Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M18
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   0.74 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   0.97 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   0.97 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   3.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.1  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +3

Query: 228 KCELRILSQFGFN-LNPDWELPLKKDTQN 311
           K  L     + F+ L+ DWE PL+ D  N
Sbjct: 124 KSALEFFETYNFDGLDVDWEYPLEGDRAN 152


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 168 VVQKWYHPWSFINSPGWVQIKCELRILSQ 254
           +V+K+ H  +FIN      +K  L +LSQ
Sbjct: 174 LVEKYRHQKNFINESNVETVKFNLFLLSQ 202


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 172 TTSTQEHNTSSHRCNASSFKPIH 104
           T +   HNTSSH   A ++ P +
Sbjct: 287 TANGHGHNTSSHNYYAQNYAPTY 309


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 288 PLKKDTQNQPLKEGVRDMLVKHH 356
           P+     N+P +    +ML++HH
Sbjct: 97  PINHQNYNEPYQRTHENMLLRHH 119


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 288 PLKKDTQNQPLKEGVRDMLVKHH 356
           P+     N+P +    +ML++HH
Sbjct: 97  PINHQNYNEPYQRTHENMLLRHH 119


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 288 PLKKDTQNQPLKEGVRDMLVKHH 356
           P+     N+P +    +ML++HH
Sbjct: 97  PINHQNYNEPYQRTHENMLLRHH 119


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 200 YKFAWMGTDQM*ITYTFSVWFQFEPRLGASI 292
           Y   WM  +     Y  S W QF+  L  SI
Sbjct: 375 YHDIWMSGESFKSPYKASCWAQFKAVLWRSI 405


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 200 YKFAWMGTDQM*ITYTFSVWFQFEPRLGASI 292
           Y   WM  +     Y  S W QF+  L  SI
Sbjct: 375 YHDIWMSGESFKSPYKASCWAQFKAVLWRSI 405


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 224 LYPSRRIYK*PWMIPFLNDINTRTQYFKPQM 132
           LYP RR    P+     N ++T  Q+  P M
Sbjct: 633 LYPDRRSMGYPFDRMPRNGVDTLQQFLTPNM 663


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 420 YITQHSLYYNKFM*FT 373
           Y T H L+Y  F+ FT
Sbjct: 78  YFTVHLLFYCPFIIFT 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,548
Number of Sequences: 336
Number of extensions: 2738
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)