Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_M22
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 165 1e-40
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 165 1e-40
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 165 1e-40
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 165 1e-40
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 165 1e-40
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 164 2e-40
BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein. 37 0.074
BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein. 37 0.074
AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304... 37 0.074
U47105-1|AAC50558.2| 373|Homo sapiens H105e3 protein. 30 6.5
BC007816-1|AAH07816.1| 373|Homo sapiens NAD(P) dependent steroi... 30 6.5
BC000245-1|AAH00245.1| 373|Homo sapiens NAD(P) dependent steroi... 30 6.5
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 165 bits (401), Expect = 1e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Frame = +2
Query: 170 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 349
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 91
Query: 350 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 529
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 92 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 151
Query: 530 RICREEGVERFIHLSYLNA 586
++ +E GVE+FIH+S+LNA
Sbjct: 152 QLSKEAGVEKFIHVSHLNA 170
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 165 bits (401), Expect = 1e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Frame = +2
Query: 170 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 349
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 350 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 529
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 530 RICREEGVERFIHLSYLNA 586
++ +E GVE+FIH+S+LNA
Sbjct: 154 QLSKEAGVEKFIHVSHLNA 172
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 165 bits (401), Expect = 1e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Frame = +2
Query: 170 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 349
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 350 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 529
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 530 RICREEGVERFIHLSYLNA 586
++ +E GVE+FIH+S+LNA
Sbjct: 154 QLSKEAGVEKFIHVSHLNA 172
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 165 bits (401), Expect = 1e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Frame = +2
Query: 170 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 349
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 350 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 529
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 530 RICREEGVERFIHLSYLNA 586
++ +E GVE+FIH+S+LNA
Sbjct: 154 QLSKEAGVEKFIHVSHLNA 172
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 165 bits (401), Expect = 1e-40
Identities = 78/139 (56%), Positives = 105/139 (75%)
Frame = +2
Query: 170 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 349
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 350 LKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 529
L+ GDLGQ+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 530 RICREEGVERFIHLSYLNA 586
++ +E GVE+FIH+S+LNA
Sbjct: 154 QLSKEAGVEKFIHVSHLNA 172
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 164 bits (399), Expect = 2e-40
Identities = 76/129 (58%), Positives = 101/129 (78%)
Frame = +2
Query: 200 GTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQV 379
G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+
Sbjct: 5 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 64
Query: 380 LFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVER 559
LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ +E GVE+
Sbjct: 65 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKEAGVEK 124
Query: 560 FIHLSYLNA 586
FIH+S+LNA
Sbjct: 125 FIHVSHLNA 133
>BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein.
Length = 706
Score = 36.7 bits (81), Expect = 0.074
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +2
Query: 320 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 499
++GD YD Q L CGD G+ + LLD + VR + G ++ K+ N
Sbjct: 260 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 316
Query: 500 VHVDGVRRIARICREEGVERFIHLSYLNAEE 592
+ I+ +C+E G + FIHL +L +
Sbjct: 317 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 345
>BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein.
Length = 617
Score = 36.7 bits (81), Expect = 0.074
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +2
Query: 320 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 499
++GD YD Q L CGD G+ + LLD + VR + G ++ K+ N
Sbjct: 171 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 227
Query: 500 VHVDGVRRIARICREEGVERFIHLSYLNAEE 592
+ I+ +C+E G + FIHL +L +
Sbjct: 228 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 256
>AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304
protein.
Length = 659
Score = 36.7 bits (81), Expect = 0.074
Identities = 27/91 (29%), Positives = 43/91 (47%)
Frame = +2
Query: 320 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYND 499
++GD YD Q L CGD G+ + LLD + VR + G ++ K+ N
Sbjct: 213 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCL--PCGNVFKEKSALINH 269
Query: 500 VHVDGVRRIARICREEGVERFIHLSYLNAEE 592
+ I+ +C+E G + FIHL +L +
Sbjct: 270 RKIHS-GEISHVCKECG-KAFIHLHHLKMHQ 298
>U47105-1|AAC50558.2| 373|Homo sapiens H105e3 protein.
Length = 373
Score = 30.3 bits (65), Expect = 6.5
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 239 TVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 418
TV G +GF+G+++ +L L Y + +D Q+ D QV F L + +
Sbjct: 41 TVIGGSGFLGQHMVEQL------LARGYAVNVFDIQQ---GFDNPQVRFFLGDLCSRQDL 91
Query: 419 AKAVRYSNVVINLVGRDYETKNFK-YNDVHVDGVRRIARICREEGVERFI 565
A++ N V + + N + + V+ G + + C+E GV++ I
Sbjct: 92 YPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
>BC007816-1|AAH07816.1| 373|Homo sapiens NAD(P) dependent steroid
dehydrogenase-like protein.
Length = 373
Score = 30.3 bits (65), Expect = 6.5
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 239 TVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 418
TV G +GF+G+++ +L L Y + +D Q+ D QV F L + +
Sbjct: 41 TVIGGSGFLGQHMVEQL------LARGYAVNVFDIQQ---GFDNPQVRFFLGDLCSRQDL 91
Query: 419 AKAVRYSNVVINLVGRDYETKNFK-YNDVHVDGVRRIARICREEGVERFI 565
A++ N V + + N + + V+ G + + C+E GV++ I
Sbjct: 92 YPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
>BC000245-1|AAH00245.1| 373|Homo sapiens NAD(P) dependent steroid
dehydrogenase-like protein.
Length = 373
Score = 30.3 bits (65), Expect = 6.5
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 239 TVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESI 418
TV G +GF+G+++ +L L Y + +D Q+ D QV F L + +
Sbjct: 41 TVIGGSGFLGQHMVEQL------LARGYAVNVFDIQQ---GFDNPQVRFFLGDLCSRQDL 91
Query: 419 AKAVRYSNVVINLVGRDYETKNFK-YNDVHVDGVRRIARICREEGVERFI 565
A++ N V + + N + + V+ G + + C+E GV++ I
Sbjct: 92 YPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLI 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,023,239
Number of Sequences: 237096
Number of extensions: 1857458
Number of successful extensions: 2667
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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