Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_M16
(759 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1821 + 40126389-40126508,40126589-40126646,40126782-401268... 46 2e-05
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 41 0.001
06_01_0228 - 1736373-1736721,1739915-1740120,1740513-1740844,174... 40 0.002
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 38 0.007
04_04_0010 - 22137258-22137428,22137734-22137794,22137917-221379... 38 0.011
07_03_1724 + 29056386-29056717,29057026-29057245,29057334-290575... 37 0.015
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 37 0.015
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 37 0.020
09_05_0003 + 20016534-20016703,20017679-20017915,20018585-200186... 35 0.061
03_04_0189 - 18256878-18257322,18260724-18260849,18261321-18261691 35 0.081
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 34 0.14
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 33 0.19
12_01_0117 + 893924-893971,894944-895003,895024-895174,895410-89... 32 0.57
05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870 32 0.57
03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059 32 0.57
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 31 0.75
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370... 31 1.3
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 30 1.7
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 30 2.3
07_03_0690 - 20714691-20714922,20715498-20715572,20715914-207160... 30 2.3
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 30 2.3
03_02_0068 + 5390004-5390425,5390517-5390949 30 2.3
10_01_0202 + 2178297-2178406,2180725-2180980,2181838-2181912,218... 29 3.0
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 29 3.0
02_05_0504 - 29590852-29591862 29 3.0
02_05_0450 - 29117826-29118212,29118307-29118733,29119158-291192... 29 3.0
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951... 29 4.0
10_01_0129 + 1535823-1537196 29 5.3
07_01_0614 - 4545306-4545833 29 5.3
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 29 5.3
01_06_0985 - 33594588-33595451,33597655-33598518 29 5.3
09_06_0145 + 21162308-21163666 28 7.0
07_03_1173 - 24526632-24526755,24527057-24527226,24527441-245275... 28 7.0
01_01_0780 - 6036454-6037992 28 7.0
>01_06_1821 +
40126389-40126508,40126589-40126646,40126782-40126837,
40127076-40127176,40127336-40127405,40127501-40127570,
40127970-40128026,40128110-40128177,40128258-40128338,
40128474-40128551,40128644-40128799,40128874-40128933,
40129253-40129317,40130002-40130059
Length = 365
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 260 CVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPP--GLM 433
CV A G NPPVL HG A S+R ++ ++ + ++ I D G G SD+ P G
Sbjct: 115 CVEA-GSSSNPPVLFIHGFPSQAYSYRNVLPVVSDNYHAIAFDWLGFGFSDKPQPDYGFD 173
Query: 434 INIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDP 592
+ + ++ ++ D ++V A I Y + +KL LI ++P
Sbjct: 174 YTLDEYTSSLESLINAVAPDKLSIVVQGYFAPIVIKYANEHQDKLNHLILVNP 226
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 224 KXWYIQVPWGRMCVVAWGDCCNPPVLLCHGLADSATSFR-PLIKLMPEKFYFIGIDLPGC 400
+ W V + V G PPVLL HG + S+R + L F + DL G
Sbjct: 7 RHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMAALAARGFRALAPDLRGY 66
Query: 401 GKSDRFPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLI 580
G S ++ +V + A+ H +VGH LGA + L P+ L ++
Sbjct: 67 GDSTVPDDPAAYTVFHIVGDLVALLDHLALPKVMVVGHDLGAQVAWHLCLFRPDMLLAVV 126
Query: 581 EI 586
+
Sbjct: 127 NL 128
>06_01_0228 -
1736373-1736721,1739915-1740120,1740513-1740844,
1740935-1741499
Length = 483
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Frame = +2
Query: 296 VLLCHGLADSA-----TSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYA 460
V+ HG S+ T F + ++ +DL G G+S + P + + + V
Sbjct: 196 VVFVHGFISSSVFWTETVFPAFSEAAKGRYRMFAVDLLGFGRSPK-PADSLYTLREHVEM 254
Query: 461 VN-AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAVPPEK 622
+ +V + +R F++V HSLG+++ + YP+ + L + P ++ VP E+
Sbjct: 255 IERSVLQRYRLRKFHVVAHSLGSVLALALAVKYPDAVQSLTLLAP-PYFPVPEEE 308
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +2
Query: 290 PPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPG 427
PP+LL HG S +R I ++ E + IDL G G SD+ PPG
Sbjct: 119 PPLLLVHGFGASVGHWRRNIGVLSESYTVYAIDLLGFGASDK-PPG 163
>04_04_0010 -
22137258-22137428,22137734-22137794,22137917-22137984,
22138524-22138733,22138867-22138907,22139011-22139060,
22139260-22139348,22139468-22139542,22139791-22139882,
22140131-22140182,22140515-22140631,22141267-22141496,
22141618-22141672,22141781-22141900
Length = 476
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = -2
Query: 446 RIC*SSGPAGTGPTCRSPGGLCL*NKTSRASI*LEGGSWSRSLLGHGRAEPGDCSNRPKP 267
RIC + G CRS G + + AS + G+ +R LLG G A G CS++ K
Sbjct: 79 RICIAESLMGHWLPCRSDGKASSHHGVAAASAAVVSGAGARRLLGEGTAGSGHCSSKGKV 138
Query: 266 PRTS 255
P S
Sbjct: 139 PLLS 142
>07_03_1724 +
29056386-29056717,29057026-29057245,29057334-29057530,
29057628-29057988
Length = 369
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 IGIDLPGCGKSDRFPPGLMINIYDLVYAVN-AVAKHFRWDAFNLVGHSLGAIIGKLYNLV 553
+ +DL G GKS + P M + D V + ++ +F+LV HS+G II
Sbjct: 113 LAVDLLGFGKSPK-PANCMYRLKDHVEMIERSLIDPLNLSSFHLVSHSMGCIIALALAAK 171
Query: 554 YPEKLTKLIEIDPINFYA 607
+PE++ + I P F A
Sbjct: 172 HPERVRSITLIAPPYFGA 189
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 37.1 bits (82), Expect = 0.015
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Frame = +2
Query: 290 PPVLLCHGLADSATSFRPLIKLMPEKFY-FIGIDLPGCGKSDRFPPGLMINIYDLVYAVN 466
P VL HG + S+R + + + Y + DL G G + P I+ LV +
Sbjct: 32 PAVLFVHGFPELWYSWRHQMGHLAARGYRCVAPDLRGYGGTTAPPEHTSYTIFHLVGDLV 91
Query: 467 AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAVPPEKFPKWYKRH 646
A+ +VGH GAI+ L+ P+++ L+ + P EK +++
Sbjct: 92 ALLDALELPQVFVVGHDWGAIVSWNLCLLRPDRVRALVNLSVAFMPRRPAEKPLDYFRGA 151
Query: 647 FVDYY 661
+ D Y
Sbjct: 152 YGDDY 156
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Frame = +2
Query: 275 GDCCNPPVLL-CHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDL 451
GDC + V+L HG ++ + P++K + I +DLPG G+S+ + N +
Sbjct: 1475 GDCTHEKVILFLHGFLGTSEDWVPMMKALSPSARVIAVDLPGHGESEILQHDVE-NSNQI 1533
Query: 452 VYAVNAVA-------KHFRWDAFNLVGHSLGAII 532
++V +VA ++ A +VG+S+GA I
Sbjct: 1534 SFSVQSVADLLLKLIRNITDGAVVVVGYSMGARI 1567
>09_05_0003 +
20016534-20016703,20017679-20017915,20018585-20018631,
20018932-20019050,20019128-20019288,20019379-20019488,
20019571-20019670,20019701-20019743,20020375-20020503
Length = 371
Score = 35.1 bits (77), Expect = 0.061
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Frame = +2
Query: 290 PPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYD-----LV 454
P +++ HG S F + +F I ID G G S R P + +
Sbjct: 101 PTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSR--PDFTCKSTEETEAWFI 158
Query: 455 YAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINF 601
+ K F L+GHS G + Y L +PE + LI + P F
Sbjct: 159 DSFEEWRKAKNLSNFILLGHSFGGYVAAKYALQHPEHVQHLILVGPAGF 207
>03_04_0189 - 18256878-18257322,18260724-18260849,18261321-18261691
Length = 313
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +2
Query: 296 VLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKS--DRFPPGLMINIYDLVYAVNA 469
++L HG + ++ L+ + + + D G G + D F + + A
Sbjct: 21 IVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNPDYFDFSRYATLEGYALDLLA 80
Query: 470 VAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLI 580
+ + R + VGHS+ A+IG + ++ P+ +KL+
Sbjct: 81 ILQELRVASCIYVGHSVSAVIGAIASISRPDLFSKLV 117
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +2
Query: 293 PVLLC-HGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNA 469
PV+ C HG S SF M EK + +DL G GKS ++I L V A
Sbjct: 75 PVVFCLHGGGYSGLSFALAASRMKEKARVVSMDLRGHGKSTTSDDS-DLSIETLSSDVIA 133
Query: 470 VAKHFRWD---AFNLVGHSLGAII 532
V + D A LVGHS+G +
Sbjct: 134 VLRTLYGDSPPAIILVGHSMGGSV 157
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 33.5 bits (73), Expect = 0.19
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +2
Query: 275 GDCCNPPVLLCHGLADSATSFRPLI--KLMPE---KFYFIGIDLPGCGKSDRFPPGLMIN 439
G VL HG S+ + + + PE + +DL G G+S + P +
Sbjct: 190 GAATEEDVLFIHGFISSSGFWTETVLPNVSPEARARRRLFAVDLLGFGRSPK-PADSLYT 248
Query: 440 IYDLVYAVN-AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAVP 613
+ + V + +V + +F++V HSLG+I+ + YP + L + P ++ VP
Sbjct: 249 LREHVEMIERSVIERHGVKSFHIVAHSLGSILALALAVKYPAAVRSLTLVAP-PYFPVP 306
>12_01_0117 +
893924-893971,894944-895003,895024-895174,895410-895884,
895974-896316,896347-896391,896533-896631,896708-896828,
897032-897255
Length = 521
Score = 31.9 bits (69), Expect = 0.57
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Frame = +2
Query: 293 PVLLCHGLADSATSF----RPLIKLMPEKFYFIGIDLPGCGKSDRF----PPGLMINIYD 448
P++L HG S S+ RPL ++ K + D P G + R IN Y
Sbjct: 164 PIVLLHGFGSSVFSWTHIMRPLARIAGAKV--LAFDRPAFGLTSRTIWSGDDTKPINPYS 221
Query: 449 LVYAVNAVAKHFRWDAFN---LVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAV 610
+ ++V A LVGHS G ++ PE++ L+ + P F V
Sbjct: 222 MAFSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEAYFEAPERVAALVLVAPAIFVPV 278
>05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870
Length = 331
Score = 31.9 bits (69), Expect = 0.57
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +2
Query: 254 RMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFY-FIGIDLPGCGKSDRFPPGL 430
RM V G PPVLL HG ++R ++ + + Y + DL G G SD L
Sbjct: 23 RMHVAEAGPPGAPPVLLLHGFPQVWYAWRHQMRALADAGYRAVAPDLRGYGDSDAPAAEL 82
Query: 431 ----MINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPIN 598
M + DLV ++AV + F +V H GA+ L P+++ L+ + +
Sbjct: 83 QYTAMHVVGDLVALLDAVVGAGK-PVF-VVAHDWGALTAWNLCLFRPDRVRALVSLS-VA 139
Query: 599 FYAVPPEKFP 628
F P + P
Sbjct: 140 FTPRSPARRP 149
>03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059
Length = 338
Score = 31.9 bits (69), Expect = 0.57
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 296 VLLCHGLADSATSFRPLIK-LMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNAV 472
VL HG + S+R ++ L F + DL G G +D P + + +V + A+
Sbjct: 38 VLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDLRGYGDTDAPPEIESYSAFHVVGDLVAL 97
Query: 473 AKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLI 580
+VGH GAII L P+++T L+
Sbjct: 98 LDALGLAKVFVVGHDWGAIIAWYMCLFRPDRVTALV 133
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 491 DAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAVP 613
DAFN H LG+++G+ VYP + + DP+N VP
Sbjct: 610 DAFNYTDHYLGSVLGRYDGNVYPALYEEAWK-DPLNDTDVP 649
>05_03_0369 -
13136146-13136175,13136237-13136908,13136926-13137016,
13137184-13137416,13137459-13137731,13137877-13138265,
13138325-13139156,13139847-13139922,13140027-13140414,
13141395-13141748,13142069-13142333,13143366-13143716
Length = 1317
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = +1
Query: 241 GSLGPDVRGGLGRLLQSPGSALPWPSRLRDQLPPSNQIDAREVLFYRHRP 390
G G DVRGGL R + G P S + PP +Q D R V H P
Sbjct: 446 GKGGRDVRGGLRRCRRREGGRRP-DSPTTEGRPPISQKDDRLVTLTMHDP 494
>11_01_0110 +
850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 434 INIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAVP 613
IN Y +V A A LVGHS G ++ PE++ L+ + P F V
Sbjct: 194 INPYSMVIATLAFIDQLGAKKAVLVGHSAGCLVAVEAYFEAPERVAALVLVAPAIFVPVF 253
Query: 614 PEKFPKWY 637
K K Y
Sbjct: 254 RRKGVKEY 261
>07_03_1003 +
23239829-23240121,23240257-23240349,23240785-23240993,
23241585-23241729,23241809-23241881,23242165-23242311,
23242411-23242536,23242653-23242712
Length = 381
Score = 29.9 bits (64), Expect = 2.3
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Frame = +2
Query: 290 PPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR-FPPGLMINIYDLV---Y 457
P ++L HG ++ +R I ++ K IDL G G SD+ P L + Y
Sbjct: 117 PALVLIHGFGANSDHWRKNIPVLALKNRVYAIDLIGYGYSDKPNPRELGESFYTFETWGE 176
Query: 458 AVNA-VAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEIDPINFYAVPPEKFPKW 634
+N A+ + +AF + +S+G ++G + P+K + ++ I+ + K P W
Sbjct: 177 QLNTFCAEVIKSEAF-FICNSIGGLVGLQAAAMEPQKCKGIFLLN-ISLRMLHISKQP-W 233
Query: 635 YKRHFVDYYE 664
+ R F+ ++
Sbjct: 234 FGRPFIKSFQ 243
>07_03_0690 -
20714691-20714922,20715498-20715572,20715914-20716006,
20716177-20716209,20717521-20717710,20717992-20718061,
20718215-20718370,20718529-20718555
Length = 291
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 256 DVRGGLGRLLQSPGSALP-WPSRLRDQLPPSNQIDAREVLFY 378
D GGLGRL+ +P + P SR + P + +D R V+F+
Sbjct: 103 DDMGGLGRLVHTPVAGTPGGKSRRLGRQPAAPWLDPRRVVFF 144
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 254 RMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPE 364
++ + W CC P LLC G D+ +++ L+ L+ E
Sbjct: 965 KLLPIGWTACCASPSLLCEG--DTVLAYQQLVLLLIE 999
>03_02_0068 + 5390004-5390425,5390517-5390949
Length = 284
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +2
Query: 296 VLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGK--SDRFPPGLMINIYDLVYAVNA 469
V+L HG +++ ++ + + DL G D F N+ V + A
Sbjct: 38 VVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYDNLDAYVDDLLA 97
Query: 470 VAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEKLTKLIEI 586
+ R VGHS+ A+IG L ++ P+ KL+ I
Sbjct: 98 ILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLI 136
>10_01_0202 +
2178297-2178406,2180725-2180980,2181838-2181912,
2182386-2182436,2182598-2182724,2182806-2182952,
2183846-2183976,2184088-2184189,2184604-2184702,
2185117-2185182,2185218-2185448
Length = 464
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 296 VLLCHGLADSATSFRPLI--KLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNA 469
V LCHG D+ T F I K+ + +D PG G S+ GL I V+
Sbjct: 191 VCLCHGYGDTCTFFLDGIARKIASAGYGVFALDYPGFGLSE----GLHGFIPSFDTLVDD 246
Query: 470 VAKHF 484
VA+HF
Sbjct: 247 VAEHF 251
>09_06_0061 +
20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 290 PPVLLCHGLADSATSFRPLIKLMPEKFYFI-GIDLPGCGKSDRFPPGLMINIYDLVYAVN 466
P VLL HG S FR I + ++ + I L G GKS++ P IN +L++ +
Sbjct: 480 PSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSEK--PN--INYSELLW--S 533
Query: 467 AVAKHFRWDA----FNLVGHSLGAIIGKLYNLVYPEKLTKLI 580
+ + F D +LVG+S+G I + ++P LI
Sbjct: 534 ELLRDFIVDVVKEPVHLVGNSIGGYICSITASLWPSLARSLI 575
>02_05_0504 - 29590852-29591862
Length = 336
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = -2
Query: 491 PNENASRPRSRRTPDRIC*SSGPAGTGPTCRSPGGLCL*NKTSRASI*LEGGSWSRSLLG 312
P + S+ +PD+ G G GG +S A + +EGGS S G
Sbjct: 36 PTSHVKMEHSKMSPDKSPVGEGDHAGGSGSGGVGGDH--QPSSSAMVPVEGGSGSAGGSG 93
Query: 311 HG------RAEPGDCSNRPKPP 264
G R P N+PKPP
Sbjct: 94 SGGPTRRPRGRPPGSKNKPKPP 115
>02_05_0450 -
29117826-29118212,29118307-29118733,29119158-29119296,
29119426-29119530,29119624-29119705
Length = 379
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 293 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR 415
P++L HG SA +R I + +K+ IDL G G S++
Sbjct: 94 PIVLIHGFGASAFHWRYNIPELAKKYKVYAIDLLGFGWSEK 134
>06_03_0725 -
23894215-23894412,23894660-23894803,23895058-23895126,
23895197-23895267,23895357-23895444,23895522-23895707,
23895805-23895903,23896002-23896082,23896575-23896634,
23896656-23896779,23897026-23897120,23897205-23897331,
23897559-23897662,23897883-23897945
Length = 502
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 290 PPVLLCHGLADS-ATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGL-MINIYDLVYAV 463
P V+ CHG + A + + L+P +D G G S L DL AV
Sbjct: 47 PCVIYCHGNSGCRADANEAAVILLPSNITLFTLDFAGSGLSGGEYVSLGWHEKQDLKCAV 106
Query: 464 NAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYP 559
+ + + L G S+GA+ LY P
Sbjct: 107 SFLRNNKEVSCIGLWGRSMGAVTSLLYGAEDP 138
>10_01_0129 + 1535823-1537196
Length = 457
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -2
Query: 428 GPAGTGPTCRSPGGLCL*NKTSRASI*LE-GGSWSRSLLGHGRAEPGDCSNRPKPPRTSG 252
G G P PGG N + R+S GS S G R+ P D +P PPR
Sbjct: 15 GGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSGSSPTSSPGQIRSPPDDGDGQPPPPRRRR 74
Query: 251 PKEP 240
EP
Sbjct: 75 RGEP 78
>07_01_0614 - 4545306-4545833
Length = 175
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 230 WYIQVPWGRMCVVAWGDCCNPPVLLC 307
W+ +PW R A D C+P + LC
Sbjct: 114 WFPNIPWDRQPFSALRDLCDPFLALC 139
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +2
Query: 386 DLPGCGKSDRFPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPEK 565
D G G+S P + + A+ H W ++ GHS+GA+I + P +
Sbjct: 85 DNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGWKKAHVFGHSMGAMISCKLAAMAPHR 144
Query: 566 LTKL 577
+ L
Sbjct: 145 ICSL 148
>01_06_0985 - 33594588-33595451,33597655-33598518
Length = 575
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = -1
Query: 342 GRKLVAESARP---WQSRTGGLQQSPQATTHIRPQGTCMYHXFSN 217
G + AE RP W+ G Q+ HI+ G C + F N
Sbjct: 450 GNVVTAEVRRPLMLWRQPKGATQEEVLVVEHIQTDGVCKFDVFVN 494
>09_06_0145 + 21162308-21163666
Length = 452
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 313 PSRLRDQLPPSNQIDAREVLFYRHRPPGLRQVGPVPAGPDDQHIRSGVRRERG 471
P R + PP + + R V +YR PP G V QH G G
Sbjct: 187 PGMFRPRDPPLVEFEHRGVEYYRPPPPAAGVDGDVGGDHKQQHGHGGEEASHG 239
>07_03_1173 -
24526632-24526755,24527057-24527226,24527441-24527506,
24527858-24527953,24528340-24528438,24528730-24528819,
24529016-24529111,24529561-24529654,24530254-24530351,
24530395-24530679
Length = 405
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 503 LVGHSLGAIIGKLYNLVYPEKLTKLIEI 586
LVG SLGA + + + YPE ++KLI I
Sbjct: 171 LVGPSLGAAVAIDFTVNYPEAVSKLIFI 198
>01_01_0780 - 6036454-6037992
Length = 512
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 395 GCGKSDRFPPG-LMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVY 556
G G + F G LM+ I D + A + R DAF+LVGH G + +NL+Y
Sbjct: 78 GAGLTADFLFGRLMVFIRDSELSRRVFA-NVRADAFHLVGHPFGKKLFGDHNLIY 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,451,791
Number of Sequences: 37544
Number of extensions: 444800
Number of successful extensions: 1403
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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