Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N15
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   105   1e-24
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.3  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    23   7.3  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   9.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  105 bits (253), Expect = 1e-24
 Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
 Frame = +3

Query: 186 EXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 365
           E   D   +F+  G+ + +     +  + KP+ IQ+ AIP+ L G+D++  A+TGSGKT 
Sbjct: 167 ENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTA 226

Query: 366 AFALPILQALLE-------NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGG 524
           AF LP++  LL+         +  + +I+ PTRELA QI ++         +K  V  GG
Sbjct: 227 AFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGG 286

Query: 525 MDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF-NLRPLKYLVMDEADRILNMDFEVEV 701
             +  Q  ++    H+++ATPGRL+D ++  +G+     + ++V+DEADR+L+M F   +
Sbjct: 287 TAVQHQLQLMRGGCHVLVATPGRLLDFID--RGYVTFENVNFVVLDEADRMLDMGFLPSI 344

Query: 702 DXIL 713
           + ++
Sbjct: 345 EKVM 348


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 711 EXCPLPLRNPC*EFYPLHPLLNILE 637
           E CP+ L++     +P HP +N  E
Sbjct: 363 EQCPVKLKSIIETLFPTHPTINTPE 387


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 559 LDSISACATMSIPPTITAHFTPMLAPSASN 470
           LDS +A   + I    +AHF+ M  P  S+
Sbjct: 418 LDSRTASTPVEICELFSAHFSQMFEPPVSD 447


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 20/70 (28%), Positives = 26/70 (37%)
 Frame = +3

Query: 141 NQASXVEQTPTENVNEXTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG 320
           NQ         EN+   T  D +    L +  V  E  +E+K KK   +  E IP  L  
Sbjct: 65  NQVGLAGADDWENLMIDTVVDTVNDFRLKIAVVSYEPDDEIKEKKLVTLNNEVIPFYLEK 124

Query: 321 KDIIGLAETG 350
            D I     G
Sbjct: 125 LDDIARDNNG 134


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 173 GWSLFHXTSLVGCGSXAXLGC 111
           GWS  H   + G  + A +GC
Sbjct: 36  GWSAIHKMQVRGAPAIAIVGC 56


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +1

Query: 73   VFPKTMLISXXCLQPRXAXEPQPTRLVXWNKLQPKMSTKXLKMIK*HLRIWEL*TYSARL 252
            VF    L+     + R A    P + +    ++ ++ T    +    + IWEL TY AR 
Sbjct: 977  VFGLAKLLDFDSDEYRAAGGKMPIKWLALECIRHRVFTSKSDVWAFGITIWELLTYGARP 1036

Query: 253  VKN 261
             +N
Sbjct: 1037 YEN 1039


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,689
Number of Sequences: 2352
Number of extensions: 14664
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)