Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_N01
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    25   1.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   5.3  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   6.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 296 MEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 466
           MEA R ++  +   +  L +    L K++ F +  + R    I+R+KE ++ I KPQ
Sbjct: 1   MEAERREKIVHNYLENPLWSAS-RLAKKLKFPRNTVWR---VIKRYKEILTTIRKPQ 53


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 349 SKPEGALEQGDCLPPGADQTT*G 417
           ++P G+ E+  C P G +QT  G
Sbjct: 876 AEPHGSCEECSCYPRGTEQTEKG 898


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 329 KKQKEQLANLKGHLNKEIAFHQEQIKR----HEDAIRRHKEQMSDIE 457
           K  + ++A+ KGH  +E+   +E +KR     E++ +  K+   D E
Sbjct: 772 KDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQDFE 818


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 556 YLKQYKFYILLCFVGIF 506
           Y+K    Y+++CFV +F
Sbjct: 281 YVKAIDIYLVMCFVFVF 297


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 358  EGALEQGDCLPPGADQ 405
            +G + + DCLPP  D+
Sbjct: 1813 DGIINEEDCLPPDNDK 1828


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,248
Number of Sequences: 2352
Number of extensions: 9200
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)