Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M20
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.54 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   2.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   2.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   8.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 36  TKQTIKMFKYLIFVALLAFASAKPLLVSYTS 128
           T +  K+  YL +VA LAF   +  + +YTS
Sbjct: 152 TSRRSKVMVYLAWVASLAFCIPQLTIFTYTS 182


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 82  RATKIKYLNILIVCLVRRRVTDG 14
           R+  +K LN+L    +RR+ T+G
Sbjct: 314 RSEVVKILNVLKKIALRRQTTNG 336


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 82  RATKIKYLNILIVCLVRRRVTDG 14
           R+  +K LN+L    +RR+ T+G
Sbjct: 240 RSEVVKILNVLKKIALRRQTTNG 262


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 5/21 (23%), Positives = 10/21 (47%)
 Frame = +3

Query: 144 IYCSGRCCVHRTPGVLCVLCI 206
           + C     + + PG  C +C+
Sbjct: 713 VTCPDNMKLEKVPGECCAICV 733


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 291 ETKYVDVIYFIYLIPI 338
           E   +D ++ +YL+PI
Sbjct: 127 EEAVIDYLFTVYLLPI 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,355
Number of Sequences: 336
Number of extensions: 827
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)