Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M20
         (435 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    28   2.5  
AF039051-8|AAB94268.3|  309|Caenorhabditis elegans Serpentine re...    28   3.4  
AL132877-15|CAC70111.1|  628|Caenorhabditis elegans Hypothetical...    27   4.4  
Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 54  MFKYLIFVALLAFASAKPLLVSYTSPD 134
           MFK L+F ALLA+A A P+    T+ D
Sbjct: 1   MFKSLVFSALLAYAVAAPMSSMTTAID 27


>AF039051-8|AAB94268.3|  309|Caenorhabditis elegans Serpentine
           receptor, class x protein7 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 21  VTLRRTKQTIKMFKYLIFVALLAFASAKPLLVSYTSPDSCCIY 149
           +TL RT         L+F+ ++A ASA      Y  P  CCI+
Sbjct: 111 ITLNRTNVFTFCRTLLLFIPIIAVASAAATFSQYIFP--CCIF 151


>AL132877-15|CAC70111.1|  628|Caenorhabditis elegans Hypothetical
           protein Y105E8B.9 protein.
          Length = 628

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 5   RPMTISHSPTN*TNNQNVQILDLRC 79
           RP+T  + PTN  N+Q   ++D  C
Sbjct: 464 RPVTTVYGPTNFDNDQTADLMDFIC 488


>Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical
           protein T23D8.9b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 223 SMQPENMQSTQSTPGVRCTQQRPEQYMQQ 137
           SMQP   Q  Q TP    TQQ+ +   QQ
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQ 85


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 223 SMQPENMQSTQSTPGVRCTQQRPEQYMQQ 137
           SMQP   Q  Q TP    TQQ+ +   QQ
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQ 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,957,023
Number of Sequences: 27780
Number of extensions: 81193
Number of successful extensions: 313
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)