Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M23
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    25   0.79 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.79 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.79 
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    22   5.6  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +3

Query: 561 YSYLNFSKTRQRYEIRRTFVSEKARRTERVYLPPKTHLFXCYECNW 698
           Y YL  S    RY++     +       R Y+PP +     + CNW
Sbjct: 170 YQYLR-STLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNW 214


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +3

Query: 561 YSYLNFSKTRQRYEIRRTFVSEKARRTERVYLPPKTHLFXCYECNW 698
           Y YL  S    RY++     +       R Y+PP +     + CNW
Sbjct: 330 YQYLR-STLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNW 374


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +3

Query: 561 YSYLNFSKTRQRYEIRRTFVSEKARRTERVYLPPKTHLFXCYECNW 698
           Y YL  S    RY++     +       R Y+PP +     + CNW
Sbjct: 330 YQYLR-STLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNW 374


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 343 ASKISFALYC 314
           AS ISFALYC
Sbjct: 2   ASGISFALYC 11


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,178
Number of Sequences: 336
Number of extensions: 2417
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)