Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_N01
(566 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial... 78 5e-15
AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical ... 78 5e-15
U49941-7|AAB53875.1| 88|Caenorhabditis elegans Mitochondrial a... 58 3e-09
L12348-1|AAA28107.1| 88|Caenorhabditis elegans ATPase inhibito... 58 3e-09
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 0.44
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 31 0.76
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 29 3.1
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 7.1
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 27 7.1
Z68003-4|CAA91978.2| 277|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z35595-9|CAA84638.1| 367|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 7.1
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 27 7.1
Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical p... 27 9.4
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 27 9.4
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 27 9.4
AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear recep... 27 9.4
AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear recep... 27 9.4
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 9.4
>AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial
ATPase inhibitor protein.
Length = 109
Score = 77.8 bits (183), Expect = 5e-15
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = +2
Query: 287 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIE 457
FGKMEAAREDEYFYKKQK QL L+ H+ +E+ H+ Q++ H+ + RH++++S+IE
Sbjct: 44 FGKMEAAREDEYFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100
>AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical
protein B0546.1 protein.
Length = 109
Score = 77.8 bits (183), Expect = 5e-15
Identities = 31/57 (54%), Positives = 45/57 (78%)
Frame = +2
Query: 287 FGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIE 457
FGKMEAAREDEYFYKKQK QL L+ H+ +E+ H+ Q++ H+ + RH++++S+IE
Sbjct: 44 FGKMEAAREDEYFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100
>U49941-7|AAB53875.1| 88|Caenorhabditis elegans Mitochondrial
atpase inhibitorfamily protein 1 protein.
Length = 88
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +2
Query: 284 TFGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 460
+ G M A RE+EYF ++QK+QL NLK L ++ Q++I+ HE + +H++++ +IEK
Sbjct: 26 SLGMMGATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84
>L12348-1|AAA28107.1| 88|Caenorhabditis elegans ATPase inhibitor
protein.
Length = 88
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +2
Query: 284 TFGKMEAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 460
+ G M A RE+EYF ++QK+QL NLK L ++ Q++I+ HE + +H++++ +IEK
Sbjct: 26 SLGMMGATREEEYFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 329 KKQKEQLAN-LKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 466
K+ EQ+ + ++G + ++ A Q++ D I +HK+Q S +EK Q
Sbjct: 1179 KRAIEQIQHTMEGKIEEQKAKFSRQVEELHDQIEQHKKQRSQLEKQQ 1225
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 335 QKEQLANLKG--HLNKEIAFHQEQIKRHEDAIRRHKEQMSD 451
+KE L K HLN+E+ EQ+K+ + +RH E++ D
Sbjct: 225 EKEMLTGKKTIEHLNEEVLTSPEQLKQEMEERKRHIEELRD 265
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 293 KMEAAREDEYFYKKQKEQLANLKGHLNKE---IAFHQEQIKRHEDAIRRHKEQMSDIEKP 463
+MEA +E+E K ++E++ + L E + +E++K E+ ++ KE+ + K
Sbjct: 905 RMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKA 964
Query: 464 Q 466
+
Sbjct: 965 E 965
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 299 EAAREDEYFYKKQ-KEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDI 454
E RE K++ KE+ A ++ +N+ A H +Q ++ D I R K+Q + +
Sbjct: 1861 ELIRERNNLVKEEIKEEKALMERQINEMKAKHLQQTRKMADEILRLKQQSAQL 1913
>Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical
protein T27E7.6 protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 311 EDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 466
E + K++ ++L +N+ HQE+ K+H I + K +M ++ Q
Sbjct: 179 EKQKIMKERSDELEKYTREMNEMAKNHQEERKKHNAIIGQKKMEMIGSKRDQ 230
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 329 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 460
++++E+ L+ E QE++KR E+ R+ EQ+ + EK
Sbjct: 1190 REEEEEKMRLERLRKAEREREQERLKREEEEERKRLEQLREAEK 1233
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 329 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 460
++++E+ L+ E QE++KR E+ R+ EQ+ + EK
Sbjct: 1190 REEEEEKMRLERLRKAEREREQERLKREEEEERKRLEQLREAEK 1233
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 299 EAAREDEYFYKKQ-KEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDI 454
E RE K++ KE+ A ++ +N+ A H +Q ++ D I R K+Q + +
Sbjct: 1861 ELIRERNNLVKEEIKEEKALMERQINEMKAKHLQQTRKMADEILRLKQQSAQL 1913
>Z68003-4|CAA91978.2| 277|Caenorhabditis elegans Hypothetical
protein E02H4.5 protein.
Length = 277
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 432 TKNKCLTLKSPNELDIDSDSFRRPKN 509
+K+KC +LK +L++ S S + P+N
Sbjct: 71 SKSKCASLKEQTDLNVQSHSQKLPRN 96
>Z35595-9|CAA84638.1| 367|Caenorhabditis elegans Hypothetical
protein C01G6.9 protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 311 EDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ 466
E + Y + L+ LK +E+ + +HE+ IR HK + S+ K Q
Sbjct: 142 EQQAMYSENGRTLSGLK----EEVVIKMAECAQHEEEIRPHKPEDSNSPKKQ 189
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 329 KKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEK 460
++++E+ L+ E QE++KR E+ R+ EQ+ + EK
Sbjct: 1190 REEEEEKMRLERLRKAEREREQERLKREEEEERKRLEQLREAEK 1233
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 299 EAAREDEYFYKKQKEQLANLKGHLNKEIAFHQE-QIKRHEDAIRRHKEQMSDIEK 460
E E + F + +E K ++NK QE ++KR + +KE+M+++EK
Sbjct: 154 ERLHEKDAFIEACEEFYDEKKINVNKMTLMKQEMELKRIKKNFEEYKERMTEVEK 208
>Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical
protein K06B4.11 protein.
Length = 364
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 299 EAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*TGH 478
E+ E E K +E+ +K + K++ FH + I + D R +S + Q H
Sbjct: 276 ESDLEVEADRKNVQEEAVKIKSAIIKDLLFHYQSINVYADVAMRLGAVLSILPSIQRASH 335
Query: 479 R 481
R
Sbjct: 336 R 336
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 296 MEAARED-EYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIE 457
M R D E +Y+ + +++ N E + +E++KR + ++++SD+E
Sbjct: 293 MNGNRNDMESWYQLRVQEINTQSNRQNAENNYQKEEVKRLRNQTSELRQKLSDLE 347
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 296 MEAARED-EYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIE 457
M R D E +Y+ + +++ N E + +E++KR + ++++SD+E
Sbjct: 293 MNGNRNDMESWYQLRVQEINTQSNRQNAENNYQKEEVKRLRNQTSELRQKLSDLE 347
>AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear receptor
NHR-53 protein.
Length = 365
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 299 EAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*TGH 478
E+ E E K +E+ +K + K++ FH + I + D R +S + Q H
Sbjct: 277 ESDLEVEADRKNVQEEAVKIKSAIIKDLLFHYQSINVYADVAMRLGAVLSILPSIQRASH 336
Query: 479 R 481
R
Sbjct: 337 R 337
>AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear receptor
NHR-53 protein.
Length = 366
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 299 EAAREDEYFYKKQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSDIEKPQ*TGH 478
E+ E E K +E+ +K + K++ FH + I + D R +S + Q H
Sbjct: 278 ESDLEVEADRKNVQEEAVKIKSAIIKDLLFHYQSINVYADVAMRLGAVLSILPSIQRASH 337
Query: 479 R 481
R
Sbjct: 338 R 338
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -3
Query: 447 DICSL*RLIASSCRLICSWWKAISLFKCPFRFASC 343
D+C RL C C+ + +F CP SC
Sbjct: 312 DMCREPRLCTKKCHNQCTHGHVMDIFGCPIASCSC 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,156,050
Number of Sequences: 27780
Number of extensions: 209221
Number of successful extensions: 627
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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