Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N03
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           36   0.002
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    26   1.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   1.8  
AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    24   4.1  
AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    23   7.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.2  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
 Frame = +3

Query: 324 GERGATGGAWGARDDASWWPSSAGE-LQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSN 500
           G+    GG  G +   S   +   +  Q QQQ  ++   S     QQ    + SG  T +
Sbjct: 387 GQSAQAGGPAGGQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQQQQQQQQQSGSATWS 446

Query: 501 GNNTTPSYEYRIM-----SNSNTREASPQQ-QWW-YSSGGVDS 608
           G+NT  +Y   I      S S+ ++AS QQ Q+W + SGG  S
Sbjct: 447 GSNTL-NYTQSIQPPAHASGSHQQQASQQQSQYWPHGSGGSSS 488


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 696 DSVEYRSVVDC-FDRFLDLTDXATSVKMLVVSLHLLMSTTIVAEVK 562
           DS E+R+ +DC F  F  + D    V  +V   +L+  + +  EV+
Sbjct: 201 DSAEFRNAMDCVFRGFRYMDDSGLKVDEVVRDFNLINKSDLEPEVR 246


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 382  GHHEASSRAPQAPPVAPRSPILQPLP 305
            G  E    +P  PP+ PRS  L P P
Sbjct: 1095 GEVEEEEVSPPVPPIPPRSRRLPPSP 1120


>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 435 TSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNTREAS 566
           TS ATTS+   +   S    S+ +NTT + E    + + T  +S
Sbjct: 77  TSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSS 120


>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 394 PALLGHHEASSRAPQAPPVAPRSP 323
           P ++G +EA  R  Q P +  R+P
Sbjct: 84  PGVIGAYEAYRRTVQGPQLMQRNP 107


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 384 SSAGELQHQQQLN-EEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYEYRIMSNSNT 554
           SS   L +   LN    G++T TT+        +GG ++N NN+  S       +SNT
Sbjct: 119 SSNAALSNSSVLNGSNSGSATTTTTTPTNPGNGNGG-SNNNNNSNSSSSCNNHVSSNT 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,579
Number of Sequences: 2352
Number of extensions: 12898
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)