Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M18
         (441 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67954-1|AAB52605.2|  826|Caenorhabditis elegans Hypothetical pr...   116   1e-34
U56961-3|AAK39294.1|  634|Caenorhabditis elegans Hypothetical pr...    42   2e-04
U41539-2|AAB52497.2|  244|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81051-12|CAB02861.2|  228|Caenorhabditis elegans Hypothetical p...    27   4.6  
Z22181-8|CAA80190.1|   80|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical ...    27   6.0  
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ...    27   6.0  

>U67954-1|AAB52605.2|  826|Caenorhabditis elegans Hypothetical
           protein F41D9.1 protein.
          Length = 826

 Score =  116 bits (280), Expect(2) = 1e-34
 Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 3/98 (3%)
 Frame = +3

Query: 3   VLTPEALLYXCVQAINLSHDNAHAQMDVKLRTLICMGLNEEALHLWLEVLCSCVD---VV 173
           +LTPE LL+  VQ IN SH+   A  DVKLR+L+ +G+NE+ +HLW ++LCS      + 
Sbjct: 670 ILTPEELLFRSVQLINDSHNAVSAHSDVKLRSLLVVGVNEQCIHLWFDLLCSATQHEHIR 729

Query: 174 QKWYHPWSFINSPGWVQIKCELRILSQFGFNLNPDWEL 287
            K+YH W+FI SP W QIKC+LR+LSQF FNL+  +E+
Sbjct: 730 NKYYHSWAFIRSPAWRQIKCDLRLLSQFSFNLSMSFEI 767



 Score = 46.8 bits (106), Expect(2) = 1e-34
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +3

Query: 297 KDTQNQPLKEGVRDMLVKHHLFSWDL 374
           K    +PLK+GV DML+KHHLFSWDL
Sbjct: 801 KQNGEEPLKQGVTDMLIKHHLFSWDL 826


>U56961-3|AAK39294.1|  634|Caenorhabditis elegans Hypothetical
           protein T19D7.4 protein.
          Length = 634

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 22/94 (23%), Positives = 42/94 (44%)
 Frame = +3

Query: 6   LTPEALLYXCVQAINLSHDNAHAQMDVKLRTLICMGLNEEALHLWLEVLCSCVDVVQKWY 185
           +T + +L   ++ I  +H       D   +  +   LNE+ L  WL ++     VV+  Y
Sbjct: 531 ITSKQVLLTTIENIISTHARLKRSKDAHWKAFVSAALNEKKLPAWLRIIFRTRQVVEMCY 590

Query: 186 HPWSFINSPGWVQIKCELRILSQFGFNLNPDWEL 287
           + WS++   G  ++   L  L ++  +L  D  L
Sbjct: 591 NSWSYVARTGCEELYTLLEGLHKYSIHLPVDLAL 624


>U41539-2|AAB52497.2|  244|Caenorhabditis elegans Hypothetical
           protein K05G3.2 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 289 GSSQSGFKLKPN*ESIRNSHLICTHPGEFINDHG*YHF 176
           GS+ +   ++   +S+R   + CT P  + N HG  HF
Sbjct: 60  GSNVNNDGMRNTDQSLRRQEISCTPPMRYENRHGSQHF 97


>Z81051-12|CAB02861.2|  228|Caenorhabditis elegans Hypothetical
           protein C55A6.1 protein.
          Length = 228

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 257 WFQFEPRLGASIEKRYTKSATEGRCKRYAC*TPFIL 364
           W++FEPR    IE+ Y  +A +  C+   C  P+++
Sbjct: 122 WWRFEPRNEREIEEAY--NAGKCHCEVVICGRPYVI 155


>Z22181-8|CAA80190.1|   80|Caenorhabditis elegans Hypothetical
           protein ZK632.10 protein.
          Length = 80

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 99  LICMGLNEEALHLWLEVLCSCVDVVQKWY 185
           L C+G+    +H W  +LC    VVQ  Y
Sbjct: 34  LTCLGIIPGIIHAWYIILCKEKTVVQNIY 62


>AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical
           protein Y116A8C.13 protein.
          Length = 833

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -1

Query: 141 ATDVMLLHLSP---YILMCAISHPSEHEHCHVINLLLG 37
           A DV L HL     YIL CA S   +H H  + + + G
Sbjct: 424 AADVDLKHLPEKHEYILFCAASPIQKHVHSEICDYMTG 461


>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
           protein R52.2 protein.
          Length = 1019

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 171 RHQHKNTILQATDVMLLHLSPYILMCAISHPSEHEHCHVIN 49
           RH H+    + T+   L  SP I   + SH   HE C + N
Sbjct: 295 RHTHQQLPNKTTNGQTL--SPCIFCSSTSHVHRHEECPIFN 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,582,514
Number of Sequences: 27780
Number of extensions: 228812
Number of successful extensions: 505
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)