Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M20
         (435 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p pro...    28   6.3  
BT001259-1|AAN71015.1| 1500|Drosophila melanogaster AT02321p pro...    27   8.3  
AY119507-1|AAM50161.1| 1015|Drosophila melanogaster GH12467p pro...    27   8.3  
AE013599-1697|AAF58379.1| 1503|Drosophila melanogaster CG4744-PA...    27   8.3  

>BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p
           protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 18  SVTLRRTKQTIKMFKYLIFVALLAFASAKP 107
           S T  + ++++ MFK ++  ALLA A A+P
Sbjct: 4   STTQTKKQKSLNMFKLVVLSALLAVAVARP 33


>BT001259-1|AAN71015.1| 1500|Drosophila melanogaster AT02321p
           protein.
          Length = 1500

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 226 RSMQPENMQSTQSTPGVRCTQQRPEQYMQQ 137
           +  QP  MQ +Q  P  +  QQ  +Q+MQQ
Sbjct: 856 QGQQPVQMQFSQQQPQQQMQQQMQQQHMQQ 885


>AY119507-1|AAM50161.1| 1015|Drosophila melanogaster GH12467p
           protein.
          Length = 1015

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 226 RSMQPENMQSTQSTPGVRCTQQRPEQYMQQ 137
           +  QP  MQ +Q  P  +  QQ  +Q+MQQ
Sbjct: 368 QGQQPVQMQFSQQQPQQQMQQQMQQQHMQQ 397


>AE013599-1697|AAF58379.1| 1503|Drosophila melanogaster CG4744-PA
           protein.
          Length = 1503

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 226 RSMQPENMQSTQSTPGVRCTQQRPEQYMQQ 137
           +  QP  MQ +Q  P  +  QQ  +Q+MQQ
Sbjct: 856 QGQQPVQMQFSQQQPQQQMQQQMQQQHMQQ 885


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,491,339
Number of Sequences: 53049
Number of extensions: 154211
Number of successful extensions: 908
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)