Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_N03
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0327 + 2659822-2660232,2660906-2660959 32 0.40
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366... 31 0.91
02_01_0349 + 2511112-2511576 31 1.2
11_01_0771 + 6453130-6454488 30 1.6
12_02_0304 + 17112677-17113195 30 2.1
04_04_0427 + 25137036-25137119,25137687-25137826,25139775-251398... 29 2.8
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867... 29 2.8
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 29 2.8
10_08_0338 + 16916429-16916650,16916728-16917900 29 4.9
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 29 4.9
02_05_0192 + 26602247-26602617,26602701-26603016 29 4.9
09_03_0132 + 12639828-12639972,12640171-12640250 28 6.4
08_01_0797 + 7711772-7712869 28 6.4
07_01_0091 - 692416-693906 28 6.4
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 28 6.4
02_03_0258 - 16930027-16930485,16930686-16930991 28 6.4
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549... 28 6.4
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 28 8.5
11_03_0122 - 10313934-10314069,10315889-10316319 28 8.5
08_01_1039 + 10548266-10548619,10548734-10549213,10549408-105495... 28 8.5
07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663... 28 8.5
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 28 8.5
03_06_0063 - 31391870-31392679 28 8.5
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 28 8.5
01_06_1443 - 37399670-37400380 28 8.5
>01_01_0327 + 2659822-2660232,2660906-2660959
Length = 154
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 400 SSPALLGHHEASSRAPQAPPV-APRSPILQPLPV 302
SSP LG AS+R APP PR P L PL V
Sbjct: 92 SSPRTLGRSSASARGDDAPPFHLPRRPPLPPLLV 125
>01_06_1598 +
38535077-38535368,38536381-38536463,38536575-38536643,
38537127-38537182,38537275-38537354,38537496-38537578,
38537682-38537759,38538133-38538201,38538366-38538434,
38538520-38538566,38538656-38538746,38538839-38538892
Length = 356
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 261 RPRKGQNT*RNWLTTGSGCRMGERGATGGAWGARDDASWW 380
RP +G T + G G R+G RGA GG G D +WW
Sbjct: 25 RPMEGGRTGARGASGGGG-RLGARGAAGG--GRGDLGAWW 61
>02_01_0349 + 2511112-2511576
Length = 154
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 288 RNWLTTGSGCRMGERGATG-GAWGARDDASWWPSSAGEL 401
RNW G GCR G TG GAR W GE+
Sbjct: 32 RNWRRGGDGCRSGGWQDTGETVMGARSAGRWSQRMGGEI 70
>11_01_0771 + 6453130-6454488
Length = 452
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 363 DDASWWPSSAGELQHQQ--QLNEEIGTSTATTSQQM 464
DD S WP G++QH+ ++NEE + A T +M
Sbjct: 375 DDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRM 410
>12_02_0304 + 17112677-17113195
Length = 172
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 380 PPRGIVARTPSAPRRAP----FAHPTTAACGQPVPLCILSFSRPFKI 252
PPR R P +PRRAP A PT A P P +++ S+P +
Sbjct: 30 PPRRNPPRAPPSPRRAPSPSVTAEPTPAPVIAPSPPPVVAPSQPLVV 76
>04_04_0427 +
25137036-25137119,25137687-25137826,25139775-25139846,
25141160-25141470,25141595-25141705,25143548-25143640,
25144063-25144212,25145062-25145120,25145636-25145693,
25146351-25146622
Length = 449
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 364 SRAPQAPPVAPRSPILQ-PLPVVNQFLYVFCPFRGRLRYIKL 242
SRAP PP + P+L+ LP+ QF Y CP+R RL + L
Sbjct: 398 SRAPSIPPGSKGRPLLRFCLPL--QFYYC-CPYRVRLASVYL 436
>03_06_0033 -
31186076-31186189,31186274-31186396,31186524-31186718,
31186805-31186930,31187024-31187186,31187270-31187405,
31187557-31187916,31188026-31188124,31188222-31188489
Length = 527
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 406 CCSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVVN 296
C SS L ASS P PP P + I QP+P+V+
Sbjct: 177 CSSSGGGLKESAASSTRPPFPPSIPSNKI-QPMPIVS 212
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 385 LGHHEASSRAPQAPPVAPRSPILQPLPVVN 296
L HH A++RAP PP PR L VV+
Sbjct: 14 LPHHRATTRAPPTPPRIPRRARLPGRSVVS 43
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Frame = +3
Query: 306 GSGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQ--------- 458
GSG + G GA G WG + + + S G N A TSQ
Sbjct: 310 GSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAWNNSSAGGNAPTSQAAGAGTGYG 369
Query: 459 -QMYSYKMSGGFTSNGNN 509
Q Y Y GG S GN+
Sbjct: 370 SQGYGYGGYGGDASYGNH 387
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 391 ALLGHHEASSRAPQAPPVAPRSPILQPLP 305
A HH PQAPP P QP+P
Sbjct: 2 AFFSHHHLQQPHPQAPPPPPPQQQQQPVP 30
>02_05_0192 + 26602247-26602617,26602701-26603016
Length = 228
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 255 LKRPRK---GQNT*RNWLTTGSGCRMGERGATGGAWGARDDASWW 380
L+RPR+ G R W + G C R G+W R A+WW
Sbjct: 42 LQRPRRLSAGSGCGR-WWSAGDACWRQRRRCGRGSWRRRLLAAWW 85
>09_03_0132 + 12639828-12639972,12640171-12640250
Length = 74
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 373 EASSRAPQAPPVAPRSPILQPLPVVNQFLYVFC 275
+ + RA PP+ P SP LP+ +Q Y FC
Sbjct: 30 QETCRALCLPPLCPLSPYPARLPIDDQNTYEFC 62
>08_01_0797 + 7711772-7712869
Length = 365
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 415 CCWCCSSPALLGHHEASSRAPQAPPVAPRSPILQPLP--VVNQFLYVFC 275
C W SSP L ++S P++P PRS + +VN L V C
Sbjct: 102 CNWSRSSPRLFDSSDSSRFGPRSPLFIPRSDLEMEESGYIVNDRLTVEC 150
>07_01_0091 - 692416-693906
Length = 496
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 361 RAPQAPPVAPRSPIL-QPLPV 302
RAP PP APR+P+ PLP+
Sbjct: 222 RAPPPPPPAPRAPVYHHPLPL 242
>04_04_1657 -
35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 28.3 bits (60), Expect = 6.4
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 303 TGSGCRMGERGATGGAWGARDDASWW-PSS-AGELQHQQQLNEEIGT---STATTSQQMY 467
TG G+ G G + S W P +G L+ Q GT + T+S ++Y
Sbjct: 356 TGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLY 415
Query: 468 SY-KMSGGFTSNGNNTTPSYEYRIMSNSNTREASPQQQWWYSSGGVDSQQASSPT 629
++ + G +GN T SY + S R S W+++ V+ A S T
Sbjct: 416 TFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNT 470
>02_03_0258 - 16930027-16930485,16930686-16930991
Length = 254
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 288 RNWLTTGSGCRMGERGATGGAWGAR 362
R W S C+ GE A G WG R
Sbjct: 161 RVWAPMWSSCQQGEGDAGAGGWGGR 185
>01_06_0876 -
32654209-32654238,32654357-32654672,32654833-32654901,
32655238-32655275,32655418-32655478,32655550-32655617,
32655729-32655889,32656687-32656751,32656883-32656956,
32658158-32658245,32658800-32658879,32659168-32659224,
32659332-32659404,32659524-32659762,32659846-32660025,
32660150-32660440
Length = 629
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 397 SPALLGHHEASSRAPQAPPVAPRSPILQPLPVVNQFLYVFCPFRGRLR 254
S L AS R PP A R+P+ +P ++ F FRG L+
Sbjct: 21 SSRLAPRRVASHRTVAPPPAARRAPLSEPDVGISLFASALPGFRGALK 68
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +3
Query: 306 GSGCRMGERGATGGAWGARDDASWWPSSAGELQH 407
GSG GE G GG G R A WW GE QH
Sbjct: 682 GSGMGGGEWG--GGEMG-RIMAQWWMGRRGESQH 712
>11_03_0122 - 10313934-10314069,10315889-10316319
Length = 188
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 389 ATWPPRGIVARTPSAPRRAPFAHPTTA-ACGQPVPLCIL 276
A W RG++ T + R P P A C P PL +L
Sbjct: 103 AKWAARGVIQVTVTHHRTPPLRQPGEARVCRPPPPLLVL 141
>08_01_1039 +
10548266-10548619,10548734-10549213,10549408-10549510,
10549550-10550175
Length = 520
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 571 SNNGGTHQEV*THNKHLHRRRXISQIKKAIKT 666
+NNG H+E+ N H H + ++Q+ + T
Sbjct: 257 NNNGTVHKEIWGENNHAHIIKELAQLASLVPT 288
>07_01_0821 +
6631942-6632144,6632155-6632680,6634264-6634619,
6634683-6634877,6635419-6635623
Length = 494
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 396 ELQHQQQLNEEIGTSTATTSQQMYSYKMSG 485
EL+HQ+Q+N ++ +TA + S SG
Sbjct: 446 ELRHQEQMNRKLSIATAAEEAKQLSIPCSG 475
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 376 HEASSRAPQAPPVAPRSPILQPL 308
H A A + PP +PR P++ P+
Sbjct: 71 HRAGGEAHRPPPGSPRQPVISPM 93
>03_06_0063 - 31391870-31392679
Length = 269
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -3
Query: 427 SSFNCCWC---CSSPALLGHHEASSRAPQAPPVAPRSPILQPLPV 302
+ F C C SS LG H+ S R P P +P+L P PV
Sbjct: 95 AEFKCSVCGKSFSSYQALGGHKTSHRVKL--PTPPAAPVLAPAPV 137
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -2
Query: 458 LTCSGCTSAYFFI*LLLVLQFTCATWPPRGIVARTPSA-----PRRAPFAHPTTAACGQP 294
LT +S+ FF L+LVL +C+ P G R+P+A P P P T P
Sbjct: 6 LTPLSSSSSRFFFLLVLVLVLSCSL-PANGRTHRSPAAAASPSPGPGPSPAPATPRVVPP 64
Query: 293 VP 288
P
Sbjct: 65 AP 66
>01_06_1443 - 37399670-37400380
Length = 236
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 696 DSVEYRSVVDCFDRFLDLTDXATSVKM 616
DSVEYR VDC+ R D ++ AT+V M
Sbjct: 198 DSVEYRPDVDCYIRVPDPSN-ATAVAM 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,259,679
Number of Sequences: 37544
Number of extensions: 369834
Number of successful extensions: 1579
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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