Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N09
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   6.3  
Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precurso...    23   8.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   8.3  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 634 RKHSCSIPSRPQWSHDTAYAETFKKKICY 720
           RKH+  +P+ P W      +E     +CY
Sbjct: 250 RKHNIPLPNNPPWFVIFRVSEDDMLDVCY 278


>Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precursor
           of ANTRYP7 protein.
          Length = 267

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 365 FGSVFN--ETLHFHKARLVPTVPLHSCSEIINHEEI 466
           +GS  N  E+    +A  VPTV    C E  +HE I
Sbjct: 166 WGSTHNAAESNAILRAANVPTVDQEECREAYSHEAI 201


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 359  KDFGSVFNETLHFHKARLVP 418
            ++FGS+F+  L   +ARLVP
Sbjct: 1037 ENFGSIFSTLLPGTQARLVP 1056


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,845
Number of Sequences: 2352
Number of extensions: 14367
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)