Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_N13
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 180 3e-45
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 180 3e-45
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 180 3e-45
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 180 3e-45
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 180 3e-45
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 180 3e-45
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 3.0
DQ098802-1|AAZ13730.1| 108|Homo sapiens immunoglobulin lambda l... 30 7.0
AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 30 7.0
AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 30 7.0
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 30 7.0
AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 30 7.0
AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 30 7.0
AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 30 7.0
AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor typ... 30 7.0
AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR2... 29 9.2
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 180 bits (438), Expect = 3e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +1
Query: 109 VTVKDVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 288
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 289 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 468
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123
Query: 469 TTQGRRDLDRI 501
T QG+RDLDRI
Sbjct: 124 TPQGQRDLDRI 134
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 180 bits (438), Expect = 3e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +1
Query: 109 VTVKDVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 288
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 289 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 468
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123
Query: 469 TTQGRRDLDRI 501
T QG+RDLDRI
Sbjct: 124 TPQGQRDLDRI 134
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 180 bits (438), Expect = 3e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +1
Query: 109 VTVKDVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 288
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 289 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 468
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 135
Query: 469 TTQGRRDLDRI 501
T QG+RDLDRI
Sbjct: 136 TPQGQRDLDRI 146
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 180 bits (438), Expect = 3e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +1
Query: 109 VTVKDVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 288
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 289 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 468
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123
Query: 469 TTQGRRDLDRI 501
T QG+RDLDRI
Sbjct: 124 TPQGQRDLDRI 134
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 180 bits (438), Expect = 3e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +1
Query: 109 VTVKDVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 288
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 289 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 468
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123
Query: 469 TTQGRRDLDRI 501
T QG+RDLDRI
Sbjct: 124 TPQGQRDLDRI 134
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 180 bits (438), Expect = 3e-45
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +1
Query: 109 VTVKDVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 288
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 289 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 468
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123
Query: 469 TTQGRRDLDRI 501
T QG+RDLDRI
Sbjct: 124 TPQGQRDLDRI 134
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 241 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 411
Y P R +LR P G + T + GGR+ G S CR G R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235
>DQ098802-1|AAZ13730.1| 108|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 108
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -1
Query: 442 SQQASMPPTIAKPCVQYCLMTCRNVKV*LHYVCAHQRSW*QS-LLQQVSECKYDEGWQHN 266
S + + PP+++ Q +TC K+ YVC +Q+ QS +L + K G
Sbjct: 1 SYELTQPPSVSVSPGQTARITCSGDKLGNEYVCWYQQKSGQSPVLVIYQDSKRSSGTPER 60
Query: 265 AHRTNQGHTEPAL*SELSLQD 203
+N G+T S + +D
Sbjct: 61 FSGSNSGNTATLTISGVQAED 81
>AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor type 1
protein.
Length = 132
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT ++IR C GF +VG +++GRW
Sbjct: 93 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 123
>AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR25
protein.
Length = 116
Score = 29.5 bits (63), Expect = 9.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 366 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 458
FT +++R C GF +VG +++GRW
Sbjct: 84 FTLTEIVRFRCQPGFVMVGSHTVQCQTNGRW 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,842,568
Number of Sequences: 237096
Number of extensions: 1726244
Number of successful extensions: 3106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3106
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -