Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N09
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005069-1|AAH05069.1|  188|Homo sapiens chromosome 2 open readi...   122   2e-27
AY358605-1|AAQ88968.1|  188|Homo sapiens C2orf7 protein.              122   2e-27
AC010913-2|AAX88901.1|  188|Homo sapiens unknown protein.             122   2e-27
AL096819-3|CAI21741.1|  932|Homo sapiens ER degradation enhancer...    60   9e-09
AF288393-1|AAG60613.1|  889|Homo sapiens C1orf22 protein.              60   9e-09

>BC005069-1|AAH05069.1|  188|Homo sapiens chromosome 2 open reading
           frame 7 protein.
          Length = 188

 Score =  122 bits (293), Expect = 2e-27
 Identities = 62/163 (38%), Positives = 90/163 (55%)
 Frame = +2

Query: 302 FFEIIDPPELGYSYRIRPAKDFGSVFNETLHFHKARLVPTVPLHSCSEIINHEEIVGHIA 481
           +F+++ P ++ Y +   PAKDFG +F+    + +  LVP  P  +C E+ N   I   IA
Sbjct: 31  YFQVLSPGDIRYIFTATPAKDFGGIFHT--RYEQIHLVPAEPPEACGELSNGFFIQDQIA 88

Query: 482 LSERGECSFVFKATKAQHAGARAVIITESIDRWDDSLDHLIEMVDDKMELDVNIPAAFLL 661
           L ERG CSF+ K    Q  G RAVII+   D   D+    +EM+ D  +   +IPA FLL
Sbjct: 89  LVERGGCSFLSKTRVVQEHGGRAVIIS---DNAVDNDSFYVEMIQDSTQRTADIPALFLL 145

Query: 662 GRSGATIXXXXXXXXXXYAIVNLPVNMTHVPINKMNQPPWVAW 790
           GR G  I          +AI+++PVN+T +P  ++ QPPW  W
Sbjct: 146 GRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW 188


>AY358605-1|AAQ88968.1|  188|Homo sapiens C2orf7 protein.
          Length = 188

 Score =  122 bits (293), Expect = 2e-27
 Identities = 62/163 (38%), Positives = 90/163 (55%)
 Frame = +2

Query: 302 FFEIIDPPELGYSYRIRPAKDFGSVFNETLHFHKARLVPTVPLHSCSEIINHEEIVGHIA 481
           +F+++ P ++ Y +   PAKDFG +F+    + +  LVP  P  +C E+ N   I   IA
Sbjct: 31  YFQVLSPGDIRYIFTATPAKDFGGIFHT--RYEQIHLVPAEPPEACGELSNGFFIQDQIA 88

Query: 482 LSERGECSFVFKATKAQHAGARAVIITESIDRWDDSLDHLIEMVDDKMELDVNIPAAFLL 661
           L ERG CSF+ K    Q  G RAVII+   D   D+    +EM+ D  +   +IPA FLL
Sbjct: 89  LVERGGCSFLSKTRVVQEHGGRAVIIS---DNAVDNDSFYVEMIQDSTQRTADIPALFLL 145

Query: 662 GRSGATIXXXXXXXXXXYAIVNLPVNMTHVPINKMNQPPWVAW 790
           GR G  I          +AI+++PVN+T +P  ++ QPPW  W
Sbjct: 146 GRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW 188


>AC010913-2|AAX88901.1|  188|Homo sapiens unknown protein.
          Length = 188

 Score =  122 bits (293), Expect = 2e-27
 Identities = 62/163 (38%), Positives = 90/163 (55%)
 Frame = +2

Query: 302 FFEIIDPPELGYSYRIRPAKDFGSVFNETLHFHKARLVPTVPLHSCSEIINHEEIVGHIA 481
           +F+++ P ++ Y +   PAKDFG +F+    + +  LVP  P  +C E+ N   I   IA
Sbjct: 31  YFQVLSPGDIRYIFTATPAKDFGGIFHT--RYEQIHLVPAEPPEACGELSNGFFIQDQIA 88

Query: 482 LSERGECSFVFKATKAQHAGARAVIITESIDRWDDSLDHLIEMVDDKMELDVNIPAAFLL 661
           L ERG CSF+ K    Q  G RAVII+   D   D+    +EM+ D  +   +IPA FLL
Sbjct: 89  LVERGGCSFLSKTRVVQEHGGRAVIIS---DNAVDNDSFYVEMIQDSTQRTADIPALFLL 145

Query: 662 GRSGATIXXXXXXXXXXYAIVNLPVNMTHVPINKMNQPPWVAW 790
           GR G  I          +AI+++PVN+T +P  ++ QPPW  W
Sbjct: 146 GRDGYMIRRSLEQHGLPWAIISIPVNVTSIPTFELLQPPWTFW 188


>AL096819-3|CAI21741.1|  932|Homo sapiens ER degradation enhancer,
           mannosidase alpha-like 3 protein.
          Length = 932

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +2

Query: 425 PLHSCSEIINHEEIVGHIALSERGECSFVFKATKAQHAGARAVIITESIDRWDDSLDHLI 604
           P + CSE+ N E ++G IAL +RG+C F  KA   Q+AGA   I+ +  +        L 
Sbjct: 689 PSNGCSELTNPEAVMGKIALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLF 748

Query: 605 EMVDDKMEL-DVNIPAAFLLGRSGATI 682
           +M  D  +  D+ IP  FL  + G+ I
Sbjct: 749 QMAGDGKDTDDIKIPMLFLFSKEGSII 775


>AF288393-1|AAG60613.1|  889|Homo sapiens C1orf22 protein.
          Length = 889

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +2

Query: 425 PLHSCSEIINHEEIVGHIALSERGECSFVFKATKAQHAGARAVIITESIDRWDDSLDHLI 604
           P + CSE+ N E ++G IAL +RG+C F  KA   Q+AGA   I+ +  +        L 
Sbjct: 646 PSNGCSELTNPEAVMGKIALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLF 705

Query: 605 EMVDDKMEL-DVNIPAAFLLGRSGATI 682
           +M  D  +  D+ IP  FL  + G+ I
Sbjct: 706 QMAGDGKDTDDIKIPMLFLFSKEGSII 732


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,375,208
Number of Sequences: 237096
Number of extensions: 2060536
Number of successful extensions: 2761
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2755
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)