Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N14
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 115 SCPKCPF 135
           +CPKCPF
Sbjct: 232 TCPKCPF 238


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 241 PIILHGPHQVAMKSITTSLXPASASLGFR 155
           PI+     QVA    T S+ P S   GFR
Sbjct: 175 PILSPEMSQVAASWHTPSMYPLSPGAGFR 203


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 241 PIILHGPHQVAMKSITTSLXPASASLGFR 155
           PI+     QVA    T S+ P S   GFR
Sbjct: 67  PILSPEMSQVAASWHTPSMYPLSPGAGFR 95


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 568 FKFITDVKNIFSSFIKNVY 512
           F+F+  V NIF +F+  ++
Sbjct: 66  FRFVYAVYNIFGAFVMGLF 84


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = -3

Query: 674 ISSFIYCLIIFNY---LFNYNRTNIFCIPEAA 588
           + S I+CL+ FN+    F  ++   FC   AA
Sbjct: 18  VQSEIFCLVNFNHRESYFRLSKAKSFCTFVAA 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,075
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)