGIANTGSGKTAAFALPIVD 62
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L +P FAL L+PTRELA QI++QF GA G+ C VI GG D++ QA LS++P+
Sbjct: 63 MLSRDPYGIFALCLSPTRELANQIADQFTVFGAGTGLNCMVITGGEDLIQQATALSRRPN 122
Query: 570 IIIATPGRLVDHL---ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ATPGRL +H NT + LK L++DEADR+L+ F E+ ++ +P
Sbjct: 123 IVVATPGRLFEHFMHSSNTVQY-FSKLKCLILDEADRLLDSSFAAELKYLMSNLP 176
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 165 bits (402), Expect = 7e-40
Identities = 83/175 (47%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF +L + L ACE L +KKP+ IQ IP+AL G+D+ A TGSGKT AFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 390 ALLENPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
LL P+R FA LILTPTRELA QI + L +KC +IVGG+ + Q ++L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
P I++ATPGR++DHL N+ +L L L++DEADR+L F E+ ++R+ P
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCP 342
>UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_39979_41331 - Giardia lamblia
ATCC 50803
Length = 450
Score = 164 bits (399), Expect = 2e-39
Identities = 78/163 (47%), Positives = 114/163 (69%), Gaps = 5/163 (3%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK--DIIGLAETGSGKTGAFALPIL 386
F+DLGV L +A E + W +P+ IQKE + V K D++G+AETGSGKTGAFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLTVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 387 QALLE---NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
Q LLE N + ++L+PTRELA Q F LG G++ +++GG+D++ Q L+
Sbjct: 63 QDLLERGTNVKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRKTLA 122
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 686
++PH++I TPGRLVDHL T+GF+L+ L++L++DEAD++L D
Sbjct: 123 QQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKMLEQD 165
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 161 bits (390), Expect = 2e-38
Identities = 80/177 (45%), Positives = 116/177 (65%), Gaps = 3/177 (1%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
++TF LGV +L + + P+ IQ++++P + G+D G+A TGSGKT FALPI
Sbjct: 60 EVTFSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPI 119
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
LQ L ++P FAL+LTPTRELA QI +Q A G +G++ ++GG D V Q+ +L +
Sbjct: 120 LQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGGKDSVEQSAILDSR 179
Query: 564 PHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRIL--NMDFEVEVDXILRVIP 725
PHI+IATPGRL LE+ N R +KYLV+DEADR+L + +F ++ IL+ +P
Sbjct: 180 PHILIATPGRLAYMLESAAAQRNFRRMKYLVLDEADRLLCGDPEFNKQLTMILQALP 236
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 157 bits (381), Expect = 3e-37
Identities = 83/184 (45%), Positives = 119/184 (64%), Gaps = 5/184 (2%)
Frame = +3
Query: 186 EXTEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 359
+ +ED+ T F LGV + + + ++ K + +Q IP L G DI+G A TG+GK
Sbjct: 80 QISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Query: 360 TGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA 539
T AFA+PILQ L +P +ALILTPTRELAFQI+EQF ALG I +KC+VIVGG ++
Sbjct: 140 TLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIH 199
Query: 540 QALMLSKKPHIIIATPGRLVDHLE---NTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
QA LS++PH+++ATPGRL D +E +T + +++ V+DEADR+L + ++ I
Sbjct: 200 QARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPI 259
Query: 711 LRVI 722
I
Sbjct: 260 FESI 263
>UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14;
Ascomycota|Rep: ATP-dependent RNA helicase DBP8 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 431
Score = 157 bits (380), Expect = 3e-37
Identities = 86/175 (49%), Positives = 113/175 (64%), Gaps = 4/175 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
FK LG+ L E+ +K +P+ IQK IP L G+D IG A+TGSGKT AFA P+L
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
E+P F ++LTPTRELA QI+EQF ALG+S+ ++ +VIVGG +V QAL L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 573 IIATPGRLVDHL----ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
IIATPGRL H+ ++T G L KYLV+DEAD +L F + + +P
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG-GLMRAKYLVLDEADILLTSTFADHLATCISALP 177
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 155 bits (377), Expect = 8e-37
Identities = 82/208 (39%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Frame = +3
Query: 114 AKXSXGAATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQK 293
A S + ++ E+ + T D F +L + L ACE L +KKP+ IQ
Sbjct: 117 ATSSESDSESEDGFQERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQA 176
Query: 294 EAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA----LILTPTRELAFQI 461
IP+A+ G+D+ G A TGSGKT AF LP L+ +L R A L+L PTRELA Q+
Sbjct: 177 AVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQV 236
Query: 462 SEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPL 641
+ E+L ++ ++VGG+ QA L +P I++ATPGR++DH+ NT F L L
Sbjct: 237 HQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRNTHSFGLEDL 296
Query: 642 KYLVMDEADRILNMDFEVEVDXILRVIP 725
L++DEADR+L M F E+ I+R P
Sbjct: 297 ATLILDEADRLLEMGFLEEIKEIVRQCP 324
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 155 bits (376), Expect = 1e-36
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
Frame = +3
Query: 180 VNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 359
+ + E++ TF++L + L +A ++L + +P+ IQ +AIP+AL GKDI+ A TGSGK
Sbjct: 181 LKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGK 240
Query: 360 TGAFALPILQALLENPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
T AF LP+L+ LL Y A LIL PTRELA Q E L + +IVGG+
Sbjct: 241 TAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLS 300
Query: 531 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
AQ + L K P ++IATPGRL+DHL N G L L+ L++DEADR+L+M F+ E++ I
Sbjct: 301 NKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKI 360
Query: 711 LRVIP 725
+ P
Sbjct: 361 VESCP 365
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 155 bits (376), Expect = 1e-36
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
DD TF DLG+ + +AC+ L WK P IQ + IP A+ KDI G AETGSGKTGA+ L
Sbjct: 3 DDSYTFSDLGLCQPMVDACKSLGWKYPMPIQIKTIPPAIEKKDICGTAETGSGKTGAYML 62
Query: 378 PILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
PI + ENP +FAL+ PTRELA QI +G I V+ I+GG+D +Q L
Sbjct: 63 PIFHHMWENPHSFFALVFAPTRELATQIDHVTRDIGKDIKVRVCTIIGGVDEDSQVKALK 122
Query: 558 KKPHIIIATPGRLVDHLENT-KGFNLRPLKYLVMDEADRIL-NMDFEVEVDXIL 713
+PH+++ATPGRL + N K L ++ LV DEAD +L F+ ++ IL
Sbjct: 123 AQPHVVVATPGRLARLIRNNPKVIPLNKVECLVFDEADNMLREPSFQTDIQLIL 176
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 155 bits (376), Expect = 1e-36
Identities = 75/168 (44%), Positives = 112/168 (66%), Gaps = 2/168 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ LGV + A E + W KP+ IQ++ I A+ G+D+ G AETGSGKTGAF +P+L
Sbjct: 3 FQALGVHPDIIAAVESMGWSKPTPIQEKTIKQAIAGEDVSGAAETGSGKTGAFLIPLLHQ 62
Query: 393 LLEN--PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
LLE P++Y +IL PTREL QI+E + + A + + I GG+D V Q L+K+P
Sbjct: 63 LLEKDRPEKY-GIILAPTRELVIQIAEVAQLMSAKLNITIVPIYGGVDDVEQMAQLAKRP 121
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
HII+ATPGRL + + KGF+L+P++ +V+DEAD++ ++F ++ I
Sbjct: 122 HIIVATPGRLAQLIRDAKGFDLKPVRVIVIDEADKMAAVEFFDDISVI 169
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 155 bits (376), Expect = 1e-36
Identities = 82/175 (46%), Positives = 113/175 (64%), Gaps = 2/175 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF+ LG+ L A + KKP++IQ + L G+D IG A+TGSGKT AFALPI+
Sbjct: 152 VTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIV 211
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ + +P +A++LTPTRELA+Q+SEQF +G +G+ A IVGGMDM+ QA L +P
Sbjct: 212 ERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARP 271
Query: 567 HIIIATPGRLVDHLEN--TKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HII+ATPGRL D L + L ++ LV+DEADR+L F E+ + IP
Sbjct: 272 HIIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQIP 326
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 152 bits (369), Expect = 7e-36
Identities = 77/172 (44%), Positives = 112/172 (65%), Gaps = 2/172 (1%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K T++DLG++ L +A EE++++ P+ IQ AIP AL GKD++ + TGSGKT AF +PI
Sbjct: 189 KKTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPI 248
Query: 384 LQALLENPQRYF--ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
LQ +P + ALI+TPTRELAFQI E F L ++ +++G M Q L
Sbjct: 249 LQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELR 308
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
P +IIATPGRL+DHL+N++ +L L+ L+ DEAD++L++ FE I+
Sbjct: 309 GNPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNIV 360
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 150 bits (364), Expect = 3e-35
Identities = 82/176 (46%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF++LG+ + +A EL ++KPS IQ++AIP AL G+D++G A+TG+GKT AFA PIL
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 387 QAL---LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
Q L + + +LILTPTRELA QI E FEA G + ++ AVI GG+ Q L
Sbjct: 61 QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLK 120
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
K I++ATPGRL+D L+ +L L+ V+DEADR+L+M F +V +L+++P
Sbjct: 121 KGVDILVATPGRLLD-LQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLP 175
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 149 bits (362), Expect = 5e-35
Identities = 82/172 (47%), Positives = 110/172 (63%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F +L + A ++ P+ IQ +AIP AL GKD+IG A TG+GKT AF LP++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L P AL+L PTRELA QI E+ E G + V+ AVI+GG+ M QA L +K
Sbjct: 65 RLAGKPGTR-ALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+IATPGRLVDHLE L ++ LV+DEADR+L+M F+ ++D ILR +P
Sbjct: 124 IVIATPGRLVDHLEQGNA-RLDGIEALVLDEADRMLDMGFKPQLDRILRRLP 174
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 149 bits (361), Expect = 7e-35
Identities = 81/187 (43%), Positives = 120/187 (64%), Gaps = 6/187 (3%)
Frame = +3
Query: 183 NEXTED-DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 359
N+ T+ D + F+ L +++ + +A EE ++ P+ IQ EAIP+ L G D++G A+TG+GK
Sbjct: 73 NQTTDHTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGK 132
Query: 360 TGAFALPILQAL-----LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 524
T AFA+P+LQ L E ++ +LI+TPTRELA QI E F+A G G+ VI GG
Sbjct: 133 TAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGG 192
Query: 525 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 704
++ Q L K I+IATPGRL+D L N +LR +++ V+DEADR+L+M F ++
Sbjct: 193 VNQNPQTASLQKGIDILIATPGRLLD-LMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIR 251
Query: 705 XILRVIP 725
IL +P
Sbjct: 252 KILAELP 258
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 149 bits (361), Expect = 7e-35
Identities = 73/172 (42%), Positives = 111/172 (64%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF++LG+ D L ++ E + +++ + IQ E IP AL GKDIIG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ + + +++ PTRELA Q+ E+ +G V+ I GG D+ Q L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
II+ TPGR++DH+ N K L+ ++ +V+DEAD +LNM F +++ IL +P
Sbjct: 123 IIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVP 173
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 149 bits (360), Expect = 9e-35
Identities = 77/183 (42%), Positives = 115/183 (62%)
Frame = +3
Query: 132 AATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 311
++T +A+ ++ + E D TF LG+ L ++ KP+KIQ+ IP
Sbjct: 5 SSTTRATIKKKDEETKIKEVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPL 64
Query: 312 LLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGAS 491
L +++G AETGSGKT AFALPI+ L +P FAL+LTPTRELA QI++QF+A GA
Sbjct: 65 LSFHNVLGGAETGSGKTAAFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGAC 124
Query: 492 IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADR 671
I ++ +VGG+D++ LS PH+IIATPG+LV +++ F+ K+L++DEADR
Sbjct: 125 INIRVVQVVGGVDVIRILHHLSGSPHVIIATPGKLVSLIDHLP-FSFDSAKFLILDEADR 183
Query: 672 ILN 680
+ +
Sbjct: 184 LFD 186
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 149 bits (360), Expect = 9e-35
Identities = 78/176 (44%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF++L +++ + +A + + P+ IQ+++IP+ L GKD++G A+TG+GKT AF++PIL
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 387 QALLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
Q L + R AL+LTPTRELA QI E FEA G G+K AVI GG+ Q L
Sbjct: 61 QKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRS 120
Query: 561 KPHIIIATPGRLVDHLENTKGF-NLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ATPGRL+D + ++GF +L L + V+DEADR+L+M F ++ IL+++P
Sbjct: 121 GIQILVATPGRLLDLI--SQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLP 174
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 149 bits (360), Expect = 9e-35
Identities = 74/177 (41%), Positives = 111/177 (62%), Gaps = 3/177 (1%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
D+ ++F+D+ + L +A + +K+P+ IQK IPV LLGKDI A TG+GKT AFAL
Sbjct: 215 DENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFAL 274
Query: 378 PILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
P+L+ L+ P++ L+L PTREL Q+ L + + VGG+D+ +Q
Sbjct: 275 PVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEA 334
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRV 719
L P I+IATPGRL+DHL N F+L ++ L++DEADR+L+ FE ++ I+R+
Sbjct: 335 ALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 391
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 148 bits (359), Expect = 1e-34
Identities = 82/164 (50%), Positives = 104/164 (63%), Gaps = 4/164 (2%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
D TF L V L ++ + K+P+ IQK IP L G+D IG + TGSGKT AFA+
Sbjct: 192 DANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 251
Query: 378 PILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
PILQ NP F +ILTPTRELA QI EQ AL +K +I GG DM QA+ L+
Sbjct: 252 PILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLA 311
Query: 558 KKPHIIIATPGRLVDHLENTKG----FNLRPLKYLVMDEADRIL 677
K+PH++IATPGRL DH+ T G LR +K++V+DEADR+L
Sbjct: 312 KRPHLVIATPGRLADHI-RTSGEDTICGLRRVKFIVLDEADRLL 354
>UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia
theta|Rep: DEAD box protein - Guillardia theta
(Cryptomonas phi)
Length = 386
Score = 147 bits (355), Expect = 4e-34
Identities = 69/168 (41%), Positives = 107/168 (63%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F +G+ + CE + +KK +K+Q IP L+GKD++ ++TGSGKT A+ LP+L
Sbjct: 2 VKFDQIGICKQISRVCEAVGFKKATKVQVYTIPHFLIGKDLLVYSQTGSGKTLAYILPLL 61
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
Q LL Y +I+ P+REL FQIS FE + ++ A + GG+D Q +M+S P
Sbjct: 62 QKLLYKKNNYLPIIIVPSRELVFQISTTFETISCVFNIRIASLTGGIDPNVQLVMISSNP 121
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
III+TPGRLV+ L+ TK ++ LV+DEAD++++ DF+ E++ I
Sbjct: 122 DIIISTPGRLVEILKLTKNLEIKFCTDLVLDEADKLIHSDFKREINII 169
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 146 bits (354), Expect = 5e-34
Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F DLG+ D + +A ++ ++ PS IQ IP L G+D++G A+TG+GKT AFALP+L
Sbjct: 15 LLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLL 74
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 563
+ N + L+L PTRELA Q++E F+ ASI G + + GG Q L +
Sbjct: 75 TRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRG 134
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
H+I+ TPGR++DHLE +L LK LV+DEAD +L M F +V+ +LR +P
Sbjct: 135 VHVIVGTPGRVIDHLERGT-LDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLP 187
>UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 520
Score = 146 bits (353), Expect = 6e-34
Identities = 78/174 (44%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ LGV L + C + P+ IQK IP L GK ++G A TGSGKT AF LP+LQ
Sbjct: 4 FEALGVHQWLSKQCAYMALHHPTPIQKLCIPSILAGKCVVGGAATGSGKTAAFVLPLLQI 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L E+P FAL+LTP+RELA+QI +QF ALGA + ++ A+ +GG+ Q +L +PH+
Sbjct: 64 LAEDPYGVFALVLTPSRELAYQILDQFVALGAPLHIRAALAIGGVPHEQQVSVLHGRPHV 123
Query: 573 IIATPGRLVDHL----ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
++ATPGRL L E K F+ L++LV+DEADR+ D E +V ++ ++
Sbjct: 124 VVATPGRLKFLLGTFPEARKAFS--HLRFLVLDEADRLTTDDMEGDVSDVVELL 175
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 146 bits (353), Expect = 6e-34
Identities = 78/187 (41%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Frame = +3
Query: 174 ENVNEXTED-DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETG 350
E +N ++ + ITF++LGV D L + + + P+KIQ+ +P+ + GK++IG +ETG
Sbjct: 58 EQINSYSDQSNNITFEELGVEDWLIKISKSVHILYPTKIQQLCLPLIIQGKNVIGSSETG 117
Query: 351 SGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
SGKT + ILQ L +N F+LIL PTREL FQI EQF G+ IGV +GG
Sbjct: 118 SGKTICYCWSILQELNKNVYGIFSLILLPTRELVFQIIEQFHLYGSKIGVMILSCIGGFS 177
Query: 531 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRILNMDFEVEVD 704
++ Q + KPHII+ TPGR+ D LE++ + L++LV+DEAD +L FE ++
Sbjct: 178 LIEQRKSVMTKPHIIVGTPGRISDILESSIDIQNCFKRLRFLVLDEADLLLQKCFEDKLQ 237
Query: 705 XILRVIP 725
IL +P
Sbjct: 238 NILNNLP 244
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 146 bits (353), Expect = 6e-34
Identities = 66/167 (39%), Positives = 109/167 (65%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F DL + + L + C+E +P+++Q++ IP L G D+I +++TGSGKT AF LPI+
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
LL+ + ++ L++ PTREL+ QI+E F A+ G++ ++VGG + QA LSK+PH+
Sbjct: 63 LLQKNRSFYCLVVAPTRELSSQIAECFNMFQAT-GLRVCLLVGGANFNVQANQLSKRPHV 121
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
++ TPGR+ +H+ TK F ++ V+DEADR DF +++ I+
Sbjct: 122 VVGTPGRIAEHVLKTKSFRTERVRKFVLDEADRFFEQDFVEDLETII 168
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 145 bits (351), Expect = 1e-33
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 7/219 (3%)
Frame = +3
Query: 90 AHFSXMPAAKXSXGAATNQASXVEQTPTENVNEXTE----DDKITFKDLGVVDVLCEACE 257
AH S + A ++ PTE+ + DD+ F DLG+ + + A
Sbjct: 180 AHASVSNETQTDSSLVEEAAETIQPAPTEDTVQAVAPEEVDDRPLFADLGLSEPVQRAIT 239
Query: 258 ELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---FALI 428
E+ + P+ IQ +AIPV L+G+D++G A+TG+GKT +F LP++ L + R +LI
Sbjct: 240 EMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLI 299
Query: 429 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL 608
L PTRELA Q++E F G + + A+++GG M Q +LSK ++IATPGRL+D L
Sbjct: 300 LEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKGVDVLIATPGRLID-L 358
Query: 609 ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ G L + LV+DEADR+L+M F +V+ I+ ++P
Sbjct: 359 FDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLP 397
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 144 bits (350), Expect = 1e-33
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
D+ +TF+D+ + L +A + + +P+ IQK IPV LLGKDI A TG+GKT AF L
Sbjct: 178 DESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFML 237
Query: 378 PILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
P+L+ L+ P+ L+L PTREL Q+ L V + VGG+D+ Q
Sbjct: 238 PVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEA 297
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRV 719
L P ++IATPGRL+DHL N F+L ++ L++DEADR+L+ FE ++ I+R+
Sbjct: 298 ALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRL 354
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 144 bits (348), Expect = 3e-33
Identities = 70/176 (39%), Positives = 114/176 (64%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
+ K+TF+DL + + + +A +++ +++PS IQ +AIP L GKD+IG A+TG+GKT AF +
Sbjct: 3 ETKLTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGV 62
Query: 378 PILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
PI++ L+ + AL+LTPTRELA Q++E+ +G VK I GG + Q L
Sbjct: 63 PIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLR 122
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++I TPGR++DHL + +L ++ +V+DEAD +L+M F +++ IL+ P
Sbjct: 123 FGVDVVIGTPGRILDHLGRST-LDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTP 177
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 144 bits (348), Expect = 3e-33
Identities = 71/171 (41%), Positives = 109/171 (63%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
FK+LG+ D ++ E + +K+P+ IQK++IP AL G DI+G A+TG+GKTGAF +P+++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
++ Q +LIL PTRELA Q++EQ GV+ + GGM + Q L K P I
Sbjct: 64 VV-GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ TPGR++DHL N + + L++DEAD ++NM F ++ I+ IP
Sbjct: 123 VVGTPGRVIDHL-NRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIP 172
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 144 bits (348), Expect = 3e-33
Identities = 73/175 (41%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F L + + + L + KPS IQ IP+ALLGKDII A TGSGKT AF +PI++
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292
Query: 393 LLENPQRYFA---LILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 560
LL P + + ++L PTRELA Q+++ + + + G+ + VGG+++ Q ML
Sbjct: 293 LLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKS 352
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+P I+IATPGR +DH+ N+ FN+ ++ LVMDEADR+L F+ E++ I+ ++P
Sbjct: 353 RPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLP 407
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 143 bits (347), Expect = 3e-33
Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ + + C+++ ++ P+KIQ+ AIP L + +I AETGSGKT FA PILQ
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L ++P FA++LT RELA QISEQF G+S+ ++ + +VGG+D Q L + PHI
Sbjct: 64 LAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSELERIPHI 123
Query: 573 IIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ TPGR +D ++ + + +KYLV+DEADR+ ++ IL IP
Sbjct: 124 VVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADRLFEDSIIEDIQSILEFIP 176
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 142 bits (344), Expect = 8e-33
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 7/212 (3%)
Frame = +3
Query: 111 AAKXSXGAATNQASXVEQTPTEN---VNEXTEDDKITFKDLGVVDVLCEACEELKWKKPS 281
AA+ +T+ + T T N + T+++K+TF DL + + A E + P+
Sbjct: 9 AAENGIIESTDTPNTTANTDTNNEAATTDATDENKVTFTDLNIAKPILSALERSGYTHPT 68
Query: 282 KIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQAL---LENPQRYFALILTPTRELA 452
IQ EAIP AL G+D++ A+TGSGKT AF +P+L L + ALILTPTRELA
Sbjct: 69 PIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELA 128
Query: 453 FQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFN 629
Q+ + + G+ C +VGG Q L K +I+ATPGRL+DH+ N +
Sbjct: 129 QQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKGVQVIVATPGRLLDHI-NAGRVD 187
Query: 630 LRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L L+ LV+DEADR+L+M F ++ ILR P
Sbjct: 188 LSSLEILVLDEADRMLDMGFADDISDILRAAP 219
>UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04124 protein - Schistosoma
japonicum (Blood fluke)
Length = 157
Score = 142 bits (344), Expect = 8e-33
Identities = 74/153 (48%), Positives = 103/153 (67%), Gaps = 8/153 (5%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F DLG++ LC C+ +KW P+KIQ ++IP +L GKD++G+AETGSGKT AF LPI+
Sbjct: 1 MAFSDLGLIKELCFVCQRMKWDSPTKIQLKSIPTSLEGKDVVGIAETGSGKTAAFLLPII 60
Query: 387 QALLENPQRY-FALILTPTRELAFQISEQFEALG------ASIGVKCAVIVGGMDMVAQA 545
Q ++ Q FALIL PTRELA Q++ + E LG ++ ++VGG D+V QA
Sbjct: 61 QHWIKCGQPIGFALILAPTRELAQQLANEAERLGQYKSEELEFHLQVILLVGGEDVVDQA 120
Query: 546 LMLS-KKPHIIIATPGRLVDHLENTKGFNLRPL 641
L L+ +K H I+ATPGRLVDHL+ + F + L
Sbjct: 121 LKLAWRKHHFIVATPGRLVDHLKQSPNFAAQQL 153
>UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2;
Cryptosporidium|Rep: ATP-dependent RNA helicase -
Cryptosporidium hominis
Length = 499
Score = 142 bits (343), Expect = 1e-32
Identities = 73/176 (41%), Positives = 113/176 (64%), Gaps = 5/176 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F +LG+ + + C+ LK + P+ IQ ++IP L G++++G A TGSGKT + LP+LQ
Sbjct: 3 FLNLGLHKWVQDTCDSLKIQTPTAIQSKSIPYILKGRNVVGNAPTGSGKTLCYCLPMLQI 62
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS-KKPH 569
L E+P F L+L P+REL++Q+ +QF+ G + C V+ GG D Q +L+ K+PH
Sbjct: 63 LAEDPFSVFGLVLVPSRELSYQVLDQFQVFGNKVNANCQVLTGGFDESEQIHILNQKRPH 122
Query: 570 IIIATPGRLVDHLENTKGFN----LRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+I TPGRL + + G N LR L++LV+DEADR+L+ E ++ IL ++P
Sbjct: 123 ILIGTPGRL-SSIISYPGSNISDLLRNLRFLVLDEADRLLSESLEDDMLPILSILP 177
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 142 bits (343), Expect = 1e-32
Identities = 69/172 (40%), Positives = 109/172 (63%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF++LG+ + +A E + +++ + IQ + IP++L KD+IG A+TG+GKT AF +PI++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ AL++ PTRELA Q+SE+ +GA V+ I GG D+ Q L K PH
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+I+ TPGR++DH+ N L + +V+DEAD +LNM F +++ IL +P
Sbjct: 123 VIVGTPGRIIDHI-NRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVP 173
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 141 bits (342), Expect = 1e-32
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ LG+ L E C + + P+ IQ + IP L G+ ++G A TGSGKT AFALPILQ
Sbjct: 4 FQRLGIQRWLSEQCTYMALETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPILQT 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L + FAL+LTP+RELA+QI +QF A GA + V+ + VGG+ Q L +PHI
Sbjct: 64 LAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVPTETQVDALKARPHI 123
Query: 573 IIATPGRLVDHL------ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ ATPGRL HL E K F L+YLV+DEADR+ D +V +LR++P
Sbjct: 124 VAATPGRL-RHLLEVFAPEVQKAF--AHLRYLVLDEADRLTEGDILRDVQSLLRLLP 177
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 141 bits (342), Expect = 1e-32
Identities = 70/175 (40%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F+ + + + + L ++ P++IQ + IP+ALLGKDI+G A TGSGKT AF +PIL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 390 ALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
LL P++ LIL PTRELA Q + + + + +GG+ + Q L K
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+P I+IATPGR +DH+ N++GF + ++ +VMDEADR+L F E++ I++ P
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACP 434
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 141 bits (341), Expect = 2e-32
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 2/216 (0%)
Frame = +3
Query: 84 NNAHFSXMPAAKXSXGAATNQASXVEQTPT--ENVNEXTEDDKITFKDLGVVDVLCEACE 257
NN + K A+ Q S + T + + + D F G+ D + +
Sbjct: 2 NNLGYLLNVKVKRMDNASLIQQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIR 61
Query: 258 ELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTP 437
E + PS +Q ++IP+ L GKD+I A+TG+GKT AFA+PIL L N ALI+TP
Sbjct: 62 EAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNKD-IEALIITP 120
Query: 438 TRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENT 617
TRELA QISE+ LG +K + GG + Q +L KKP +IATPGRL+DHL+N
Sbjct: 121 TRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNG 180
Query: 618 KGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ + P + +V+DE+D +L+M F +++ I + +P
Sbjct: 181 RIAHFSP-QIVVLDESDEMLDMGFLDDIEEIFKFLP 215
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 140 bits (340), Expect = 2e-32
Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Frame = +3
Query: 201 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 380
+ +TF DLG+ VL + + L ++ P+ IQ +AI L G D++GLA+TG+GKT AF+LP
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 381 ILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLS 557
+L + + AL+L PTRELA Q++E F+ + I GG DM Q L
Sbjct: 63 LLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALK 122
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ P +I+ TPGR++DHL +L LK+LV+DEAD +L M F ++D IL P
Sbjct: 123 QNPQVIVGTPGRVMDHLRRGT-LDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTP 177
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 140 bits (340), Expect = 2e-32
Identities = 69/170 (40%), Positives = 111/170 (65%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K +F L + V+ E ++ + IQ+++I L G+D++G++ TGSGKTGAF +PI
Sbjct: 54 KTSFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPI 113
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
++ L+NP ++ ALI+TPTRELA QI ++F++L + + A +GG ++ +LS+K
Sbjct: 114 IEHALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRK 173
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
H+I+ TPGRL+D L N K L +K LV+DE DR+L+M F +V ++
Sbjct: 174 LHVIVGTPGRLLD-LTNRKLLKLNQVKTLVLDEFDRMLDMGFVNDVKKLV 222
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 140 bits (340), Expect = 2e-32
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Frame = +3
Query: 168 PTENVNE--XTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLA 341
P E +E T K +F++ + + + + P+ IQ++ IPVALLGKDI+G A
Sbjct: 775 PEEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSA 834
Query: 342 ETGSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAV 512
TGSGKT AF +PIL+ LL P++ IL PTRELA Q L +
Sbjct: 835 VTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQ 894
Query: 513 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 692
+VGG + Q +L K+P +IIATPGR +DH+ N+ F + L+ LV+DEADR+L F
Sbjct: 895 LVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFA 954
Query: 693 VEVDXILRVIP 725
E++ IL IP
Sbjct: 955 DELNEILTTIP 965
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 140 bits (339), Expect = 3e-32
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Frame = +3
Query: 165 TPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAE 344
T V E + D TF+ LG++ L EA L +++P+ IQ+ A+P L GKD++G+A
Sbjct: 23 TSPSTVKETSAADN-TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAA 81
Query: 345 TGSGKTGAFALPILQALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVI 515
TG+GKT AF+LP+LQ + F AL+L PTRELA Q++E G +G+ +
Sbjct: 82 TGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPL 141
Query: 516 VGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEV 695
GG + Q +L + +++ATPGR +DHL+ K L ++ +V+DEAD +L+M F
Sbjct: 142 YGGQVISQQLRVLKRGVDVVVATPGRALDHLQR-KTLKLEQVRVVVLDEADEMLDMGFAE 200
Query: 696 EVDXILRVIP 725
+++ IL P
Sbjct: 201 DLEAILSSTP 210
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 139 bits (337), Expect = 6e-32
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 5/177 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F+D G+ + + A E + P+ IQ + IP AL G+D++G+A+TG+GKT +FALPIL
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 390 ALLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
LLE+ P+ L+L+PTREL+ QI + F A G I + + +GG+ M Q L
Sbjct: 77 RLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSL 136
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ +++ATPGRL+D L + G L +++LV+DEADR+L+M F ++ I+ +P
Sbjct: 137 MQGVEVLVATPGRLLD-LVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLP 192
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 139 bits (337), Expect = 6e-32
Identities = 85/218 (38%), Positives = 128/218 (58%), Gaps = 9/218 (4%)
Frame = +3
Query: 99 SXMPAAKXSXGAATNQASXVEQTPTENVNEXT----ED--DKITFKDLGVVDVLCEACEE 260
S P + AAT + VE+T T ED D+ F DLG+ + + A EE
Sbjct: 249 SEKPVRRRRTKAATATPAVVEETVEAPAVVETVVVAEDVSDRPRFADLGLSEPIMRAIEE 308
Query: 261 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---FALIL 431
L ++ P+ IQ +AIP L G D++G+A+TG+GKT +F LP+LQ L + R +LIL
Sbjct: 309 LGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLIL 368
Query: 432 TPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLE 611
PTRELA Q++E F+ G + + A+++GG M Q +L++ ++IATPGRL+D L
Sbjct: 369 EPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLD-LF 427
Query: 612 NTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
G L LV+DEADR+L+M F +++ I+ ++P
Sbjct: 428 GRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLP 465
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 139 bits (336), Expect = 7e-32
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF G+ + +A E + P+ IQ +AIPV L G+D++G A+TG+GKT +F+LPI+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 390 ALL------ENPQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 545
LL +P R+ ALILTPTRELA Q++ A ++ AV+ GG+DM Q
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 546 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L + I+IATPGRL+DH++ K NL ++ LV+DEADR+L+M F ++ IL ++P
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQ-KTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLP 190
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 139 bits (336), Expect = 7e-32
Identities = 67/175 (38%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG + + + C+E+ KP+ +Q+ + + G + I +++TG+GKT AFALPI+
Sbjct: 5 FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPIIST 64
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L ++P +AL+++PTRELA QI +QF+ G + I+GG+ + QA L K PHI
Sbjct: 65 LSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASALEKNPHI 124
Query: 573 IIATPGRLVDHLEN-TKG---FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ATPGR++ HL + +KG F+ L+YLV+DE DR+ + +V I++ +P
Sbjct: 125 VVATPGRILHHLRSASKGNTRFSFDNLQYLVLDEVDRLFKDGYWDDVLEIIKYLP 179
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 139 bits (336), Expect = 7e-32
Identities = 74/179 (41%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
+++ G+ + + +++ +K+PS IQ+ AIPV L KD+IG+AETGSGKT AF +P++ A
Sbjct: 251 WEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLIIA 310
Query: 393 LLENPQRY--------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
+ + P +A++L PTRELA QI + +G +C +VGG Q+
Sbjct: 311 ISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSF 370
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+S+ HI++ATPGRL+D LE + F L Y+VMDEADR+L+M FE +V+ IL +P
Sbjct: 371 QMSQGAHIVVATPGRLLDCLER-RLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLP 428
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 139 bits (336), Expect = 7e-32
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Frame = +3
Query: 168 PTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAET 347
P E N + +F+ + + + + + KP+ IQ + IP+AL+GKD++G A T
Sbjct: 263 PEETENVGKKGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVT 322
Query: 348 GSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIV 518
GSGKT AF +PIL+ LL P++ ++LTPTRELA Q L + +K + V
Sbjct: 323 GSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAV 382
Query: 519 GGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVE 698
GG+ + Q L +P ++IATPGR +DH+ N+ F + ++ LV+DEADR+L F E
Sbjct: 383 GGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADE 442
Query: 699 VDXILRVIP 725
++ IL +P
Sbjct: 443 LNEILTTLP 451
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 138 bits (335), Expect = 1e-31
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Frame = +3
Query: 192 TEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAF 371
T K+ F +L + + A E+ +++ S IQ EAIPV L GKDIIG A+TG+GKT AF
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAF 63
Query: 372 ALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQAL 548
A+P ++ L + ALIL PTREL Q+SEQF L G + I GG ++ Q
Sbjct: 64 AIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLR 123
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L K P I+IATPGR++DH+ +L +K +V+DEAD +L+M F +++ IL+ P
Sbjct: 124 ALRKNPQIVIATPGRMMDHMRR-GSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTP 181
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 138 bits (335), Expect = 1e-31
Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ D L E + L ++ + IQ IP+ L G+D++GLA+TG+GKT AFALPIL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 569
+ + AL+L PTRELA Q++E F + G + G++ I GG DM Q L + H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ATPGRL+DH+E + +L + +V+DEAD +L M F +VD IL P
Sbjct: 131 IVVATPGRLLDHIER-RSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTP 181
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 138 bits (335), Expect = 1e-31
Identities = 68/173 (39%), Positives = 105/173 (60%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
ITF+D + L +A + +++ + IQ + IP+ L KD+IG A+TG+GKT AF +P++
Sbjct: 3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ + A+++ PTRELA Q+SE+ +G K I GG D+ Q L K P
Sbjct: 63 EKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNP 122
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+II+ TPGRL+DH+ N + L + +VMDEAD +LNM F +++ IL +P
Sbjct: 123 NIIVGTPGRLLDHI-NRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVP 174
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 138 bits (335), Expect = 1e-31
Identities = 70/189 (37%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Frame = +3
Query: 168 PTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAET 347
P E + + +F+++ + + + + KP+ IQ + IP++L+GKD++G A T
Sbjct: 280 PEEENQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVT 339
Query: 348 GSGKTGAFALPILQALLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIV 518
GSGKT AF +PIL+ LL P++ +ILTPTRELA Q L + +K + V
Sbjct: 340 GSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAV 399
Query: 519 GGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVE 698
GG+ + Q L +P ++IATPGR +DH+ N+ F + ++ LV+DEADR+L F E
Sbjct: 400 GGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADE 459
Query: 699 VDXILRVIP 725
++ IL +P
Sbjct: 460 LNEILTTLP 468
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 138 bits (334), Expect = 1e-31
Identities = 67/173 (38%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F ++G+ +L +A ++ + P+ +Q +AIP+AL GKDI+G A+TG+GKT AFA+P++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGV-KCAVIVGGMDMVAQALMLSKKP 566
LL P AL++ PTRELA Q++ + L V K A+++GG + Q L ++P
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRRP 122
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+I TPGR++DH+E K + LV+DE DR+ +M F ++++ I++ +P
Sbjct: 123 RIVIGTPGRIIDHIER-KTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLP 174
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 138 bits (334), Expect = 1e-31
Identities = 69/172 (40%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPIL 386
+FK+LG+ D + EA E+ + P+ IQ++AIP+ + GK DI+G A+TG+GKT AF +PIL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ + E+ + ALIL PTRELA Q++E+ +++ S + + GG + Q L +
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
I++ TPGR++DH+ + + L + Y+V+DEAD +LNM F +V+ IL+ +
Sbjct: 123 QIVVGTPGRILDHI-SRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSV 173
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 138 bits (333), Expect = 2e-31
Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 4/206 (1%)
Frame = +3
Query: 111 AAKXSXGAATNQASXVEQTPTENVNEXTEDDKI-TFKDLGVVDVLCEACEELKWKKPSKI 287
A K + + E + E T D + TF ++ + L +A + + P+ I
Sbjct: 121 AIKTKEKKVKKEKAKAEDQDLIDFEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPI 180
Query: 288 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA---LILTPTRELAFQ 458
Q IPVAL+G+DI G A TG+GKT A+ LP L+ LL P L+L PTREL Q
Sbjct: 181 QAATIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGAVTRVLVLVPTRELGVQ 240
Query: 459 ISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRP 638
+ + + L V+ + VGG+D+ Q +L K P I+IATPGRL+DHL NT F+L
Sbjct: 241 VYQVTKQLSQFTSVEVGLSVGGLDVKVQESVLRKNPDIVIATPGRLIDHLANTPTFSLDT 300
Query: 639 LKYLVMDEADRILNMDFEVEVDXILR 716
++ L++DEADR+L+ F ++ I+R
Sbjct: 301 IEVLILDEADRMLDEYFAEQMKHIVR 326
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 138 bits (333), Expect = 2e-31
Identities = 68/171 (39%), Positives = 109/171 (63%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F +G+ L + +E ++KP+ IQ ++IP+A+ G D++G A+TG+GKT +F +PIL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
+++ + AL+L PTRELA Q++E+ +L + ++ I GG + Q L + P I
Sbjct: 66 VIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+ TPGRL+DH+ N +L PLKY+V+DEAD +L+M F ++ IL P
Sbjct: 125 IVGTPGRLMDHM-NRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCP 174
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 138 bits (333), Expect = 2e-31
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
D +++ D + K++KPS IQ A PV L G D+IG+AETGSGKT +F L
Sbjct: 98 DPFLSWTDTHFPQYIMNEVTHAKFEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLL 157
Query: 378 PIL-----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 542
P + Q ++ L+L PTRELA QI + E G S +KCA I GG D +Q
Sbjct: 158 PSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGKSSKLKCACIYGGADKYSQ 217
Query: 543 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+L + ++IATPGRL+D LE ++ LR + YLV+DEADR+L+M FE+++ IL
Sbjct: 218 RALLQQGVDVVIATPGRLIDFLE-SETTTLRRVTYLVLDEADRMLDMGFEIQIRKIL 273
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 137 bits (332), Expect = 2e-31
Identities = 72/153 (47%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +3
Query: 276 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---FALILTPTRE 446
P+ IQ++ IPVALLGKD++G A TGSGKTGAF +PIL+ LL P++ IL PTRE
Sbjct: 328 PTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRE 387
Query: 447 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 626
LA Q L + +VGG + Q +L K+P +IIATPGR +DH+ N+ F
Sbjct: 388 LAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASF 447
Query: 627 NLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ L+ LV+DEADR+L F E++ IL IP
Sbjct: 448 TVDTLEILVLDEADRMLEDGFADELNEILTTIP 480
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 137 bits (331), Expect = 3e-31
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F DLG+ L +A + + P+ IQ +AIP+ + G+D++G+A+TG+GKT AFALPIL
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 393 LLEN----PQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L E+ P+R F L+L+PTRELA QI+E F G +G+ A I GG+ Q L+
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALA 186
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ATPGRL+DHL K +L ++ V+DEAD++L++ F V + I +P
Sbjct: 187 AGVDVVVATPGRLMDHL-GEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLP 241
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 137 bits (331), Expect = 3e-31
Identities = 66/157 (42%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F++LG+ L + C ++ +K+P IQ +IP L GK+++ ++TGSGKT AF+ PILQ
Sbjct: 9 FEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPILQT 68
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L ++P FA+ILT RELA QI+EQ + GAS+ ++ A+++GG+ Q +L + PHI
Sbjct: 69 LSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLGQIPHI 128
Query: 573 IIATPGRLVDHLENTKGFN--LRPLKYLVMDEADRIL 677
I+ TPGR + L F ++ +KY ++DE DR+L
Sbjct: 129 IVGTPGRCAELLSIDVNFQKYIKNVKYFILDEVDRLL 165
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 137 bits (331), Expect = 3e-31
Identities = 63/173 (36%), Positives = 109/173 (63%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F +L + + A E+ +++ + IQ++AIP+A+ GKD+IG A TG+GKT AF +P++
Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+A+ + L++ PTRELA Q++E+ +G G++ I GG D +Q L + P
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELP 121
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HI++ TPGRL++H+ + ++ V+DEAD++L+M F E + IL+ +P
Sbjct: 122 HIVVGTPGRLLEHMRR-EYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLP 173
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 137 bits (331), Expect = 3e-31
Identities = 80/179 (44%), Positives = 107/179 (59%), Gaps = 7/179 (3%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F + + L A L++ P+ IQ AIP+ALLG+DI+G A TGSGKT AF +PIL+
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 390 ALLENPQ-----RYFALILTPTRELAFQISEQFEALGASIG--VKCAVIVGGMDMVAQAL 548
L + L+L PTRELA Q +AL G V+ A++VGG+ + AQA
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAH 342
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L P I+IATPGRL+DHL NT F L L LV+DEADR+L F E++ I++ P
Sbjct: 343 TLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACP 401
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 137 bits (331), Expect = 3e-31
Identities = 75/173 (43%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF DLG+ + EA +L ++KPS IQ E IP L G+D++G+A+TGSGKT AF+LP+LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKP 566
L + L+L PTRELA Q++E + GV + GG Q L + P
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ TPGRL+DHL+ +L L LV+DEAD +L M F +V+ I+ IP
Sbjct: 127 QIVVGTPGRLLDHLKRGT-LDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIP 178
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 136 bits (330), Expect = 4e-31
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF++L ++ + +A E +K P+ IQ + IP AL G+D++G A+TG+GKT A ALPIL
Sbjct: 3 TFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILN 62
Query: 390 ALLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
L +N P AL+L PTRELA QI + F+A G + ++ +I GG+ Q L
Sbjct: 63 QLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ HI++ATPGRL+D L N L L+ V+DEADR+L+M F ++ I+ +P
Sbjct: 123 KRGAHILVATPGRLLD-LMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLP 178
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 136 bits (330), Expect = 4e-31
Identities = 71/180 (39%), Positives = 111/180 (61%), Gaps = 9/180 (5%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
+++ G D + +A +E+ + +P+ IQ++AIP+ L +D+IG+AETGSGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 393 LLENPQRY---------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 545
+ P+ +A+I+ PTRELA QI E+ G +G+K ++GG Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQG 422
Query: 546 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ L ++IATPGRL+D LEN + L Y+++DEADR+L+M FE +V +L +P
Sbjct: 423 MKLRMGVEVVIATPGRLLDVLEN-RYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMP 481
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 136 bits (329), Expect = 5e-31
Identities = 72/148 (48%), Positives = 97/148 (65%)
Frame = +3
Query: 267 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRE 446
+KKP+ IQ AIP L G+D++ LA TGSGKT A+ LP+L+ L NP++ ALIL P RE
Sbjct: 20 FKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEKLGVNPEQK-ALILVPIRE 78
Query: 447 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 626
LA Q+SE +G ++G+ + GG+D Q L+ PHI++AT GRLVD N G
Sbjct: 79 LATQVSEAINQVGQALGLNAVCLCGGVDKEQQLQALATNPHILVATTGRLVDLANN--GL 136
Query: 627 NLRPLKYLVMDEADRILNMDFEVEVDXI 710
+L + YLV+DEADR+LNM F +V I
Sbjct: 137 DLSNIHYLVLDEADRLLNMGFWPDVQNI 164
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 136 bits (329), Expect = 5e-31
Identities = 71/177 (40%), Positives = 115/177 (64%), Gaps = 4/177 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F+ LGV+ L A ++L ++KP+ IQ AIP+ L D+ A+TG+GKT AF L +L
Sbjct: 1 MSFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGML 60
Query: 387 QALL---ENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
Q L ++ QR L++ PTREL+ QI E ++ ++G+ AV+VGG D+ +Q +L
Sbjct: 61 QRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKIL 120
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ I+IATPGR+++H++ KG +L ++ V+DEADR+L+M F E+ I ++P
Sbjct: 121 KEGVDIVIATPGRVLEHVD--KGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILP 175
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 136 bits (329), Expect = 5e-31
Identities = 74/181 (40%), Positives = 111/181 (61%), Gaps = 9/181 (4%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 386
++KD + + E ++ +K+P+ IQ++AIP+ L +DIIG+AETGSGKT AF +P+L
Sbjct: 392 SWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 451
Query: 387 --------QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 542
+ E+ Q +A+IL PTRELA QI E+ G +G++ ++GG+ Q
Sbjct: 452 WITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQ 511
Query: 543 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
L I+IATPGRL+D LEN + L Y+V+DEADR+++M FE +V IL +
Sbjct: 512 GFRLRMGCEIVIATPGRLIDVLEN-RYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHM 570
Query: 723 P 725
P
Sbjct: 571 P 571
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 136 bits (328), Expect = 7e-31
Identities = 70/171 (40%), Positives = 107/171 (62%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F + + + +A L + +P+ IQ++ IP+AL GKDII ++TGSGKT AFA+PI ++
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
++ AL+L PTRELA+Q+ ++ +G VK V+ GG QAL L +K HI
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHI 125
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ TPGR++DH E T +KY+++DEAD +L+M F +V IL +P
Sbjct: 126 VVGTPGRVLDHCE-TGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLP 175
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 136 bits (328), Expect = 7e-31
Identities = 77/194 (39%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Frame = +3
Query: 159 EQTPTENVNEXTE-DDKI-----TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG 320
E+ P +++ + + D KI F L + L +AC + + P+ +Q + IP+ + G
Sbjct: 94 EEDPQQDLQQEQQLDSKIFAIDTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNG 153
Query: 321 KDIIGLAETGSGKTGAFALPILQAL--LENPQRYFALILTPTRELAFQISEQFEALGASI 494
KD++ + TGSGKT AF LPI+Q L+N Q ALI+ PTRELA Q E FE L
Sbjct: 154 KDVLASSCTGSGKTAAFLLPIMQRFGNLKNLQYSKALIILPTRELALQCFEMFEKLNKYA 213
Query: 495 GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRI 674
A+++G + + Q L K P IIIATPGR VD L N+ ++ ++ LV DEADR+
Sbjct: 214 NCTAALVIGAVPIQQQETELRKYPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRL 273
Query: 675 LNMDFEVEVDXILR 716
+ M FE E+ IL+
Sbjct: 274 MEMGFEKEIRQILQ 287
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 135 bits (326), Expect = 1e-30
Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F + L +A E++K+ PS IQ + IP+ L G+D I LA+TG+GKT AFALPILQ
Sbjct: 8 FSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQN 67
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKKPH 569
L ALIL PTRELA Q++EQFE L V AV+ GG + Q L
Sbjct: 68 LSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQ 127
Query: 570 IIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ TPGR++DH++ KG L LK ++DEAD +L M F +V+ IL +P
Sbjct: 128 VVVGTPGRILDHID--KGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLP 178
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 134 bits (325), Expect = 2e-30
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
D++ F D G + + +K P+ IQK AIP +LG+D++G A+TG+GKT AFAL
Sbjct: 48 DNENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFAL 107
Query: 378 PILQALLENPQ-RYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALM 551
P+++ L +N + L++TPTRELA Q++E F++ + S K I GG D Q
Sbjct: 108 PLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYA 167
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L +K +++ TPGR++DH+ F + + LV+DEAD +LNM F +++ I+ +P
Sbjct: 168 LKRKVDVVVGTPGRIMDHIRQGT-FKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLP 224
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 134 bits (325), Expect = 2e-30
Identities = 73/177 (41%), Positives = 112/177 (63%), Gaps = 4/177 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG+ + +A E+ + +PS IQ +AIP L G+D++ A+TG+GKT F LP+L
Sbjct: 5 MSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLL 64
Query: 387 QALL--ENPQ--RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+ L EN Q + AL+LTPTRELA Q++E + G + +K V+ GG+ + Q + L
Sbjct: 65 EILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMAL 124
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ I+IATPGR++D L N K L+ LV+DEADR+L+M F ++ IL ++P
Sbjct: 125 RRGADILIATPGRMMD-LYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILP 180
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 134 bits (325), Expect = 2e-30
Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
++++ G+ + EE+ +K+PS IQ++AIP+ L +D+IG+AETGSGKT +F +P+L
Sbjct: 268 SWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLA 327
Query: 390 ALLENPQ--------RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 545
+ + P+ ALIL PTRELA QI + +G++C IVGG DM QA
Sbjct: 328 YISKLPKLDEHTKALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQA 387
Query: 546 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L I+IATPGRL D +E L Y+VMDEAD++++M FE +V+ IL +P
Sbjct: 388 YALRDGAEIVIATPGRLKDCIER-HVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLP 446
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 134 bits (325), Expect = 2e-30
Identities = 69/172 (40%), Positives = 104/172 (60%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF+D + L E ++KPS IQ+EAIPVA+ G+DI+ A+ G+GKT AF +P L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ + ALI+ PTRELA Q S+ LG G+ C V GG ++ L L++ H
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ TPGR++D L + K +L +MDEAD++L+ DF+ ++ IL +P
Sbjct: 167 ILVGTPGRVLD-LASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLP 217
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 134 bits (324), Expect = 2e-30
Identities = 68/173 (39%), Positives = 105/173 (60%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F +LG+ E E+L + P+ IQ +AIP L G+D++G ++TG+GKT AF+LPIL
Sbjct: 3 LSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPIL 62
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ L + A++LTPTRELA Q+ + + G++ I GG + Q L L +
Sbjct: 63 ERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGV 122
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HI++ TPGR++D LE L +K+ V+DEAD +L+M F +V+ IL P
Sbjct: 123 HIVVGTPGRVIDLLER-GNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAP 174
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 134 bits (324), Expect = 2e-30
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K F D + D L ++ L ++ P+K+Q++ IP L KDII ++TGSGKT AFA+PI
Sbjct: 3 KSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPI 62
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
Q + + + AL+L PTRELA Q+ E +G +K A + G Q L +K
Sbjct: 63 CQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQK 122
Query: 564 PHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDXILR 716
H+++ TPGR++DH+E KG F+ +KYLV+DEAD + NM F +++ I++
Sbjct: 123 THVVVGTPGRIIDHME--KGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIK 172
>UniRef50_Q1JTF7 Cluster: ATP-dependent RNA helicase, putative; n=1;
Toxoplasma gondii RH|Rep: ATP-dependent RNA helicase,
putative - Toxoplasma gondii RH
Length = 574
Score = 134 bits (324), Expect = 2e-30
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF LGV L L PS IQ ++P L GK++ GLA TGSGKT + P+LQ
Sbjct: 133 TFASLGVPPALIRTAASLHIFHPSPIQVLSLPHTLRGKNVCGLAPTGSGKTLGYCWPLLQ 192
Query: 390 ALLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ F L+L P RELA Q+ +QF G +GV+ +++GG D+V + +L + P
Sbjct: 193 RIGRGDGHAFMGLVLLPARELAIQVLDQFRIYGVQLGVRVCLLLGGRDLVEEGKLLDQCP 252
Query: 567 HIIIATPGRLVDHLEN---TKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HI+IATPGR+ DH++N L + LV+DEADR+L+ +FE ++ IL +P
Sbjct: 253 HIVIATPGRMSDHVQNDPLRMKKRLSLVDVLVLDEADRLLSDEFEDDLKTILSCVP 308
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 134 bits (324), Expect = 2e-30
Identities = 66/176 (37%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Frame = +3
Query: 201 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 380
DKITF DLG+ + + +A +L ++ PS IQ+ IP L G D++G+A+TGSGKT AFALP
Sbjct: 3 DKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALP 62
Query: 381 ILQALLENPQRYFALILTPTRELAFQISEQFEA-LGASIGVKCAVIVGGMDMVAQALMLS 557
+L + + + L++ PTRELA Q+++ E + + G + + GG Q L
Sbjct: 63 LLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALK 122
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ +++ TPGR++DH+ NL L+++V+DEAD +L M F +V+ ++ +P
Sbjct: 123 QGAQVVVGTPGRILDHIRRGT-LNLSELRFIVLDEADEMLRMGFIDDVETVMAELP 177
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 134 bits (323), Expect = 3e-30
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K +F + + + A L ++ P+++Q E IPVAL KD++ ++TGSGKT +F +P+
Sbjct: 3 KKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPL 62
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
+ + + AL+LTPTRELA Q+ E +G +K A I G Q L L +K
Sbjct: 63 CEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQK 122
Query: 564 PHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HI++ TPGR++DH+E KG +L LKYLV+DEAD +LNM F +V+ I+ +P
Sbjct: 123 THIVVGTPGRVLDHIE--KGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELP 175
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 134 bits (323), Expect = 3e-30
Identities = 71/173 (41%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+FKDL + + L +A EEL + +PS IQ AIP L G+D+IG A+TG+GKT AF LP+LQ
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKP 566
+ + AL+L PTRELA Q++ AL + GV+ + GG + QA L +
Sbjct: 66 RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA 125
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ TPGR++DH+ N L ++ V+DEAD +L+M F +++ IL +P
Sbjct: 126 QVVVGTPGRILDHI-NRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMP 177
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 134 bits (323), Expect = 3e-30
Identities = 75/176 (42%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F L + L +A E+ ++ PS IQ IP L G D++G A+TG+GKT AFALP+L
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 390 AL---LENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLS 557
L ++NPQ L+L PTRELA Q++E F+ ++ G + GG MV Q L+
Sbjct: 105 RLDLAVKNPQ---VLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLA 161
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ H+I+ TPGR++DH+E K NL L LV+DEAD +L M F +V+ IL+ P
Sbjct: 162 RGAHVIVGTPGRVMDHIER-KSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTP 216
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 133 bits (322), Expect = 4e-30
Identities = 74/179 (41%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
D + +F DLG+ + + + ++ P IQ + IP+ L G D++G+A TGSGKT AF L
Sbjct: 3 DSENSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLL 62
Query: 378 PILQALLENPQRYF-ALILTPTRELAFQISE--QFEALGASIGVKCAVIVGGMDMVAQAL 548
P+LQ ++ QR+ LI+ PTRELA QI + S + AV+ GG + Q
Sbjct: 63 PLLQN-IDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFN 121
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L K PHIII TPGRL+DHL ++G ++ LK L++DEAD +L M F +++ I+R +P
Sbjct: 122 DLKKNPHIIIGTPGRLLDHL--SRGLDISKLKTLIIDEADEMLRMGFIEDIEHIIRYVP 178
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 132 bits (320), Expect = 6e-30
Identities = 78/176 (44%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F DL ++ L + +E ++ P+ IQ AIPV L G D++G+A+TG+GKT AF+LPILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 393 LLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L ++ P+ LILTPTRELA QI E EA + +K AVI GG+ Q L
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRALQ 125
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+IATPGRL+D L K L ++ V+DEADR+L+M F ++ IL ++P
Sbjct: 126 GGVDILIATPGRLMD-LHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLP 180
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 132 bits (320), Expect = 6e-30
Identities = 73/167 (43%), Positives = 105/167 (62%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF+++ + VL A ++K KP+ +Q +AIP +L G DII +A+TGSGKT AFAL +L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L + P+ LIL P+RE+A QI + F L A + V + +GG QA L K P
Sbjct: 94 TLQKKPEAR-GLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPR 152
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
+IIATPGR+ DHL K L+ ++ +V+DEADR+L+M F ++ I
Sbjct: 153 LIIATPGRMNDHLSGNK-LLLQNVEVIVLDEADRMLDMGFAPQLRTI 198
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 132 bits (320), Expect = 6e-30
Identities = 71/198 (35%), Positives = 110/198 (55%), Gaps = 1/198 (0%)
Frame = +3
Query: 135 ATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVAL 314
+T +AS E T +E + + F G + L + + + PS IQK A P +
Sbjct: 47 STTEASTTEVTAEVTADEAKSEPQSGFDGFGFSEALLKTLADKGYSDPSPIQKAAFPELM 106
Query: 315 LGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGAS- 491
LG+D++G A+TG+GKT AFALP+L+ L + L+L PTRELA Q+++ F+A A
Sbjct: 107 LGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGH 166
Query: 492 IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADR 671
+K + GG D +Q L + +++ TPGR++DH+ + L LV+DEAD
Sbjct: 167 PHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGT-LDTSGLTSLVLDEADE 225
Query: 672 ILNMDFEVEVDXILRVIP 725
+L M F +V+ IL +P
Sbjct: 226 MLRMGFIDDVEWILEQLP 243
>UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Moritella sp. PE36|Rep: ATP-dependent RNA
helicase, DEAD box family - Moritella sp. PE36
Length = 460
Score = 132 bits (320), Expect = 6e-30
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 6/177 (3%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+D G+ L + E L +++ +++Q+ AIP+ L G DI+ ++TGSGKT A+ LPILQ
Sbjct: 3 FQDFGIDPRLISSIEHLGFEQATEVQEAAIPLILGGCDIMATSQTGSGKTIAYGLPILQR 62
Query: 393 LLENPQRYF------ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+L+ QR F A+IL PTRELA Q+ + LG S+ + +I+G Q +L
Sbjct: 63 MLK--QRRFEHRAVRAVILAPTRELAIQVHANMKHLGMSLDYQIQLIIGRESFQHQEKLL 120
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
K P ++IATPGRL+DH+ K +L L++LV+DEADR+L+M F +V I P
Sbjct: 121 RKNPEVLIATPGRLLDHIRE-KSISLEHLEFLVLDEADRMLDMGFRDDVSAISNSAP 176
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 132 bits (320), Expect = 6e-30
Identities = 71/157 (45%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Frame = +3
Query: 258 ELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ-RYFALILT 434
+L + P+ IQ++ IP AL G+D+IG+A+TG+GKT AF LPILQ L+ P+ R A+I+T
Sbjct: 18 DLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVT 77
Query: 435 PTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLEN 614
PTRELA QI EALG G++ + GG+ Q L + I + PGRL+DHLE
Sbjct: 78 PTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLER 137
Query: 615 TKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L L L++DEAD++ +M F +V ILR+ P
Sbjct: 138 GT-LTLEHLDMLILDEADQMFDMGFLPDVRRILRLAP 173
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 132 bits (320), Expect = 6e-30
Identities = 72/177 (40%), Positives = 108/177 (61%), Gaps = 4/177 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG+ + +A E + PS IQ +AIP L GKD++ A+TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 387 QALLENPQ----RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+ L + + + AL+LTPTRELA Q+SE E G + ++ AV+ GG+ + Q L
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ATPGRL+D LE K L+ LV+DEADR+L+M F ++ IL ++P
Sbjct: 121 RHGVDVLVATPGRLLD-LEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLP 176
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 132 bits (320), Expect = 6e-30
Identities = 70/160 (43%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
Frame = +3
Query: 264 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ-ALLENPQRY----FALI 428
++ +PS IQ +A+P+AL G+D++G AETGSGKT AF +P+LQ L++ P R AL+
Sbjct: 137 EYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALV 196
Query: 429 LTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDH 605
L PTRELA QI ++ +A S+ +K ++VGG ++ Q L I +ATPGR +DH
Sbjct: 197 LAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDH 256
Query: 606 LENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L+ +L + Y+V+DEADR+L+M FE ++ I+R +P
Sbjct: 257 LQQ-GNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLP 295
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 132 bits (320), Expect = 6e-30
Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 9/215 (4%)
Frame = +3
Query: 108 PAAKXSXGAATNQASXVEQTPTENVNEXTEDDKIT-----FKDLGVVDVLCEACEELKWK 272
P+ K S + + + V++ T N + + T F++L + +A E++ +
Sbjct: 4 PSNKRSRDSESTEEPVVDEKSTSKQNNAAPEGEQTTCVEKFEELKLSQPTLKAIEKMGFT 63
Query: 273 KPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP---ILQALLENPQRYFALI-LTPT 440
+ +Q IP L G+D++G A+TGSGKT AF +P +L +L P+ +I +TPT
Sbjct: 64 TMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPT 123
Query: 441 RELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTK 620
RELA QI L +++GG + +A L K +++IATPGRL+DHL+NTK
Sbjct: 124 RELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTK 183
Query: 621 GFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
GF + LK L++DEADRIL + FE E+ I++++P
Sbjct: 184 GFVFKNLKALIIDEADRILEIGFEDEMRQIIKILP 218
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 132 bits (319), Expect = 8e-30
Identities = 74/179 (41%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG+ + +A E+ + P IQ++AIP L GKDI+G+A+TGSGKT +F LPIL
Sbjct: 9 MSFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPIL 68
Query: 387 QALLENP---QRYF-ALILTPTRELAFQISEQFEALGASI--GVKCAVIVGGMDMVAQAL 548
Q L P R+ AL+L PTRELA Q+ + F+A ++ +K + GG+ + Q +
Sbjct: 69 QMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMI 128
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L + I+IATPGRL+D L ++K L ++ LV+DEAD++LN+ F+ E+ I +++P
Sbjct: 129 QL-QGVEILIATPGRLLD-LVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLP 185
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 132 bits (319), Expect = 8e-30
Identities = 69/171 (40%), Positives = 101/171 (59%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ D L A E+ + +P+ IQ +A+P L G+D+ G A+TG+GKT AFALPIL
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L + +R L+L PTRELA Q+ E F+ + V+ GG+ Q L + +
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDV 254
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ ATPGRL+DH+E L ++ LV+DE DR+L+M F +V I++ P
Sbjct: 255 VAATPGRLLDHIEQGT-MTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCP 304
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 132 bits (318), Expect = 1e-29
Identities = 71/172 (41%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F +LG+ L +A ++L + KP+ +Q + IP L GKDI+ A+TGSGKT AF LP+L
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 393 LLENPQ---RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
L +P+ ALIL PTRELA Q + FE +K +I+GG Q + K
Sbjct: 63 FLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRKN 122
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRV 719
P +++ATPGRLV+H++N + L++LV+DE+DR+L+M F+ + I V
Sbjct: 123 PEVLVATPGRLVEHIKN-GNVDFSDLEFLVLDESDRMLDMGFQENMLAIAAV 173
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 132 bits (318), Expect = 1e-29
Identities = 71/173 (41%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG-KDIIGLAETGSGKTGAFALPI 383
+TF DLG+ L ++ E PS+IQ++AIPV L K+++G+A+TG+GKT AF LP+
Sbjct: 1 MTFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPV 60
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 560
LQ + + Q+ L+L PTREL Q+++ I + + GG + Q L
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLET 120
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRV 719
HI++ATPGRL+D L K NL LKYL++DEAD +LNM F ++D I+++
Sbjct: 121 PKHILVATPGRLLD-LIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKI 172
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 131 bits (317), Expect = 1e-29
Identities = 65/170 (38%), Positives = 108/170 (63%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
FK LG++ L +A +L ++ P+ IQKEAIP+ L G +++G A TG+GKT A+ LP+LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
++ ++ LI+TPTRELA Q++++ LG + V+ + GG + Q L + +
Sbjct: 64 -IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
I+ TPGR++DH+ K F +K +++DEAD +L+M F +++ IL +
Sbjct: 123 IVGTPGRILDHI-GRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTL 171
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 131 bits (317), Expect = 1e-29
Identities = 77/181 (42%), Positives = 108/181 (59%), Gaps = 5/181 (2%)
Frame = +3
Query: 186 EXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 365
E + D F LG+ + +A L + P+ IQ +AIP L KD++GLA+TG+GKT
Sbjct: 96 EQPKSDASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTA 155
Query: 366 AFALPILQALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
AFALP++Q LL NP + A+IL+PTRELA QI E F + G + + +GG
Sbjct: 156 AFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAP 215
Query: 531 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
+ Q LSK I++ATPGRL D L + KG L K+LV+DEAD++L++ F V I
Sbjct: 216 IRKQMRDLSKGVDILVATPGRLED-LVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRI 274
Query: 711 L 713
+
Sbjct: 275 I 275
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 131 bits (317), Expect = 1e-29
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 5/202 (2%)
Frame = +3
Query: 135 ATNQASXVEQTPTENVNEXTED-DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 311
A ++ VE E E T TF+ L + D ++ +E+ + + ++IQ +AIP
Sbjct: 129 AKSEEEEVEDKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPL 188
Query: 312 LLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYFA-LILTPTRELAFQISEQFEA 479
++G+D++G A TGSGKT AF +P ++ L P+ L++ PTRELA Q +
Sbjct: 189 MMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKE 248
Query: 480 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMD 659
L ++GG +A +L+K ++++ATPGRL+DHLENT GF + LK+LVMD
Sbjct: 249 LLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMD 308
Query: 660 EADRILNMDFEVEVDXILRVIP 725
EADRIL +FE ++ IL ++P
Sbjct: 309 EADRILEQNFEEDLKKILNLLP 330
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 131 bits (317), Expect = 1e-29
Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
+++ + + + EE+ +K+PS IQ++AIP+ + +D+IG+A+TGSGKT AF +P+L
Sbjct: 317 WRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDY 376
Query: 393 L-----LENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
+ L + R+ +ALI+ PTRELA QI + +G KC IVGG + Q
Sbjct: 377 IGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQF 436
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L IIIATPGRL D ++ + + +Y+VMDEADR++++ FEV+++ IL +P
Sbjct: 437 ALRDGAEIIIATPGRLKDMVDKSI-LVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMP 494
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 131 bits (316), Expect = 2e-29
Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F +LG+ + + A + P+ IQ++AIP L KD++G+A+TG+GKT AF LP+L
Sbjct: 1 MSFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPML 60
Query: 387 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L + R LIL PTRELA Q+ E F+ GA + A+++GG+ Q L+
Sbjct: 61 TILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLT 120
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ ++IATPGRL+DH E G L ++ LV+DEADR+L+M F +++ I +++P
Sbjct: 121 RGVDVLIATPGRLLDHTER-GGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVP 175
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 131 bits (316), Expect = 2e-29
Identities = 71/172 (41%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL-GKDIIGLAETGSGKTGAFALPILQ 389
F LG+ + + E +K+PS IQ++AIPV L DIIG A+TG+GKT AF LPI+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ ++ ALIL PTRELA Q++E+ ++ G+ + GG ++ Q L K
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ATPGR + +E+ K L L+YLV+DEAD +LNM F +V+ +L+ P
Sbjct: 124 LVVATPGRCIHFIEDGK-LELDSLEYLVLDEADEMLNMGFVEDVEKVLKASP 174
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 130 bits (315), Expect = 3e-29
Identities = 71/172 (41%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ L +++ +A +EL + + IQ IP + G D+IG A+TG+GKT AF +PI++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 569
+ Q+ +LIL PTREL Q+ E+ + L ++ AV+ GG Q L KPH
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+IIATPGR +DHLE K +L LK L +DEAD +L M F+ ++ IL+ IP
Sbjct: 125 LIIATPGRAIDHLERGK-IDLSALKILTLDEADEMLKMGFQEALETILKKIP 175
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 130 bits (315), Expect = 3e-29
Identities = 68/168 (40%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG-KDIIGLAETGSGKTGAFALPILQ 389
F+ G+ + A ++ + P+ IQ++A+P+ L G D IGLA TG+GKT AF +P+++
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ + AL+L+PTRELA Q++EQ LG GV+ I GG Q + + H
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAH 165
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
I++ATPGRLVD LE K L+ +K +V+DEAD +L+M F+ ++ IL
Sbjct: 166 IVVATPGRLVDFLEQ-KMIKLQSVKTVVLDEADEMLSMGFKEALETIL 212
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 130 bits (315), Expect = 3e-29
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 2/175 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TFK+L + D + A E+ + + ++IQ AIP+ L GK+I G + TG+GKT +F LPIL
Sbjct: 1 MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL 60
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 563
+ + N +R A+I+ PTRELA QI Q G+ I + A ++GG DM Q L K
Sbjct: 61 EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRL-KD 119
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL-RVIP 725
I++ TPGR+ DHL N K L ++ +++DEAD +L M F+ E+D + RV P
Sbjct: 120 SQIVVGTPGRVNDHL-NRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSP 173
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 130 bits (315), Expect = 3e-29
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF DL + + +A E ++ P+ IQ AIP AL G+D++G+A+TG+GKT +F LP++
Sbjct: 12 TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMIT 71
Query: 390 ALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
L R +L+L PTRELA Q++E F+ + + A+++GG+ Q + K
Sbjct: 72 MLARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDK 131
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++IATPGRL+DH E K L +K +V+DEADR+L+M F +++ I ++P
Sbjct: 132 GVDVLIATPGRLLDHFERGK-LILNDVKVMVVDEADRMLDMGFIPDIERIFGLVP 185
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 130 bits (315), Expect = 3e-29
Identities = 70/166 (42%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ + + + E L + K + +Q++ IP AL +D++ A TGSGKT AF +P+LQ
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 393 LLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
LL + ALIL PTRELA Q+ +Q +AL G++ +I GG + QA + K
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQAALFRKN 121
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
P IIIATPGRL+DHL+ K + ++Y ++DEADR+L+M FE +V
Sbjct: 122 PEIIIATPGRLIDHLKQKKDL-MEDVEYFILDEADRMLDMGFEEDV 166
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 130 bits (315), Expect = 3e-29
Identities = 66/176 (37%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF+ LG+ + A +L P+ IQK++IP + G+D++G+A+TG+GKTG F LP+L
Sbjct: 1 MTFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVL 60
Query: 387 QALLENPQ---RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
+ E + R AL+L+PTRELA QI + + + ++VGG+D + Q L
Sbjct: 61 HKIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLK 120
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ I++ATPGRL+DH+ L +++DEADR+L+M F +++ I+R +P
Sbjct: 121 RNWDIVVATPGRLLDHVRR-NNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLP 175
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 130 bits (315), Expect = 3e-29
Identities = 67/176 (38%), Positives = 107/176 (60%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++++ L + L A L WK P+ +Q++ IP+ L G+D + A TGSGKTGAF +P+L
Sbjct: 1 MSWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLL 60
Query: 387 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
+ ++ + + ALIL+PTRELA Q + + L + +++GG D QA L
Sbjct: 61 ERMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLR 120
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+P II+ATPGRL+D + NT F+L ++ LV+DE D++L++ F E+ I + P
Sbjct: 121 TEPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCP 176
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 130 bits (315), Expect = 3e-29
Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 5/177 (2%)
Frame = +3
Query: 198 DDKIT-FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 374
+++IT F + + L A L + P+ IQ IPVALLG+DI G A TG+GKT A+
Sbjct: 153 NEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYM 212
Query: 375 LPILQALLENPQRYFA----LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 542
LP L+ LL P A L+L PTREL Q+ + + L + + +GG+D+ AQ
Sbjct: 213 LPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQ 272
Query: 543 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+L + P I+IATPGRL+DH++NT F L ++ L++DEADR+L+ F ++ I+
Sbjct: 273 EAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEII 329
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 130 bits (313), Expect = 5e-29
Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 14/187 (7%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F +LGV + E + P+++QK IPV L G D++ A+TGSGKT AF +PIL
Sbjct: 1 MSFGELGVCPEIVELLRDKGISAPTEVQKGCIPVILEGNDVVACAKTGSGKTAAFLIPIL 60
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIG---VKCAVIVGGMDMVAQALMLS 557
Q+L+ + +ALI+TPTRELA QI EQ L G VI GG ++ Q++ L+
Sbjct: 61 QSLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLVITGGRSIIHQSIDLA 120
Query: 558 KKPHIIIATPGRLVD-----------HLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 704
+ PHII++TPGRL D ++ + + + L K +V+DEADR+L +F ++
Sbjct: 121 RSPHIIVSTPGRLADLLRTQIAAQEANVTDKQEWTLSRTKVVVLDEADRLLEDNFGKDLT 180
Query: 705 XILRVIP 725
I++ +P
Sbjct: 181 IIMKALP 187
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 129 bits (312), Expect = 6e-29
Identities = 74/177 (41%), Positives = 106/177 (59%), Gaps = 4/177 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
I +K L + + + +A EE + K + IQ +IP+ L+GKDI+ A TGSGKT AF +PI+
Sbjct: 81 IEYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIV 140
Query: 387 QAL----LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+ L + A+I++PTRELA Q + E + A +I+GG + L
Sbjct: 141 EILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHSERTRTLIIGGSSKKKEEEAL 200
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
K I++ATPGRL+DH+ NTK F R LK LV+DEADRI+ + FE E+ IL +P
Sbjct: 201 KKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLP 257
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 129 bits (312), Expect = 6e-29
Identities = 71/172 (41%), Positives = 103/172 (59%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F L + L +A +EL + +P+ IQ +AIP A+ G+D++ A TGSGKT AF LPIL
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 393 LLENPQ-RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L++ P+ AL++TPTRELA QI E L + A + GG+ + Q +
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++I TPGRL+DH L L++LV+DEADR+L+M F ++ IL+ IP
Sbjct: 123 VLIGTPGRLLDHFRAPYA-KLAGLEHLVLDEADRMLDMGFLPDIRRILKHIP 173
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 129 bits (312), Expect = 6e-29
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ + A E ++ + +Q++AIP G+D++ A+TG+GKT AFALPILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 393 LLENPQRYF-----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
+ E P ALILTPTRELA Q+++ A + + I GGM M QA L
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
+ II+ATPGRL++H+ +L +++LV+DEADR+L+M F ++ IL+ +
Sbjct: 123 QGADIIVATPGRLLEHIV-ACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAV 176
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 129 bits (312), Expect = 6e-29
Identities = 72/177 (40%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF G+ + L A L+ P+ IQ+ AIP AL G+D++G+A+TG+GKT AFALP+L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 390 ALL-----ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
L+ + ALIL+PTRELA QI+E L + V+ GG+ + Q L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ I++ATPGRL+D +E + +LR ++L++DEADR+L+M F +V I+ P
Sbjct: 125 ARGVDILVATPGRLLDLMEQ-RAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKCP 180
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 129 bits (312), Expect = 6e-29
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F DL + + L +EL ++ PS IQ IP+ L +D++G A+TG+GKT +FALPIL
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 569
+ AL+L PTRELA Q++E F+ I G I GG AQ L + H
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ TPGR++DHLE +L +K +V+DEAD +L M F +V+ IL+ P
Sbjct: 129 VVVGTPGRVIDHLEK-GSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTP 179
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 129 bits (312), Expect = 6e-29
Identities = 72/181 (39%), Positives = 112/181 (61%), Gaps = 8/181 (4%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF D + + +A + + +P+ IQ +AIPV + G D++G A+TG+GKT F+LPIL
Sbjct: 20 VTFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPIL 79
Query: 387 QALL----EN--PQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 542
L+ EN P R+ ALILTPTRELA Q++ ++ V+ GG+D+ Q
Sbjct: 80 NRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQ 139
Query: 543 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
L + ++IATPGRL+DH++ K NL ++ LV+DEADR+L+M F ++ I+ ++
Sbjct: 140 IQTLRRGVELVIATPGRLLDHVQQ-KSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLL 198
Query: 723 P 725
P
Sbjct: 199 P 199
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 129 bits (312), Expect = 6e-29
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
I + D+ + + A E ++ +PS IQ IP+AL G+D++G A TG+GKT AF +PI+
Sbjct: 4 INYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPII 63
Query: 387 QALLENP--QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
+ L P + ALILTPTRELA Q+ ++ L + + GG + +Q L +
Sbjct: 64 ERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKR 123
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
PHI++ TPGR++D L + L L+ +V+DEADR+L++ F +++ ILR P
Sbjct: 124 APHIVVGTPGRVID-LMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCP 177
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 129 bits (312), Expect = 6e-29
Identities = 73/172 (42%), Positives = 109/172 (63%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+FK LG+ D + + E+ K+++P++IQK AIP+ L GKDIIG A TGSGKT AF I+Q
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
+E AL+LTPTRELA Q+ + ++ A I GG+ + Q L ++
Sbjct: 63 K-IEKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQL-ERAD 120
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ATPGRL+DH+E +L ++ LV+DEADR+L+M F +V+ I+ P
Sbjct: 121 VVVATPGRLLDHIERGT-IDLGDVEILVLDEADRMLDMGFIDDVEEIIDECP 171
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 129 bits (312), Expect = 6e-29
Identities = 68/172 (39%), Positives = 103/172 (59%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
FK+ + + A E L + +P+K+Q+ IP AL KD++ ++TGSGKT +F +P+ +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
+ + ALILTPTRELA Q+ E +G +K + G Q L +K HI
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 573 IIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ TPGR++DH+E KG L L YLV+DEAD +LNM F +V+ I++ +P
Sbjct: 124 VVGTPGRVLDHIE--KGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLP 173
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 129 bits (311), Expect = 8e-29
Identities = 66/170 (38%), Positives = 105/170 (61%)
Frame = +3
Query: 216 KDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQAL 395
K+ + + L A E + +P++IQK++IPVA+ G DI+ ++TGSGKT A+ LP++ +
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 396 LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHII 575
++N + ALIL PTRELA QI + S + AV++GG M Q + L K P +I
Sbjct: 66 IKN--KTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVI 123
Query: 576 IATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I TPGR++DHL N + + V+DE DR+L+M + +++ I + +P
Sbjct: 124 IGTPGRIIDHL-NRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLP 172
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 129 bits (311), Expect = 8e-29
Identities = 62/174 (35%), Positives = 108/174 (62%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K TF+ + + + ++ + L + PS++Q+E IP L G++++ ++TGSGKT +FA+P+
Sbjct: 2 KYTFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPL 61
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
+ + + ALI+ PTRELA Q+ ++ +G V+C+ I G + Q L ++
Sbjct: 62 CENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQR 121
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HI++ATPGR++DH+ N L +KYLV+DEAD++ N F +++ IL +P
Sbjct: 122 VHIVVATPGRILDHI-NRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLP 174
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 129 bits (311), Expect = 8e-29
Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 2/179 (1%)
Frame = +3
Query: 195 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 374
ED I+F DL + + A E + P+K+Q E IP L G+DI A TGSGK+ AF
Sbjct: 3 EDKIISFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFL 62
Query: 375 LPILQALL--ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
+PI+Q LL ALI++PTRELA Q+ + L A + +++GG+ Q
Sbjct: 63 IPIVQKLLTFRGLPGPKALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQRE 122
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+L+ P III TPGR +D + N K L L++ V+DEADR+L FE +++ I+ +P
Sbjct: 123 LLTPAPDIIIGTPGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQLP 181
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 129 bits (311), Expect = 8e-29
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Frame = +3
Query: 240 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENP---- 407
L +A E +KKPS IQ AIP+ L +D+IG+AETGSGKT AF LP+L + P
Sbjct: 324 LLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSE 383
Query: 408 ----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHII 575
+ +A+++ PTRELA QI E+ +G + IVGG + Q L +++ I+
Sbjct: 384 ENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIV 443
Query: 576 IATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
IATPGRL+D LE L Y+V+DEADR+++M FE +V +L +P
Sbjct: 444 IATPGRLIDCLERRYAV-LNQCNYVVLDEADRMIDMGFEPQVAGVLDAMP 492
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 128 bits (310), Expect = 1e-28
Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 14/187 (7%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F DL + +L ELK+++P+ IQ +AIPV L GKD++ A+TG+GKT AFALP+L
Sbjct: 1 MSFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLL 60
Query: 387 QALLE--------------NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 524
LL N AL+L PTRELA Q+ E V ++ GG
Sbjct: 61 HQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGG 120
Query: 525 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 704
+ + Q L+ HI++ATPGRL+D L + +L L +LV DEADR+L+M F+ E+
Sbjct: 121 VSIGEQIRQLANGTHILVATPGRLLDLLRK-RALSLSQLTHLVFDEADRMLDMGFKDEIV 179
Query: 705 XILRVIP 725
+L+ +P
Sbjct: 180 EVLKRLP 186
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 128 bits (310), Expect = 1e-28
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F G+ D + + E+ ++++P IQ + IP + G+D+IG+AETGSGKT AF LP ++
Sbjct: 369 SFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIR 428
Query: 390 ALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
L+ P L++ PTREL QIS + ++G+K I GG + Q L
Sbjct: 429 HALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNAL 488
Query: 555 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+ I+I TPGRL+D L +KG NLR + +LV+DEADR+ +M F ++ I+
Sbjct: 489 KRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIV 543
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 128 bits (309), Expect = 1e-28
Identities = 72/182 (39%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Frame = +3
Query: 186 EXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 365
E T+++ F LG+ VL + E +P IQ +AIP L G+DI+G+A+TGSGKT
Sbjct: 80 ELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTA 139
Query: 366 AFALPILQALL-----ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
AF+LPILQ ++ P+ ALIL PTRELA QI + + S + A+++GG+
Sbjct: 140 AFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVS 199
Query: 531 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
++Q ++ ++IATPGRL D + + +L ++LV+DEADR+L+M F +V I
Sbjct: 200 KLSQIKRIAPGIDVLIATPGRLTDLMRDGL-VDLSQTRWLVLDEADRMLDMGFINDVKRI 258
Query: 711 LR 716
+
Sbjct: 259 AK 260
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 128 bits (309), Expect = 1e-28
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F DLG+ L +A EL +++P+ +Q AIP L+ +D+I +A+TG+GKT +F LP++
Sbjct: 1 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
Query: 387 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L R +LIL PTRELA Q++E FE G + ++++GG+ M Q L
Sbjct: 61 DILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALE 120
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
K ++IATPGRL+D E K L + LV+DEADR+L+M F +++ I +P
Sbjct: 121 KGVDVLIATPGRLLDLFERGK-ILLSSCEMLVIDEADRMLDMGFIPDIETICTKLP 175
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 128 bits (309), Expect = 1e-28
Identities = 74/176 (42%), Positives = 109/176 (61%), Gaps = 3/176 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF++L + L A EE + KP+ IQ EAIP LL KD++ A TG+GKT AF LP L
Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60
Query: 387 QALLENP---QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
Q LL++P ++ LIL PTRELAFQI + + LGA + V+ GG Q +L
Sbjct: 61 QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQ 120
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
K I++ATPGRL+ ++ + + +L ++ L++DEADR+L+M +V ++ IP
Sbjct: 121 SKIDILVATPGRLL-NIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIP 175
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 128 bits (309), Expect = 1e-28
Identities = 65/174 (37%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F +LG+ +A + + + IQ AIPVAL G+D++G+A+TG+GKT AF LP++
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 393 LLENPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
L+ + AL++ PTRELA Q++ FE + A+++GG+ Q L +
Sbjct: 64 LMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRG 123
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++IATPGRL+DH E K + +++LV+DEADR+L+M F +++ I ++ P
Sbjct: 124 VDVLIATPGRLLDHFERGK-LLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTP 176
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 128 bits (309), Expect = 1e-28
Identities = 63/153 (41%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Frame = +3
Query: 267 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ-RYFALILTPTR 443
+K+P+ IQ +AIP + G D+IGLA+TG+GKT A+ALPI+Q +L P+ R L++ PTR
Sbjct: 21 YKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTR 80
Query: 444 ELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG 623
ELA QIS+ F +LG ++ I GG++M Q L +++A PGRL+DH+
Sbjct: 81 ELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGT- 139
Query: 624 FNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
++ ++ L++DEADR+ +M F+ ++ IL+ +
Sbjct: 140 IDVCGVETLIIDEADRMFDMGFQPDIQSILKCL 172
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 128 bits (309), Expect = 1e-28
Identities = 63/168 (37%), Positives = 107/168 (63%), Gaps = 1/168 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKD-IIGLAETGSGKTGAFALPILQ 389
F+ +G+ D + A + ++ P+ IQ++ IP+ L GK+ +IG A+TG+GKT AF +P+++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
L E AL+LTPTRELA Q+ + ++L + + + GG+ + Q L ++
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+++ TPGR++DHL N ++ +KYLV+DEAD +L+M F +V+ IL
Sbjct: 124 LVVGTPGRIIDHL-NRGTLDITKIKYLVIDEADEMLDMGFIEDVEMIL 170
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 128 bits (309), Expect = 1e-28
Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
T+++ + + EA +L ++KPS IQ ++IP++L G+DI+G+AETGSGKT AF +P+L
Sbjct: 414 TWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLI 473
Query: 390 ALLENPQRY--------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 545
+ + P+ +AL++ PTREL QI ++ G + +VGG + QA
Sbjct: 474 YISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQA 533
Query: 546 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+SK IIIATPGRL D LE + L Y+V+DEAD ++++ FE +V +L +P
Sbjct: 534 YQVSKGCEIIIATPGRLNDCLEK-RYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMP 592
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 128 bits (309), Expect = 1e-28
Identities = 63/158 (39%), Positives = 104/158 (65%), Gaps = 5/158 (3%)
Frame = +3
Query: 264 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENP-QRYF----ALI 428
K++KP+ +Q P+AL G D++G+++TGSGKT +F LP ++ +L P Q Y+ L+
Sbjct: 158 KFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLV 217
Query: 429 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL 608
+ PTRELA QI+++ E + ++ A I GG +Q L LS++P I++ TPGR++D +
Sbjct: 218 VAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFM 277
Query: 609 ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
E + +L+ + +LV+DEADR++ M FE ++D I I
Sbjct: 278 E-SGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSI 314
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 128 bits (309), Expect = 1e-28
Identities = 67/173 (38%), Positives = 103/173 (59%), Gaps = 5/173 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
I+F G + + + +L++ +P++IQ +A+P+AL G+DIIG+A+TGSGKT AF P L
Sbjct: 106 ISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 165
Query: 387 QALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 551
+++ P+ LI PTREL QI + G + + + GG + Q+
Sbjct: 166 VHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKA 225
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
L + I++ATPGRL+DH++ K NL + YLV DEADR+ +M FE +V I
Sbjct: 226 LQEGAEIVVATPGRLIDHVK-AKATNLHRVTYLVFDEADRMFDMGFEPQVRSI 277
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 128 bits (308), Expect = 2e-28
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Frame = +3
Query: 240 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF 419
L +A E+ +K+P+ IQ++AIP+AL G DI+G A TG+GKTGAFA+PI++ L +
Sbjct: 11 LQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVK 70
Query: 420 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA-LMLSKKPHIIIATPGRL 596
AL+LTPTRELA Q+ EQ L + V GG + ++ +K I+I TPGR+
Sbjct: 71 ALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRI 130
Query: 597 VDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
D L + K NL ++YLV+DE D++L+M F +++ I+ +P
Sbjct: 131 KD-LIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLP 172
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 128 bits (308), Expect = 2e-28
Identities = 69/171 (40%), Positives = 103/171 (60%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F + + + ++ +E+ ++KP+KIQ+ +P A GKDIIG A+TG+GKT AFA+PIL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
L + R L++ PTRELA QI +Q LG K A+I+GG+ Q L+ +I
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ATPGRL D L K +L +K +DEAD +L + F E+ I+ +P
Sbjct: 123 VVATPGRLEDLLAQNK-IDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLP 172
>UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=8; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio vulnificus
Length = 447
Score = 128 bits (308), Expect = 2e-28
Identities = 72/172 (41%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ FKDLG+ + L + + L ++K +KIQ++AIPVA+ GKD++ ++TGSGKT AF LP+L
Sbjct: 5 LQFKDLGLDNRLLKNLKHLDFQKATKIQQQAIPVAIAGKDLLASSKTGSGKTLAFVLPML 64
Query: 387 QALLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
L+ + + +IL PTRELA Q+ + + + +IVGG + Q L
Sbjct: 65 HKSLKTKALSARDPRGVILAPTRELAKQVYGELRTMLGGLSYDATLIVGGENFNDQVKAL 124
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
++ P I+ATPGRL DHLE+ F L L+ LV+DEADR+L++ F E+ I
Sbjct: 125 ARYPKFIVATPGRLADHLEHKSVF-LEGLETLVLDEADRMLDLGFAPELRRI 175
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 128 bits (308), Expect = 2e-28
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F D+ + + E +++ P+ IQ +AIP L G+D++G A+TG+GKT AF LP L
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 563
+ + ++ L++TPTRELA Q++E E A + GV A + GG Q L +
Sbjct: 68 AKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQG 127
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ TPGRL+D L N L LK V+DEAD +LNM F +++ IL+ +P
Sbjct: 128 TAIVVGTPGRLID-LLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVP 180
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 128 bits (308), Expect = 2e-28
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ + A + +++PS IQ +AIPV L G D+IG A+TG+GKT AFALP+L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 569
+ + LIL PTRELA Q++ FE + + GV + GG M Q L +
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ATPGRL DHL + L +K+LV+DEAD +L + F +++ I +P
Sbjct: 145 ILVATPGRLCDHLRRDEQL-LSTVKHLVLDEADEMLKLGFMEDLEVIFAALP 195
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 128 bits (308), Expect = 2e-28
Identities = 63/172 (36%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
FKDLG+ + EA E + + + + IQ++ IP+ + GKD+ G A+TG+GKT AF +P ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ + + +LIL PTRELA Q+ + + L G++ + GG + Q L H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ TPGR++DHL+ + N L +++DEAD +LNM F +++ IL +P
Sbjct: 123 IVVGTPGRIIDHLDR-RTLNASHLSQIILDEADEMLNMGFREDIELILTRLP 173
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 128 bits (308), Expect = 2e-28
Identities = 69/172 (40%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVAL-LGKDIIGLAETGSGKTGAFALPILQ 389
F+D G+ + + A ++ ++KP++IQK +P AL KD+I A+TG+GKT AF +P+L+
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 390 ALLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ ++ A+I+TPTRELA QI E+ ++L + VK + GG + Q L K
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGV 139
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
I++ TPGR++DHL N +L ++YLV+DEADR+L+M F +D +L +I
Sbjct: 140 DIVVGTPGRIIDHL-NRDTLDLSHVEYLVLDEADRMLDMGF---LDDVLEII 187
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 128 bits (308), Expect = 2e-28
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
T K L + + +A + + S IQ +++P AL GKD+IG A+TGSGKT F +P L+
Sbjct: 5 TVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALE 64
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKP 566
+ N A++L PTRELA Q+++Q + IG +K + GG M Q L P
Sbjct: 65 KIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSP 124
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HII+ TPGR++DH+E + +LR +K V+DEADR+L+M FE ++ I P
Sbjct: 125 HIIVGTPGRVMDHVEKRR-IDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTP 176
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 128 bits (308), Expect = 2e-28
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 11/176 (6%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F + + + + K+ +P+ IQK AIP+ L GKD++G A+TGSGKT AF LP+L
Sbjct: 270 LNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMGCAQTGSGKTAAFLLPVL 329
Query: 387 QALLEN-----------PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDM 533
+++N PQ A+I+ PTREL QI + +S V+ V+ GG +
Sbjct: 330 TGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYLEARKFASSTCVRPVVVYGGTSV 389
Query: 534 VAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
QA L K H+++ TPGRL+D + K NL +KYL++DEADR+L+M FE E+
Sbjct: 390 GYQARELEKGAHVVVGTPGRLLDFIGKGK-INLSKVKYLILDEADRMLDMGFEPEI 444
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 128 bits (308), Expect = 2e-28
Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 7/188 (3%)
Frame = +3
Query: 183 NEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKT 362
++ T D + +F + + A L + KP+ IQ IP+AL GKDI+ A TGSGKT
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKT 384
Query: 363 GAFALPILQALL-------ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVG 521
AF +P ++ L + + LIL PTRELA Q +++ ++ + VG
Sbjct: 385 AAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVG 444
Query: 522 GMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
G+ + +Q L +P ++IATPGRL+DH+ N+ F L ++ LVMDEADR+L F E+
Sbjct: 445 GLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADEL 504
Query: 702 DXILRVIP 725
+ I++ P
Sbjct: 505 NEIVKSCP 512
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 127 bits (307), Expect = 2e-28
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Frame = +3
Query: 192 TEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAF 371
TE + + F LG+ + L A + + + IQ IP L GKD++G A+TG+GKT AF
Sbjct: 10 TEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAF 69
Query: 372 ALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQAL 548
LP L + + ++ ++L PTRELA Q++E E+ G + G++ A + GG Q
Sbjct: 70 GLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQ 129
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L + +++ TPGRL+DHL K L L+ V+DEAD +LNM F ++ IL IP
Sbjct: 130 QLERGAQVVVGTPGRLMDHLRR-KSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIP 187
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 127 bits (307), Expect = 2e-28
Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 5/178 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG+ + +A E + PS IQ +AIP L GKD++ A+TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 387 QALLENPQ----RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+ L + + + AL+LTPTRELA Q+SE E G + ++ AV+ GG+ + Q L
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120
Query: 555 SKKPHIIIATPGRLVDHL-ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ATPGRL+D + +N FN L+ LV+DEADR+L+M F ++ IL ++P
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNVVKFN--QLEILVLDEADRMLDMGFIRDIKKILALLP 176
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 127 bits (307), Expect = 2e-28
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 8/183 (4%)
Frame = +3
Query: 198 DDKIT----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 365
D KIT FKDL + D + E + K ++IQ ++IPV+L G D++ A+TGSGKT
Sbjct: 34 DPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTL 93
Query: 366 AFALPILQALLENPQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDM 533
AF +P+++ L F ALI++PTRELA QI E +G+ +++GG D+
Sbjct: 94 AFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDV 153
Query: 534 VAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+ +S + +I+I TPGR++ HL+ G N L+ LV+DEADR L+M F+ +D I+
Sbjct: 154 KFELERIS-RINILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIV 212
Query: 714 RVI 722
+
Sbjct: 213 STL 215
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 127 bits (306), Expect = 3e-28
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F DL + L A +E + KP+ IQ ++IP+ L G+D++GLA+TG+GKT +FALP+L
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 393 LLENPQ-----RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L P+ L+L PTREL QI++ FE+ V+ I GG+ V Q L
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALE 128
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ II+A PGRL+D +E +L L+ LV+DEAD++L+M F ++ I+ +P
Sbjct: 129 EGVDIIVAAPGRLLDLIEQGL-CDLSQLETLVLDEADQMLDMGFAKPIERIVATLP 183
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 127 bits (306), Expect = 3e-28
Identities = 65/178 (36%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG++D L ++L ++ P+ +Q +AIP L GKD++ A+TG+GKT FALP+L
Sbjct: 1 MSFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 60
Query: 387 QALLE-----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 551
Q L++ + R L+L PTRELA Q+ + F A G + ++ GG+ + Q +
Sbjct: 61 QRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMK 120
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L K +++ATPGRL+D L ++ LV+DEADR+L++ F E++ + +P
Sbjct: 121 LRKGVDVLVATPGRLLD-LNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALP 177
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 127 bits (306), Expect = 3e-28
Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 4/177 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF D L ++ + + KP+ IQ EAIPV + D++ A+TG+GKT A+ LPIL
Sbjct: 1 MTFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPIL 60
Query: 387 QALLE-NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA---QALML 554
++E N L+L PTRELA QI +Q E I V + GG D Q L
Sbjct: 61 HKIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKAL 120
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ +I+IATPGRL+ L++ NL+ +K+LV+DEADR+L+M F ++ ++ +P
Sbjct: 121 TDGANIVIATPGRLLAQLQSGTA-NLKQIKHLVLDEADRMLDMGFYDDIVRVISYLP 176
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 127 bits (306), Expect = 3e-28
Identities = 65/173 (37%), Positives = 106/173 (61%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F + + + A +++ ++ + IQ +PV L G D++G A+TG+GKT AFA+P+L
Sbjct: 4 LEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVL 63
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ L E + ALI+ PTREL Q+SE+ + +G + VK + GG + Q L +
Sbjct: 64 ENL-EAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGV 122
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
H+I+ATPGRL+DH+E +L + +V+DEAD +LNM F +++ IL +P
Sbjct: 123 HVIVATPGRLIDHIERGT-VDLGGISTVVLDEADEMLNMGFIDDIERILSHVP 174
>UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9143-PA - Tribolium castaneum
Length = 643
Score = 126 bits (305), Expect = 4e-28
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 11/203 (5%)
Frame = +3
Query: 138 TNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL 317
+ Q S VE N D + + + G+ D + +A + +P+ IQ ++P A+L
Sbjct: 76 SKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGFNEPTLIQSLSLPAAVL 135
Query: 318 GK-DIIGLAETGSGKTGAFALPILQALLE--------NPQRYFALILTPTRELAFQISEQ 470
G+ DI+G AETGSGKT AF LPI+ +L + ++ +AL+LTPTRELA Q+ +
Sbjct: 136 GRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVVGNSDKKLYALVLTPTRELAVQVRDH 195
Query: 471 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLE--NTKGFNLRPLK 644
+A+ + AV++GGM V Q +LSK+P I++ATPGRL + ++ N + ++
Sbjct: 196 LKAIVKFTDINIAVVLGGMAAVKQERILSKRPEIVVATPGRLWELIQQGNEHLSQINDIR 255
Query: 645 YLVMDEADRILNMDFEVEVDXIL 713
YL +DE DR+L E+ IL
Sbjct: 256 YLAIDETDRMLEKGHFEELHNIL 278
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 126 bits (305), Expect = 4e-28
Identities = 66/172 (38%), Positives = 106/172 (61%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
I F +L + + + +A E+ +++PS IQ +AIP L G D+IG A+TG+GKT AF +P++
Sbjct: 6 IKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV 65
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ + + ALILTPTRELA Q+S + + L ++ I GG +V Q L +
Sbjct: 66 EKV-STGRHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGV 124
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
++I TPGR++DHL K L + +++DEAD +L+M F +++ ILR +
Sbjct: 125 QVVIGTPGRIIDHLRR-KTLILDHVNTVILDEADEMLDMGFIDDIESILRQV 175
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 126 bits (305), Expect = 4e-28
Identities = 75/179 (41%), Positives = 102/179 (56%), Gaps = 6/179 (3%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG+ D L +K+P+ IQ +AIP L G D+I AETGSGKT F LP+L
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 387 QALLENP----QRYFALILTPTRELAFQISEQFEALGASI--GVKCAVIVGGMDMVAQAL 548
+ L P AL+L PTRELA Q+S+ + + ++ I GG + Q
Sbjct: 61 EKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQ 120
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
LSK I++ATPGRL+D L +LR LK LV+DEADR+L++ F E+D IL P
Sbjct: 121 SLSKGCDIVVATPGRLLD-LMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTP 178
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 126 bits (305), Expect = 4e-28
Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 2/169 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQ 389
F+ LG+ L ++ ++ P++IQ+++IP+ L D IGLA+TG+GKT AF LP+L
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKP 566
+ N + ALIL PTRELA QI Q E + +G + + GG +++ Q + +
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
II+ATPGRL+D L + L LKY+V+DEAD +LNM F+ ++D IL
Sbjct: 135 QIIVATPGRLMD-LMKRREVKLDALKYMVLDEADEMLNMGFKEDIDFIL 182
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 126 bits (305), Expect = 4e-28
Identities = 72/169 (42%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 386
+F D+G D + + E+ + +P+ IQ + P+AL G+D+IG+AETGSGKT A+ LP +
Sbjct: 97 SFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTIAYLLPAIV 156
Query: 387 ----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
Q +L++ L+L PTRELA QI ++ GAS +K I GG+ Q L
Sbjct: 157 HVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDL 216
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
K I+IATPGRL+D LE+ NLR + +V+DEADR+L+M FE ++
Sbjct: 217 QKGVEIVIATPGRLIDMLESNH-TNLRRVT-IVLDEADRMLDMGFEPQI 263
>UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 126 bits (305), Expect = 4e-28
Identities = 67/179 (37%), Positives = 108/179 (60%), Gaps = 4/179 (2%)
Frame = +3
Query: 201 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 380
DK+ F DL + D+ A ++ + ++IQ +IP +LG D++ A+TGSGKT AF +P
Sbjct: 85 DKL-FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIP 143
Query: 381 ILQALLE---NPQRYFALI-LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
++ L +P+ +I L PTRELA Q + L ++GG+D+ +A
Sbjct: 144 AIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAE 203
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L+K ++++ATPGRL+DH++ TK F LK L++DEADRIL +FE ++ I +++P
Sbjct: 204 QLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLP 262
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 126 bits (305), Expect = 4e-28
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
Frame = +3
Query: 240 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL-----QALLEN 404
+ + E +K+P+ IQ ++ P+AL G+D+IG+AETGSGKT AF LP + QALL
Sbjct: 221 ILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQALLRP 280
Query: 405 PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIAT 584
L+L PTRELA QI E G S +K +V GG+ Q + L + I+IA
Sbjct: 281 GDGPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIAC 340
Query: 585 PGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
PGRL+D LE++ NLR + YLV+DEADR+L+M FE ++ I+
Sbjct: 341 PGRLIDFLESSV-TNLRRVTYLVLDEADRMLDMGFEPQIRKIV 382
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 126 bits (305), Expect = 4e-28
Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 5/195 (2%)
Frame = +3
Query: 144 QASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 323
Q +E+ + + E +TF++L + + E +E W P+ IQ +IP+ L G
Sbjct: 64 QKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGN 123
Query: 324 DIIGLAETGSGKTGAFALPIL-----QALLENPQRYFALILTPTRELAFQISEQFEALGA 488
D++G+A+TGSGKT +F +P L Q + L+L+PTRELA Q E
Sbjct: 124 DMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCV 183
Query: 489 SIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 668
+G K I GG D Q L P I+ ATPGRL+D L++ FN +LV+DEAD
Sbjct: 184 KMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGV-FNPNRANFLVLDEAD 242
Query: 669 RILNMDFEVEVDXIL 713
R+L+M FE ++ I+
Sbjct: 243 RMLDMGFEPQIRAII 257
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 126 bits (305), Expect = 4e-28
Identities = 68/171 (39%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF +L + + L EA ++ + +P+ IQ AIP AL G+D++G A TG+GKT A+ LP LQ
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 390 ALLENPQRYFA----LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
LL+ P++ LILTPTRELA Q+S+ L + A I GG+ + A + S
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFS 124
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
+ I++AT GRL+ +++ + F+ R ++ L++DEADR+L+M F +++ I
Sbjct: 125 ENQDIVVATTGRLLQYIKE-ENFDCRAVETLILDEADRMLDMGFAQDIEHI 174
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 126 bits (305), Expect = 4e-28
Identities = 69/174 (39%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Frame = +3
Query: 195 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAF 371
E + + F +L + D + A ++KP+ IQ + IP+ L + +I+ A TGSGKT +F
Sbjct: 2 EVEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASF 61
Query: 372 ALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 551
A+P+++ + EN A+ILTPTRELA Q++++ E+L + +K A I GG + Q
Sbjct: 62 AIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKA 120
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
L K +I++ TPGR++DH+ N NL+ +KY ++DEAD +LNM F +V+ IL
Sbjct: 121 L-KNANIVVGTPGRILDHI-NRGTLNLKNVKYFILDEADEMLNMGFIKDVEKIL 172
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 126 bits (304), Expect = 6e-28
Identities = 69/167 (41%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
+++ + D L + + KP+K+Q+++IP AL G+D++ A TG+GKT AF LP LQ
Sbjct: 5 WEEFDLDDRLIAVLRDAELNKPAKVQQQSIPAALDGRDLLISAPTGTGKTLAFLLPALQH 64
Query: 393 LLENPQRYFA----LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
LL+ P++ L+L PTRELA QI EQ + A G+ V+ GG++ +Q +L K
Sbjct: 65 LLDFPRQQPGPARILVLAPTRELAEQIHEQAKQFEAKTGLTSVVVTGGINYGSQLSVLEK 124
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
I++ATPGRL+D LE + +NL +++L++DEADR+L+M F V
Sbjct: 125 THDILVATPGRLMDLLE-AEQYNLEGIEWLIIDEADRMLDMGFAATV 170
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 126 bits (304), Expect = 6e-28
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 7/181 (3%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K+ F DL + L A +E+ ++ S IQ +P AL G D IG A+TG+GKT AF +
Sbjct: 26 KVRFHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITA 85
Query: 384 LQALLEN--PQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 545
+ LLE+ ++Y ALIL PTRELA QI+E +AL +K A +VGGMD Q
Sbjct: 86 ITDLLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQK 145
Query: 546 LML-SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
L ++ I++ATPGRL+D + N K L ++ L++DEADR+L+M F ++ I+R
Sbjct: 146 QQLHEQRTDILVATPGRLIDFM-NRKAVFLDQIEMLIIDEADRMLDMGFIPDIKTIVRAT 204
Query: 723 P 725
P
Sbjct: 205 P 205
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 126 bits (304), Expect = 6e-28
Identities = 72/170 (42%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Frame = +3
Query: 240 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE-NPQRY 416
L +A ++ K++KP+ IQ +AIP+AL +D+IG+AETGSGKT AF LP+L + + P Y
Sbjct: 709 LLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTY 768
Query: 417 -------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHII 575
+AL++ P+RELA QI E+ + + +VGG + AQA L + I+
Sbjct: 769 ETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIV 828
Query: 576 IATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I TPGRL D LE L Y+++DEADR+++M FE V IL IP
Sbjct: 829 IGTPGRLQDCLEKAYTV-LNQCNYVILDEADRMMDMGFEDTVHYILDKIP 877
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 126 bits (304), Expect = 6e-28
Identities = 67/174 (38%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+TF++L + D + + + KW+KP+ IQ +IPVAL G D+IG+A+TGSGKT AF +P +
Sbjct: 125 LTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAM 184
Query: 387 QAL-LENPQRY----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 551
+ L+ P L+L+PTRELA QI+E + ++ ++ + GG QA
Sbjct: 185 VHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQAND 244
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
L P +++ATPGRL+D +E + + + +LV+DEAD++L+M FE ++ I+
Sbjct: 245 LRHLPSLVVATPGRLIDFIEGGQ-CPMNRVNFLVLDEADQMLDMGFEPQIRKII 297
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 126 bits (304), Expect = 6e-28
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF+D G + A ++ ++KP+ IQ +A+P+ L G+D+IG+A+TGSGKT AF LP++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 390 ALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+++ P+ +I PTRELA QI + + + G++ + + GGM Q L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
I++ATPGRL+D L+ K + YLV+DEADR+ ++ FE +V I+
Sbjct: 349 KAGCEIVVATPGRLIDMLK-MKALTMMRASYLVLDEADRMFDLGFEPQVRSIV 400
>UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 642
Score = 126 bits (303), Expect = 7e-28
Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Frame = +3
Query: 141 NQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG 320
++A+ + PT + D F DL V +A +++K+ + IQ IP L G
Sbjct: 132 SKATEQQDAPTSRAGFFSND---LFDDLEVCKPTKDALKQMKFTNMTHIQSRTIPHLLKG 188
Query: 321 KDIIGLAETGSGKTGAFALPILQALLEN----PQRYFALILTPTRELAFQISEQFEALGA 488
+D++G A+TGSGKT AF +P ++ L + +++TPTRELA QI + + L
Sbjct: 189 RDVLGAAKTGSGKTLAFLIPAIEMLYKTNFVQSMGTGIIVITPTRELATQIYDVAKQLMF 248
Query: 489 SIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 668
+++GG + A+A+ L ++IIATPGRL+DHL+NT GF L L++DEAD
Sbjct: 249 FHSKTLGLLIGGANRKAEAIKLKTGVNMIIATPGRLLDHLQNTAGFAYHNLLGLIIDEAD 308
Query: 669 RILNMDFEVEVDXILRVIP 725
IL + F+ E+ IL+++P
Sbjct: 309 AILRIGFQEELTEILKLLP 327
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 126 bits (303), Expect = 7e-28
Identities = 69/175 (39%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
+ F DLG+ L E + P+ +Q+++IP L GKD++ A+TG+GKT AF LPI+
Sbjct: 7 VNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPII 66
Query: 387 QALLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
QA+ + + ALIL PTRELA Q+ + ++ + GG + Q L +
Sbjct: 67 QAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEE 126
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+IATPGRL+DHL N N+ LV+DEADR+L+M F ++ ILR +P
Sbjct: 127 GADILIATPGRLLDHLFN-GNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLP 180
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 126 bits (303), Expect = 7e-28
Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Frame = +3
Query: 240 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN--PQR 413
L A E+ W +P+ +Q +IP AL GKD++ AETGSGKT A+ LP L +L P+
Sbjct: 11 LTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHRVLSERKPKA 70
Query: 414 YF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPG 590
L++ PTRELA Q+ + EAL G+K +I GG + QA +L + P I+IATPG
Sbjct: 71 GIRVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQASLLRRNPEIVIATPG 130
Query: 591 RLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEV 701
R+ +HL N +L ++ LV+DE DR+L+M F EV
Sbjct: 131 RMTEHL-NKNSTDLLDVECLVLDECDRMLDMGFRDEV 166
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase PRP28,
putative; n=2; Eukaryota|Rep: Pre-mRNA splicing factor
RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 126 bits (303), Expect = 7e-28
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Frame = +3
Query: 240 LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE-NPQRY 416
L +A ++ K++KP+ IQ +AIP+AL +D+IG+AETGSGKT AF LP+L + + P Y
Sbjct: 592 LLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTY 651
Query: 417 -------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHII 575
+ALI+ P+RELA QI ++ + + +VGG + AQA L K II
Sbjct: 652 ETSQDGPYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFELRKGVEII 711
Query: 576 IATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I TPGR+ D LE L Y+++DEADR+++M FE V IL IP
Sbjct: 712 IGTPGRIHDCLEKAYTV-LNQCNYVILDEADRMMDMGFEDSVHFILDKIP 760
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 126 bits (303), Expect = 7e-28
Identities = 66/173 (38%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF DL + + A ++ ++ P+ IQ IP + G D++GLA+TG+GKT AFA+P+L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 390 ALLENPQRYFALILTPTRELAFQISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKP 566
+ + AL+L PTRELA Q++E F GA + + I GG Q L +
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ TPGR++DHLE +L + +LV+DEAD +L M F +V+ IL P
Sbjct: 134 QVVVGTPGRMIDHLERAT-LDLSRVDFLVLDEADEMLTMGFADDVERILSETP 185
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 126 bits (303), Expect = 7e-28
Identities = 72/174 (41%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
I F+ + +VL ++ ++ P+ IQ + IPV LLG+DI+ A+TGSGKT AF LP++
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK 563
L + ALILTPTRELA QI Q + L + + +K ++VGG+ + Q L +
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH 322
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+IIATPGRL+D ++ + L +K +V+DEAD +L M F+ +V IL IP
Sbjct: 323 VKVIIATPGRLLDIIKQS-SVELCGVKIVVVDEADTMLKMGFQQQVLDILENIP 375
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 125 bits (302), Expect = 1e-27
Identities = 73/175 (41%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK--DIIGLAETGSGKTGAFALPI 383
TF++LGV + +A EE+ ++ P +Q+E IP LLG+ D++ LA+TG+GKT AF LP+
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPY-LLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 560
LQ + + +LIL PTREL QI+ I G+K + GG + +Q L +
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HII+ATPGRL+D +E K +L + +VMDEAD +LNM F ++ IL +P
Sbjct: 122 GVHIIVATPGRLLDLMER-KTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVP 175
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 125 bits (302), Expect = 1e-27
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ L A EE +++PS IQ+++IP L GKD++GLA+TG+GKT AF LP+L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGA-SIGVKCAVIVGGMDMVAQALMLSKKPH 569
+ L+L PTRELA Q++ E+ VK A I GG D +Q L + P
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ TPGR++DH+ L ++ +V+DEAD +L M F +VD +L +P
Sbjct: 128 WVVGTPGRVMDHIRRGT-LKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVP 178
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 125 bits (302), Expect = 1e-27
Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
+++F +LG+ + EA + ++ PS IQ ++IP L G ++G+A+TG+GKT AFALP+
Sbjct: 23 ELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPL 82
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 560
L + N L+L PTRELA Q++E F + I GG D Q L +
Sbjct: 83 LSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKR 142
Query: 561 KPHIIIATPGRLVDHLENTKG-FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+I+ TPGR++DHL KG L LK LV+DEAD +L M F +V+ IL P
Sbjct: 143 GAQVIVGTPGRMLDHLR--KGTLKLDGLKALVLDEADEMLRMGFIDDVEAILAKTP 196
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 125 bits (302), Expect = 1e-27
Identities = 68/175 (38%), Positives = 101/175 (57%), Gaps = 7/175 (4%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
T+ GV E L ++KP+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+ +
Sbjct: 511 TWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFR 570
Query: 390 ALLENPQR-----YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+L+ P A+I+ PTREL QI + S+G++ + GG + Q L
Sbjct: 571 HILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAEL 630
Query: 555 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+ II+ TPGR++D L G NLR + Y+V+DEADR+ +M FE +V I+
Sbjct: 631 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRII 685
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 125 bits (302), Expect = 1e-27
Identities = 65/175 (37%), Positives = 106/175 (60%), Gaps = 4/175 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F DL + + ++ + +Q+ AIP+AL G+DI+G A+TGSGKT AF +P+L+
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 393 LLENPQRYF----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
L + ALI++PTRELA QI E +G + +++GG + +A L +
Sbjct: 115 LYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHFFSAGLVIGGKSLKEEAERLGR 174
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+I++ TPGR++ HL+ T F++ L+ LV+DEADRI++M F+ VD ++ +P
Sbjct: 175 M-NILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLP 228
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 125 bits (302), Expect = 1e-27
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ +G+ L A + +K P+ IQ++ IP+ L G+D++G+A TGSGKT AF +P+++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 393 L---LENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
L L N ALIL+P RELA Q + + ++ IVGG+ + Q +LS K
Sbjct: 131 LKSTLANSNTR-ALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGK 189
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
P I++ATPGR + HL+ L ++Y+V DEADR+ M F ++ IL +P
Sbjct: 190 PDIVVATPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALP 242
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 125 bits (301), Expect = 1e-27
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 2/162 (1%)
Frame = +3
Query: 246 EACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFAL 425
EA E+ + KKP+ IQ IP AL G+DIIG ++TG+GKT +F LPI+Q + Q A+
Sbjct: 15 EALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAI 74
Query: 426 ILTPTRELAFQISEQFEALGASIG--VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 599
I+ PTRELA+QI E+ +++ +K ++I GGMD Q + P I+I TPGR++
Sbjct: 75 IVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRVKVSPQIVIGTPGRIL 134
Query: 600 DHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
D L + +K+ ++DEAD++L+M F EVD I + +P
Sbjct: 135 D-LFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALP 175
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 125 bits (301), Expect = 1e-27
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F +L + L + L +++P+ IQ +AIP+ L G D++ A+TG+GKT +FALPI++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 390 ALLENP----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L +NP + AL+L PTRELA Q+++ G +G++ + GG+ + Q L
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
+ I++ATPGRL+D L K +L L+YLV+DEADR+L++ F + I+
Sbjct: 125 RGTDILVATPGRLLDLLRQ-KAISLEKLEYLVLDEADRMLDLGFIDPIQKIM 175
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 125 bits (301), Expect = 1e-27
Identities = 71/174 (40%), Positives = 100/174 (57%)
Frame = +3
Query: 204 KITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
K F LG+ + + + +P+ +Q +AIP L +D++ A+TG+GKT AF LPI
Sbjct: 2 KNKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPI 61
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
L+ + ALI+TPTRELA QI+ + + L G+ GG D+ Q L
Sbjct: 62 LERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGS 121
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
HIII TPGRL+DHL K NL L LV+DEAD++L+M F +V+ I+ IP
Sbjct: 122 IHIIIGTPGRLLDHLRR-KTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIP 174
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 125 bits (301), Expect = 1e-27
Identities = 68/158 (43%), Positives = 98/158 (62%), Gaps = 8/158 (5%)
Frame = +3
Query: 264 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY--------F 419
K+ KP+ IQ+ AIP+A+ G+D++ A+TGSGKT AF PI+ +L N
Sbjct: 139 KYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPT 198
Query: 420 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 599
ALIL+PTREL+ QI E+ + G+K V GG + Q L + I++ATPGRLV
Sbjct: 199 ALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLV 258
Query: 600 DHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
D +E + +LR +KYL +DEADR+L+M FE ++ I+
Sbjct: 259 DMIERAR-VSLRMIKYLALDEADRMLDMGFEPQIRKIV 295
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 125 bits (301), Expect = 1e-27
Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Frame = +3
Query: 267 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF--ALILTPT 440
+ KP IQ IP A +G DIIG A+TGSGKT AF +PIL+ L N + AL++ PT
Sbjct: 142 FSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPT 201
Query: 441 RELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL-ENT 617
RELA QI + FE + S ++ I GG+ + Q +L+K PH+++ATPGRL + EN
Sbjct: 202 RELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENN 261
Query: 618 KGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
N + +K LV+DEADR+L E+ +L ++
Sbjct: 262 LTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEIL 296
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 125 bits (301), Expect = 1e-27
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Frame = +3
Query: 177 NVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSG 356
NVNE T F D + + +E +++ ++IQK+ I +AL GKD++G A+TGSG
Sbjct: 64 NVNEITR-----FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSG 118
Query: 357 KTGAFALPILQALLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 524
KT AF +P+L+AL + LI++PTRELA+Q E +G + +I+GG
Sbjct: 119 KTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGG 178
Query: 525 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 704
D+ +A ++ +I++ TPGRL+ H++ T F+ L+ LV+DEADRIL+M F ++
Sbjct: 179 KDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMN 237
Query: 705 XILRVIP 725
++ +P
Sbjct: 238 AVIENLP 244
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 124 bits (300), Expect = 2e-27
Identities = 70/178 (39%), Positives = 106/178 (59%), Gaps = 6/178 (3%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
TF +LG+ L + +L + P+ IQ++AIP L G+D++ A+TG+GKT A+ LP++Q
Sbjct: 4 TFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQ 63
Query: 390 ALLEN------PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 551
L P+ ALIL PTRELA Q+ + + + + GG + Q
Sbjct: 64 MLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQ 123
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L+K I+IATPGRL+DHL TK +L L+ LV+DEADR+L+M F ++ I++ +P
Sbjct: 124 LAKGVDILIATPGRLLDHL-FTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMP 180
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 124 bits (300), Expect = 2e-27
Identities = 69/159 (43%), Positives = 98/159 (61%), Gaps = 6/159 (3%)
Frame = +3
Query: 267 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE----NPQRYFALILT 434
++ P+ IQ +AIP LLG+D++G A+TGSGKT AFALP+LQ L P+ LIL
Sbjct: 25 YRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILV 84
Query: 435 PTRELAFQISEQFEALGASI--GVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL 608
PTRELA Q+ E + VK AV+ GG+ + Q + L I++ATPGRL+D L
Sbjct: 85 PTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVATPGRLLDLL 144
Query: 609 ENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
E+ + + LV+DEADR+L++ F E+ IL ++P
Sbjct: 145 EH-NALKISEVSTLVLDEADRLLDLGFGEELGRILELLP 182
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 124 bits (300), Expect = 2e-27
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 4/154 (2%)
Frame = +3
Query: 276 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTR 443
P+ IQK+ IPVAL G+D++G A+TGSGKT AF +PI++ L AL+++PTR
Sbjct: 73 PTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTR 132
Query: 444 ELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKG 623
ELA+Q E +G + +I+GG D+ + + K +I++ TPGRL+ H++ T
Sbjct: 133 ELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMKT-NIVVCTPGRLLQHMDETPN 191
Query: 624 FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
F+ L+ LV+DEADRIL+M F ++ I+ +P
Sbjct: 192 FDCTSLQILVLDEADRILDMGFAPTLNAIIENLP 225
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 124 bits (300), Expect = 2e-27
Identities = 67/171 (39%), Positives = 105/171 (61%), Gaps = 8/171 (4%)
Frame = +3
Query: 237 VLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ-- 410
++ + + +K+P+ IQ+ AIP+AL +D+IG+AETGSGKT +F +P++ + E P+
Sbjct: 173 IVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLD 232
Query: 411 ------RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
+ LIL PTRELA QI ++ A +G K +VGG QAL + + +
Sbjct: 233 ERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAEL 292
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+ATPGRL+D ++ + L Y+VMDEADR+++M FE +V +L +P
Sbjct: 293 IVATPGRLLDVIDR-RLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLP 342
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 124 bits (300), Expect = 2e-27
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Frame = +3
Query: 150 SXVEQTPTENVNEXTEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 323
S VE E V + K + F+ +G+ + + + +K P+ IQ++ IPV L GK
Sbjct: 75 SDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGK 134
Query: 324 DIIGLAETGSGKTGAFALPILQALLENPQRYFA--LILTPTRELAFQISEQFEALGASIG 497
D++ +A TGSGKT F LP+ + L + + A LIL+PTRELA Q + + LG G
Sbjct: 135 DVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTG 194
Query: 498 VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 677
+K A+I+GG M Q L + P IIIATPGRLV H+ L+ ++Y+V DEADR+
Sbjct: 195 LKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEYVVFDEADRLF 253
Query: 678 NMDFEVEVDXILRVIP 725
M F ++ I+ +P
Sbjct: 254 EMGFAEQLQEIIARLP 269
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 124 bits (299), Expect = 2e-27
Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 5/203 (2%)
Frame = +3
Query: 132 AATNQASXVEQTPTENVNEXTEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIP 305
A+++ S VE E V + K + F+ +G+ + + +K P+ IQ++ IP
Sbjct: 10 ASSDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIP 69
Query: 306 VALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF---ALILTPTRELAFQISEQFE 476
V L GKD++ +A TGSGKT AF +P+ + L + PQ ALIL+PTRELA Q + +
Sbjct: 70 VILDGKDVVAMARTGSGKTAAFLIPMFERL-KAPQAQTGARALILSPTRELALQTMKFTK 128
Query: 477 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVM 656
LG +K A+I+GG M Q L + P III TPGRL+ H+ L+ ++Y+V
Sbjct: 129 ELGKFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLM-HVIKEMNLKLQNVEYVVF 187
Query: 657 DEADRILNMDFEVEVDXILRVIP 725
DEADR+ M F ++ I+R P
Sbjct: 188 DEADRLFEMGFAEQLQEIIRRFP 210
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 124 bits (299), Expect = 2e-27
Identities = 76/192 (39%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Frame = +3
Query: 159 EQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGL 338
E T +++ D + F LGV D + A + P +IQ AIP A+ G+D++G
Sbjct: 213 EATELTDLDVTGIDHEGGFSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGR 272
Query: 339 AETGSGKTGAFALPILQALLENPQ---RYFALILTPTRELAFQISEQFEALGASIGVKCA 509
A TGSGKT AF +P+L L P+ R ALIL+PTRELA QI++ +L +S+G+
Sbjct: 273 ASTGSGKTLAFGVPLLSRLSATPREDNRPRALILSPTRELAMQIADALSSLASSMGLSTI 332
Query: 510 VIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDF 689
+I GGM Q + +++ATPGRLVD LE T +L + V+DEAD + + F
Sbjct: 333 LIAGGMSYGPQTKAFKRGVDLVVATPGRLVDLLE-TGDADLSGVAVTVLDEADHMAELGF 391
Query: 690 EVEVDXILRVIP 725
V IL IP
Sbjct: 392 MEAVGSILDAIP 403
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 124 bits (299), Expect = 2e-27
Identities = 60/145 (41%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F+ + + + +AC + P+ IQ+ IPVAL GKDI A TG+GKT AF LPIL
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
Query: 387 QALLENPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
+ ++ P+ L+L PTRELA Q+ + F L I ++ + GG+D+ AQ L
Sbjct: 208 ERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 558 KKPHIIIATPGRLVDHLENTKGFNL 632
P +++ATPGRL+DHL N+ FNL
Sbjct: 268 SGPDVVVATPGRLIDHLHNSPSFNL 292
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 124 bits (299), Expect = 2e-27
Identities = 79/218 (36%), Positives = 119/218 (54%), Gaps = 9/218 (4%)
Frame = +3
Query: 87 NAHFSXMPAAKXSXGAATNQASXVEQTPTENVNEXTEDD-----KIT--FKDLGVVDVLC 245
NA + K + + E P + NE E+ K T F+ + + L
Sbjct: 183 NADADNKKSKKSNKKEEIESSEKFESFPMDENNEQEEETTSKKKKKTGGFQSMDLTKNLL 242
Query: 246 EACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR--YF 419
+A + + P+ IQ+++IP+ L G DI+G+A TGSGKTGAF +P++Q L ++
Sbjct: 243 KAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVR 302
Query: 420 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 599
A+IL+PTRELA Q + + ++ +IVGG M Q L++ P IIIATPGRL+
Sbjct: 303 AVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLM 362
Query: 600 DHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
HL T G +L ++Y+V DEADR+ M F ++ IL
Sbjct: 363 HHLLET-GMSLSKVQYIVFDEADRLFEMGFNEQLTEIL 399
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 124 bits (299), Expect = 2e-27
Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 15/203 (7%)
Frame = +3
Query: 150 SXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 329
S E P E + + +F D+ + +++ + ++ KP+ +QK AIP+ L G+D+
Sbjct: 248 SKYEDIPVEATGQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDL 307
Query: 330 IGLAETGSGKTGAFALPILQALLE-----NP----------QRYFALILTPTRELAFQIS 464
+ A+TGSGKT AF +PIL +LE NP Q L+L PTRELA QI
Sbjct: 308 MSCAQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELATQIY 367
Query: 465 EQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLK 644
E+ + ++ AV+ GG + Q L + H+I+ATPGRL D + N L L+
Sbjct: 368 EEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRL-DDIINRGKIGLENLR 426
Query: 645 YLVMDEADRILNMDFEVEVDXIL 713
+LV+DEADR+L+M FE ++ I+
Sbjct: 427 FLVLDEADRMLDMGFEPQIRHII 449
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 124 bits (299), Expect = 2e-27
Identities = 63/155 (40%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +3
Query: 267 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ--RYFALILTPT 440
++KP+ IQKE IPV L D++ +++TGSGKT +F LPI+Q L E+ LI+TP+
Sbjct: 20 YRKPTPIQKEVIPVVLADHDVVAMSKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPS 79
Query: 441 RELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTK 620
RELA Q F+ + +KCA I+GG + Q L+K P +IIATPGRL+ + T+
Sbjct: 80 RELALQTGHYFQKYASQTNLKCAQIIGGEALPPQFESLTKNPDVIIATPGRLLQIIAETQ 139
Query: 621 GFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++L ++ +V+DEAD + E ++ IL+++P
Sbjct: 140 -YSLSRVQIIVIDEADLLFEQGLEPQMTAILKLLP 173
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 124 bits (299), Expect = 2e-27
Identities = 65/176 (36%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Frame = +3
Query: 201 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 380
+K+ FKDL + + +A ++ +++ S IQ AIP L KD+ G A+TG+GKT AF +P
Sbjct: 2 EKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIP 61
Query: 381 ILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLS 557
+L+ + A+IL PTRELA Q++E+ L + + + GG + Q L
Sbjct: 62 LLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQ 121
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
K III TPGR++DH++ +L +K +++DEAD +L+M F +++ IL IP
Sbjct: 122 KGVQIIIGTPGRVMDHIDRGT-LSLNNIKTVILDEADEMLDMGFREDIEYILEDIP 176
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 124 bits (299), Expect = 2e-27
Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Frame = +3
Query: 225 GVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN 404
G+ + + ++L ++KP IQ +A+P+ + G+D IG+A+TGSGKT F LP+L+ + +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594
Query: 405 P-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
P L++ PTREL QI +G++C + GG + Q L +
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654
Query: 570 IIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
I++ TPGR++D L + G NLR + +LVMDEADR+ +M FE ++ I++ I
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI 707
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 124 bits (299), Expect = 2e-27
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ +G+ + + ++ P+ IQ++A+P+ L G DI +A TGSGKT AF +P++Q
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 393 LLENPQR--YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
L + ALIL+PTR+LA Q + + LG +K ++IVGG M +Q L++ P
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP 170
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
IIIATPGRLV HL + NLR ++Y+V DEAD + ++ ++ IL
Sbjct: 171 DIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDIL 219
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 124 bits (298), Expect = 3e-27
Identities = 77/203 (37%), Positives = 116/203 (57%), Gaps = 5/203 (2%)
Frame = +3
Query: 132 AATNQASXVEQTPTENVN-EXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPV 308
AA+ VE P V + T + F+DL + + L + +EL + ++IQ + IP
Sbjct: 120 AASGANHNVEGNPPSKVETKETFYSQTKFEDLDICEALKKGLKELNFVTLTEIQAKCIPH 179
Query: 309 ALLGKDIIGLAETGSGKTGAFALPILQALLEN---PQRYFA-LILTPTRELAFQISEQFE 476
L GKDI+G A+TGSGKT AF +P + L P+ LI++PTREL QI + +
Sbjct: 180 FLNGKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQVCK 239
Query: 477 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVM 656
L I +I+GGM + +I+IATPGRL+DH++NTK F + L L++
Sbjct: 240 DLCKYIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFIYKNLISLII 299
Query: 657 DEADRILNMDFEVEVDXILRVIP 725
DEADR+L + FE E++ I++ +P
Sbjct: 300 DEADRLLQIGFEEEINLIVKRLP 322
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 124 bits (298), Expect = 3e-27
Identities = 65/171 (38%), Positives = 105/171 (61%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F++LG+ + +A ++ ++K IQ+ AIPV L G+D++G A TG+GKTGA+++ +LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 572
+ E LI+ PTRELA QI+E+ + V+ I GG M Q L + I
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 573 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
++ATPGRL+DH++ ++ + +LV+DEAD +L+M F ++ IL + P
Sbjct: 123 LVATPGRLIDHIKR-GSISIDRVTHLVLDEADTMLDMGFIDDIQFILDLTP 172
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 124 bits (298), Expect = 3e-27
Identities = 63/173 (36%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Frame = +3
Query: 225 GVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN 404
G+ + + ++L ++KP IQ +A+P+ + G+D IG+A+TGSGKT F LP+L+ + +
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 461
Query: 405 P-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 569
P L++ PTREL QI ++G+ C + GG + Q L +
Sbjct: 462 PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTE 521
Query: 570 IIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
I++ TPGR++D L + G NLR + YLVMDEADR+ +M FE ++ I++ I
Sbjct: 522 IVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI 574
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 124 bits (298), Expect = 3e-27
Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 5/172 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 386
+F G + L + ++ +P+ IQ + +PVAL G+D+IG+A+TGSGKT AF P+L
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 387 ----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
Q LE A+I+ PTREL QI + + G + ++ + GG M QA L
Sbjct: 314 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL 373
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXI 710
+ I++ TPGRL+DH++ K NL+ + YLV DEADR+ +M FE +V I
Sbjct: 374 QEGAEIVVCTPGRLIDHVKK-KATNLQRVSYLVFDEADRMFDMGFEYQVRSI 424
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 124 bits (298), Expect = 3e-27
Identities = 65/173 (37%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ +G+ L +A + P+ IQ++ IPV + +D++G+A TGSGKT AF +P+++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 393 LLENPQRYFA--LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
L + ++ A LIL+P+RELA Q + + LG +K ++VGG + Q M++ P
Sbjct: 153 LKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNP 212
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I+IATPGR + HL+ +L +KY+V DEADR+ M F ++ IL +P
Sbjct: 213 DIVIATPGRFL-HLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLP 264
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 123 bits (297), Expect = 4e-27
Identities = 64/146 (43%), Positives = 93/146 (63%)
Frame = +3
Query: 273 KPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELA 452
+PS IQ IP L GKD+ LA TGSGKT A+ LP+L+ L +P++ AL+L PTRELA
Sbjct: 44 EPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLKTSPEQQ-ALVLVPTRELA 102
Query: 453 FQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNL 632
Q+SE +G ++G+ + GG+D Q L++ P+I++AT GRL D ++ G L
Sbjct: 103 MQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAENPNILVATTGRLFDLTQS--GLRL 160
Query: 633 RPLKYLVMDEADRILNMDFEVEVDXI 710
+ LV+DEADR+L+M F +V +
Sbjct: 161 NRVTTLVLDEADRLLDMGFWPQVQAL 186
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 123 bits (297), Expect = 4e-27
Identities = 67/171 (39%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F + + L +A ELK+ +P+ +Q AIP+AL G+D+ A+TGSGKT AF LP+L
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 393 LLE---NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK 563
L++ ALIL PTRELA Q +Q + +K ++ GG D QA ML K
Sbjct: 244 LVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRKV 303
Query: 564 PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILR 716
P ++I TPGRL++ L N +L ++ +++DEADR+L+M F +++ + +
Sbjct: 304 PDVLIGTPGRLLEQL-NAGNLDLSHVQVMILDEADRMLDMGFAEDMERLCK 353
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 123 bits (297), Expect = 4e-27
Identities = 70/203 (34%), Positives = 115/203 (56%), Gaps = 4/203 (1%)
Frame = +3
Query: 129 GAATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPV 308
G VEQ E + + + + F+D + E ++ + KP++IQ++ I
Sbjct: 51 GQEETMLDEVEQKYQEMLKKSSRTF-LRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAY 109
Query: 309 ALLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYF-ALILTPTRELAFQISEQFE 476
+L G D++G A+TGSGKT A +P+L+AL +P ALI++PTRELA Q
Sbjct: 110 SLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTIN 169
Query: 477 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVM 656
A+GA G C +++GG D+ + +S +II+ TPGRL+ H++ + L+ LV+
Sbjct: 170 AVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRLLQHMDENAQMSCDSLQVLVL 228
Query: 657 DEADRILNMDFEVEVDXILRVIP 725
DEADR+L+M F +++ I+ +P
Sbjct: 229 DEADRMLDMGFSKQLNSIINNLP 251
>UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_47_37459_39102 - Giardia lamblia
ATCC 50803
Length = 547
Score = 123 bits (297), Expect = 4e-27
Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Frame = +3
Query: 132 AATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 311
+A N E TEN + F + + L EA + + K ++IQ+ +IPV
Sbjct: 4 SAPNAPESAEGGDTENAKYQEIMTETPFSETSLSPFLLEAVDAMGHKNMTRIQEASIPVI 63
Query: 312 LLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTRELAFQISEQFEA 479
L G+++ A TGSGK+ AF LP + + + + ++LTPTRELA Q+
Sbjct: 64 LSGRNMTAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGVIVLTPTRELALQLYNVATQ 123
Query: 480 LGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMD 659
L ++ + + +GG +A L K ++IATPGRL DHL NT GF L L++D
Sbjct: 124 LISATNITVGLAIGGTSRQKEANHLCKGASVVIATPGRLCDHLNNTPGFKTDKLFMLILD 183
Query: 660 EADRILNMDFEVEVDXILRVIP 725
EAD +L F+ E++ ILR++P
Sbjct: 184 EADMLLEYGFQQELEAILRMLP 205
>UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;
n=3; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 13 - Arabidopsis thaliana (Mouse-ear cress)
Length = 832
Score = 123 bits (297), Expect = 4e-27
Identities = 89/227 (39%), Positives = 122/227 (53%), Gaps = 29/227 (12%)
Frame = +3
Query: 132 AATNQ-ASXVEQTPTENVNEXTEDDKI-----TFKDLGVVDVLCEACEELKWKKPSKIQK 293
AA NQ AS V + V E E+++I + + + +L ++ L +K+P+KIQK
Sbjct: 159 AAKNQDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQK 218
Query: 294 EAIPVALL-GKDIIGLAETGSGKTGAFALPILQALL--------------ENPQRYFA-- 422
VA GKD+IG AETGSGKT AF LPILQ LL E Q+Y A
Sbjct: 219 ACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADG 278
Query: 423 ----LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPG 590
LI+TPTRELA Q++E E ++ VK IVGGM Q L +KP I++ATPG
Sbjct: 279 YLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPG 338
Query: 591 RLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
RL + + + L L + V+DEADR++ E+ IL ++P
Sbjct: 339 RLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLP 385
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 123 bits (297), Expect = 4e-27
Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Frame = +3
Query: 225 GVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN 404
G+ L E +++ +K PS IQ+ AIP+AL +D+IG+A TGSGKT AF LP+L + E
Sbjct: 383 GLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAEL 442
Query: 405 PQ----------RYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
P+ +A+IL PTRELA QI + +G IVGG + Q+ L
Sbjct: 443 PRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSL 502
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
IIIATPGRLVD +E + L Y++MDEADR++++ FE V+ IL +P
Sbjct: 503 RNGAEIIIATPGRLVDCIER-RILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALP 558
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 123 bits (297), Expect = 4e-27
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Frame = +3
Query: 177 NVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSG 356
NVNE T F D + + +E +++ ++IQK+ I +AL GKD++G A+TGSG
Sbjct: 64 NVNEITR-----FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSG 118
Query: 357 KTGAFALPILQALLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 524
KT AF +P+L+AL + LI++PTRELA+Q E +G + +I+GG
Sbjct: 119 KTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGG 178
Query: 525 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVD 704
D+ +A ++ +I++ TPGRL+ H++ T F+ L+ LV+DEADRIL+M F ++
Sbjct: 179 KDLKHEAERIN-NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMN 237
Query: 705 XILRVIP 725
I+ +P
Sbjct: 238 AIIENLP 244
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 123 bits (297), Expect = 4e-27
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ +G+ L A + P+ IQ++ IP+ L +D++G+A TGSGKT AF +P+++
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 393 LLENPQRY--FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
L + R A+I++P+RELA Q + + LG +K ++VGG + Q +++ P
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANP 207
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
IIIATPGR + HL+ NL ++Y+V DEADR+ M F ++ IL +P
Sbjct: 208 DIIIATPGRFL-HLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALP 259
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 123 bits (296), Expect = 5e-27
Identities = 70/166 (42%), Positives = 102/166 (61%), Gaps = 5/166 (3%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F G + +A EE ++K + IQ++AIPVA G DI A+TG+GKT AF+LP++
Sbjct: 1 MSFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLI 60
Query: 387 QALLENPQRYF-----ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALM 551
Q LLE+ + ALI PTRELA QI++ +A + A I GG M +Q M
Sbjct: 61 QQLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERM 120
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDF 689
L I++ATPGRL +H+E + ++ +++LV DEADRIL+M F
Sbjct: 121 LENGVDILVATPGRLEEHIE-SGNVSVANIEFLVFDEADRILDMGF 165
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 123 bits (296), Expect = 5e-27
Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 1/172 (0%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F L + L +EL ++ + IQ+E+IP+ L GKDIIG A+TGSGKT AF+LPIL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 393 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKKPH 569
+ + ALIL PTRELA Q+ + LG + G+K + GG QA L
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 570 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ TPGRL D + + +L +K +V+DEAD++L+M F E+ ++R +P
Sbjct: 169 IVVGTPGRLADFVGRNR-IDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLP 219
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 123 bits (296), Expect = 5e-27
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
FK +++ + + +K+P+ IQKE IP + G D++G+A+TG+GKT AF+LPI+
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 393 LLEN-----PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
N + +LILTPTRELA QI + + +G+K V+ GG+ AQ +
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ATPGRL+D +E T N + L+ V+DEAD +L+M F +V I+ +P
Sbjct: 124 LGLDILVATPGRLLDLIE-TGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLP 178
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 123 bits (296), Expect = 5e-27
Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Frame = +3
Query: 234 DVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR 413
D L +L W+ +++Q++ +P+A G D+IG A TGSGKT AF LPIL+ + +
Sbjct: 14 DALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILERC-QPSGK 72
Query: 414 YFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 593
AL+L PTRELA Q++++FE L + G+ + GG D+ QA L+K II+ TPGR
Sbjct: 73 LQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDIIVGTPGR 132
Query: 594 LVDHLENTKG-FNLRPLKYLVMDEADRILNMDF 689
++D N +G +L K L +DEADR+L+M F
Sbjct: 133 VMD--MNERGHIDLNSPKMLCLDEADRMLDMGF 163
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 123 bits (296), Expect = 5e-27
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 8/186 (4%)
Frame = +3
Query: 192 TEDDKIT--FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 365
T ++K T F D + L EA E++ + K + IQ + +P+ L G D++G+A+TG+GKT
Sbjct: 2 TNENKNTAHFTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKTA 61
Query: 366 AFALPILQALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 530
AF L ++ L+ NP + +A++L PTRELA QI ++ + LGA G+ I GG
Sbjct: 62 AFLLSLMHYLMTNPVHPKAKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYGGTS 121
Query: 531 MVAQ-ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDX 707
+ Q L + +II TPGR++D L K F L+ ++ V+DEADR+ ++ F +V
Sbjct: 122 IEHQKKLFQACNVDVIIGTPGRIID-LFKQKVFRLKNIEVCVLDEADRMFDLGFIDDVRY 180
Query: 708 ILRVIP 725
+LR +P
Sbjct: 181 LLRQMP 186
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 123 bits (296), Expect = 5e-27
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALL-GKDIIGLAETGSGKTGAFALPI 383
+TF LG+ L +A ++ ++ PSKIQ+EAIP L +D++ LA+TG+GKT AF P+
Sbjct: 1 MTFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPL 60
Query: 384 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 560
LQ + + + LI+ PTREL QI+ + + I GV+ + GG ++ QA +S+
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISR 120
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
I++ATPGR+ D + + ++ L Y V+DEAD +LNM F ++ IL P
Sbjct: 121 GAQIVVATPGRMQDMMRR-RMVDITKLSYCVLDEADEMLNMGFYEDITNILADTP 174
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 123 bits (296), Expect = 5e-27
Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACE-ELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPI 383
I + LG+ + E L + PS IQ +AIP + G+DIIG+A+TGSGKT +F LP+
Sbjct: 316 IRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPL 375
Query: 384 LQALLENP-----QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
L+ + + P LI+TPTRELA QI ++ + + GG + +Q
Sbjct: 376 LRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIA 435
Query: 549 MLSKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXIL-RV 719
L K II+ TPGR++D L G NL+ + YLV+DEADR+ +M FE +V + RV
Sbjct: 436 ELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRV 495
Query: 720 IP 725
P
Sbjct: 496 RP 497
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 123 bits (296), Expect = 5e-27
Identities = 64/153 (41%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Frame = +3
Query: 264 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR--YFALILTP 437
K+ KP+ IQ A P L GKD++G+AETGSGKT AF +P + L+ + ++ L+++P
Sbjct: 131 KFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISP 190
Query: 438 TRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENT 617
TRELA QI + L +G++C + GG+ Q + L KK +++ATPGRL+D L+
Sbjct: 191 TRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQL-KKSQVVVATPGRLLDLLQE- 248
Query: 618 KGFNLRPLKYLVMDEADRILNMDFEVEVDXILR 716
+L + YLV+DEADR+L FE ++ I+R
Sbjct: 249 GSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIR 281
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 123 bits (296), Expect = 5e-27
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL- 386
TF + G + + + + P+ IQ + P+AL G+D++G+AETGSGKT + LP +
Sbjct: 135 TFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIV 194
Query: 387 ----QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
Q LL L+L PTRELA QI E+ + G S ++ + GG+ Q L
Sbjct: 195 HINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDL 254
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXIL 713
S+ + IATPGRL+D LE K NLR + YLV+DEADR+L+M FE ++ I+
Sbjct: 255 SRGVEVCIATPGRLIDMLEAGK-TNLRRVTYLVLDEADRMLDMGFEPQIRKII 306
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 122 bits (295), Expect = 7e-27
Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 4/176 (2%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
+F DL + + +E + KP+ IQ+E I + L GKDI+G A+TGSGKT AF +PIL+
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 390 ALL----ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 557
L AL++TPTRELA+QI E+ +G +I+GG D+ + +
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNRMD 171
Query: 558 KKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+ +I+I TPGR++ H++ F+ ++ LV+DEADR L+M FE ++ I+ +P
Sbjct: 172 -QCNIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLP 226
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 122 bits (295), Expect = 7e-27
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
Frame = +3
Query: 201 DKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALP 380
+ I F DLG+ + L +A +++ +++PS+IQ E+IPVAL G DIIG A+TG+GKT AF
Sbjct: 2 NNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCA 61
Query: 381 IL-QALLENPQRY-FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
I+ A ++ ALIL PTRELA Q++E+ LG + I GG + Q L
Sbjct: 62 IINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRAL 121
Query: 555 SKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILR 716
I++ TPGR++D L K L + +LV+DEAD +LNM F +++ I++
Sbjct: 122 KNGVDIVVGTPGRVLD-LIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVK 174
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 122 bits (295), Expect = 7e-27
Identities = 63/173 (36%), Positives = 106/173 (61%), Gaps = 2/173 (1%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F+ +G+ L +A + +K P+ IQ++A+P+ L G D++G+A TGSGKT AF +P+++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 393 LLENPQRYFA--LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
L + + A +I++P+RELA Q + + G ++ ++VGG + Q ++ P
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNP 199
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
IIIATPGR + HL+ G +L ++Y+V DEADR+ M F ++ IL +P
Sbjct: 200 DIIIATPGRFL-HLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALP 251
>UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 624
Score = 122 bits (294), Expect = 9e-27
Identities = 68/151 (45%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Frame = +3
Query: 285 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF----ALILTPTRELA 452
IQ+ AIP AL G+DIIG A TGSGKT AF +P+++ + + A+IL+PTRELA
Sbjct: 115 IQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFMYRSRWTELDGLCAIILSPTRELA 174
Query: 453 FQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNL 632
QI + F ++ A A+I GG D +A ++ + +++I TPGRL+ HL+NT FN
Sbjct: 175 QQIFDVFASI-AGERFTAALITGGKDTKEEAKVI-RLMNVLICTPGRLLYHLDNTPHFNT 232
Query: 633 RPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
PL+ L++DEADRIL+M F+ ++ IL +P
Sbjct: 233 TPLRMLILDEADRILDMGFKKDLTAILEHLP 263
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 122 bits (294), Expect = 9e-27
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 1/178 (0%)
Frame = +3
Query: 195 EDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFA 374
+D I F DL + + A E+ + P+ IQ AIPV L G+D +G A+TG+GKT AF+
Sbjct: 22 QDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFS 81
Query: 375 LPILQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALM 551
LP+L L + + A+++ PTRELA Q++ + + LG +I G+K I GG ++ Q
Sbjct: 82 LPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRA 141
Query: 552 LSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L HI++ TPGR+ D + + +L ++DEAD +L M F +V I+ P
Sbjct: 142 LKSGAHIVVGTPGRVKDLITRDR-LHLDECHTFILDEADEMLKMGFVDDVTWIMEQAP 198
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 122 bits (294), Expect = 9e-27
Identities = 68/173 (39%), Positives = 99/173 (57%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
I F D+ + + + A E + P+ +Q A A+ GKD+I ++TG+GKT AF LP+L
Sbjct: 29 IGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLL 88
Query: 387 QALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKP 566
+ + + +R ALIL PTRELA Q++++ + L G+K A I GG M Q L +
Sbjct: 89 EKIPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGT 148
Query: 567 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
II+ TPGR+ DH+ N L + V+DEAD +LN F EV IL +P
Sbjct: 149 PIIVGTPGRVFDHI-NRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLP 200
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 122 bits (294), Expect = 9e-27
Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Frame = +3
Query: 198 DDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFAL 377
+D F +L + L + L +++P+ IQ+EA+P + G+D++G A TG+GKT AFAL
Sbjct: 54 EDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFAL 113
Query: 378 PILQALLEN---PQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
P+L L ++ AL+L PTRELA Q+SE G +G + + GG + Q
Sbjct: 114 PLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVR 173
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L + +++ATPGR +DH+ L L +V+DEAD +L+M F ++D IL P
Sbjct: 174 ALVQGVDVVVATPGRALDHM-GRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAP 231
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 122 bits (294), Expect = 9e-27
Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Frame = +3
Query: 213 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 392
F LG+ L +A EL + P+ IQ +AIP L GK+++ A+TG+GKT +F LP+L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 393 LLE----NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSK 560
+ P+R A+ILTPTRELA Q+ E + + + GG+D Q L +
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 561 KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
+++ATPGRL+D + + + LV+DEADR+L+M F +++ I+ +P
Sbjct: 123 GVDLLVATPGRLLD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLP 176
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 122 bits (294), Expect = 9e-27
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Frame = +3
Query: 210 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 389
T+ GV + ++ ++ KP+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+ +
Sbjct: 305 TWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFR 364
Query: 390 ALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 554
+L+ P+ A+IL PTRELA Q ++ +G+K A GG+ + Q L
Sbjct: 365 HILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
Query: 555 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFEVEVDXILRVI 722
+ I++ TPGR++D L G NLR + YLV+DEADR+ + FE ++ ++ I
Sbjct: 425 KRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNI 482
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 122 bits (294), Expect = 9e-27
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Frame = +3
Query: 207 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 386
++F LG+ + A E +++P+ IQ++AIP L G+D++ A+TG+GKT F LP+L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 387 QALL------ENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 548
Q L+ + + ALILTPTRELA QI E + ++ V+ GG+ + Q +
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
Query: 549 MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFEVEVDXILRVIP 725
L +++ATPGRL+D LE+ L ++ LV+DEADR+L+M F ++ +L +P
Sbjct: 121 KLRGGVDVLVATPGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP 178
>UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Eremothecium gossypii|Rep: ATP-dependent RNA helicase
DBP7 - Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 710
Score = 122 bits (294), Expect = 9e-27
Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 13/229 (5%)
Frame = +3
Query: 75 LPQNNAHFSXMPAAKXSXGAATNQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEAC 254
+P A+ + + S A T + E+ + + TF+ LGV L E
Sbjct: 90 VPPQPANAQVVSSLFTSTRAITTSVNDHERASNDVAPSNAPLLQDTFEALGVRGTLLEHL 149
Query: 255 E-ELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQALLENPQRY---- 416
++K +KP+KIQK AIP L GK D+ A+TGSGKT AF LP+LQ LL QR
Sbjct: 150 TGKMKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTLLSLEQRIDRHS 209
Query: 417 --FALILTPTRELAFQISEQFEALGASIG--VKCAVIVGGMDMVAQALMLSKKPHIIIAT 584
FA+I+TPTRELA QI L V C ++VGG ++ L K + I+ T
Sbjct: 210 GCFAMIVTPTRELAAQIYGVISTLAQCCHYLVPC-LLVGGERKKSEKARLRKGANFIVGT 268
Query: 585 PGRLVDHLENTKGFNLR---PLKYLVMDEADRILNMDFEVEVDXILRVI 722
PGR++DHL+NTK + L+YL++DE D+++ + FE + IL ++
Sbjct: 269 PGRMLDHLQNTKVAREQLPHSLRYLILDEGDKLMELGFEETLKSILEIV 317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,472,634
Number of Sequences: 1657284
Number of extensions: 14984680
Number of successful extensions: 45935
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 41502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43946
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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