Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N03
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    26   0.35 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 453 SQQMYSYKMSGGFTSNGNNTT 515
           S QM SY+ +G  T +G+NT+
Sbjct: 242 SPQMQSYRPTGNITPHGSNTS 262


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 372 SWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYK 476
           SW  S++     +   +E++ T T T     Y YK
Sbjct: 12  SWLKSNSSLAGFEVNSSEQLTTPTPTDINSFYFYK 46


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 444 ATTSQQMYSYKMSGGFTSNGNNTTPS 521
           A+    M +  M GG   NGN  T S
Sbjct: 47  ASFGSSMLNSGMPGGMAMNGNGMTSS 72


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 517 GVVLFPLDVKPPDILYEYIC 458
           GVVL PLD +  +I  + IC
Sbjct: 450 GVVLNPLDARCNEIRPDAIC 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,836
Number of Sequences: 336
Number of extensions: 3434
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)