Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M19
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161712-6|CAC70141.1|  248|Caenorhabditis elegans Hypothetical ...   202   2e-52
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U29244-10|AAC71091.2|  908|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U28738-7|AAA68312.1|  341|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U28738-5|AAT92055.1|  342|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U28409-2|AAN60501.1|  288|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical ...    29   4.9  
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine re...    28   8.5  

>AL161712-6|CAC70141.1|  248|Caenorhabditis elegans Hypothetical
           protein Y66D12A.9 protein.
          Length = 248

 Score =  202 bits (493), Expect = 2e-52
 Identities = 91/202 (45%), Positives = 144/202 (71%), Gaps = 4/202 (1%)
 Frame = +2

Query: 179 DYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPA----T 346
           +YK  L  +AE L+ + FP+K+++ + LL++       L+++  D ++ IP P A    T
Sbjct: 15  EYKQKLFAEAERLVKEEFPKKVIEFDALLKSPKLSYDRLAEILPDKSLNIPIPDALNGTT 74

Query: 347 SNNEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDS 526
            ++EP  KRQR+D          +G  ++   +G+VPCN+ L+ L+ LV+P +R+ VE  
Sbjct: 75  DSDEPAVKRQRVDEKP-------KGAPIFAFSSGTVPCNENLAQLMDLVRPKLRDAVEQC 127

Query: 527 NLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSKV 706
           N +KMWI+ +IP+IEDGNNFGV IQE+TL+E+++VESEAA+F DQ+SRYF +R K+++K+
Sbjct: 128 NNVKMWITLLIPRIEDGNNFGVGIQEETLSEVRNVESEAASFLDQMSRYFTTRGKLITKI 187

Query: 707 AKYPHIDDYRRAVXELDEKEYL 772
           AKYPH+DDYRRA+ ++DEK+++
Sbjct: 188 AKYPHVDDYRRAILDMDEKQFI 209


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
           protein T20F7.5 protein.
          Length = 1065

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 269 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNS 409
           T+N        +   +  P+PTPP T+ +E     +  D + L+ NS
Sbjct: 492 TANQTGSTDGTITSGIQSPVPTPPVTNEHESQRSSRLSDFTNLAGNS 538


>U29244-10|AAC71091.2|  908|Caenorhabditis elegans Hypothetical
           protein ZK1248.10 protein.
          Length = 908

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 248 KLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNST 412
           K +  L+ S+   RN S V ++ + P P PP  S  +P  + Q L   E  + ++
Sbjct: 123 KSDSSLDISSLTGRNSSSVLEECSSPSPVPPPRS-PKPKKRTQFLTEEETDAETS 176


>Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 281 QNRNLSDVHQDLNIPIPTPPATSNNEPN 364
           QN N+S+VH  ++I  PT     NN  N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151


>U28738-7|AAA68312.1|  341|Caenorhabditis elegans Hypothetical
           protein T28D9.3a protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 269 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 415
           T  F N +     Q L +P   PP T  N  + +R RLD+   S++S+I
Sbjct: 274 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 320


>U28738-5|AAT92055.1|  342|Caenorhabditis elegans Hypothetical
           protein T28D9.3b protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 269 TSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTI 415
           T  F N +     Q L +P   PP T  N  + +R RLD+   S++S+I
Sbjct: 275 TDLFSNNSTESETQPLLLP--RPPRTPRNSEDEERHRLDAVLPSTDSSI 321


>U28409-2|AAN60501.1|  288|Caenorhabditis elegans Hypothetical
           protein T25D10.5 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 396 NSDESSL*RLAFGSLFDV-AGGVGIGMFKS*CTSDKFRF 283
           NSD+ S+ +   G   D   GG+ + +F S  TS+K+RF
Sbjct: 9   NSDKYSI-KSVLGKFCDTNCGGINVSLFVSETTSNKYRF 46


>AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 281 QNRNLSDVHQDLNIPIPTPPATSNNEPN 364
           QN N+S+VH  ++I  PT     NN  N
Sbjct: 124 QNMNISNVHNGVHISTPTENLAENNANN 151


>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.19 protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 558 IINEIHILSKFESSTSSLMCGLTRCIRSL 472
           ++NEI +LS   +  SS+M  L +C R+L
Sbjct: 421 LVNEISLLSSDSAEMSSVMAELDKCSRTL 449


>AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein40 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 462 TSHSVILYILLSHTLGNLLKIQTY 533
           TSHS++L  +LS ++ NLLKI  +
Sbjct: 112 TSHSMLLLAVLSSSIRNLLKISMW 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,492,768
Number of Sequences: 27780
Number of extensions: 332810
Number of successful extensions: 1045
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)