Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N14
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    89   1e-19
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    24   5.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.5  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 89.0 bits (211), Expect = 1e-19
 Identities = 40/90 (44%), Positives = 55/90 (61%)
 Frame = +3

Query: 138 IKDSDXLKPRLAEAGXKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 317
           +KDS+    +L  AG +LVV+DF ATWCGPCK+I PKL+E   +                
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 318 XXASEYNINSMPTFVFVKNGKKLDEFSGAN 407
             A++YNI SMPTF+F+K  + + +FSGAN
Sbjct: 65  ELAAQYNIASMPTFLFIKRKEVVGQFSGAN 94


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 57  LVVFLLCIXNXCSXFXFQFXLPKMS 131
           LVV ++   + CS F FQ+  P +S
Sbjct: 12  LVVVVIAPRHQCSPFFFQYNRPYLS 36


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 457 LVSIYLCLRIVVLSLSTLAPE 395
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 457 LVSIYLCLRIVVLSLSTLAPE 395
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 72  LCIXNXCSXFXFQFXLPKMSIHIKDSDXLKPRLAE 176
           +C+ N       +  L +++ H++DSD   P+L+E
Sbjct: 497 ICLLNNAGKTFERLLLDRLNEHLEDSD--NPQLSE 529


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,154
Number of Sequences: 2352
Number of extensions: 9216
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)