Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M13
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    28   0.40 
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    25   2.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.7  
AY604021-1|AAT38515.1|  118|Anopheles gambiae LZ9988P protein.         23   8.5  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   8.5  
AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding pr...    23   8.5  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   8.5  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
 Frame = +2

Query: 488 NVVTNSLVTILKSDPKGALSGIFSQIHQNTDGELANEI--VRERCIKFLSSKIQQLGREI 661
           NV+ N ++T L   P   + G    I     GE   EI  +    +  + S +QQ+  EI
Sbjct: 613 NVMYNGVLT-LGLPPGPEVIGFADDIALTVLGESIEEIELLTSDSVSRIESWMQQMRLEI 671

Query: 662 INKEAEELIITECKKILEDVVAEEFEHIMELLTWSRLG 775
            +K+ E LII+  K +    +    E I  +     LG
Sbjct: 672 AHKKTEFLIISSHKTVQSGSIRVGDERIESIRHLKYLG 709


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 248 GSDKEKRLASQFIAKFFNSFPTLSEQAIEAQFDLCEDDDVAIRKQAI 388
           GSD ++      + + +N F   +EQ + A    C D   A  KQ +
Sbjct: 103 GSDIDRHYLQYGLGQDYNCFRQKAEQCLAANTSPCNDPCEAAYKQEL 149


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = +2

Query: 419 KEHTQRIADILAQLLQSEDSTEINVVTNSLVT-ILKSDPK-GALSGIFSQIHQNTDGELA 592
           +EH + +AD  A+L Q    TE N+  NS+V+ + K++ K G     F +I    D  L 
Sbjct: 691 QEHEKELADFRAELKQ----TEANI--NSIVSEMQKTETKQGKSKDAFEKI--QADIRLM 742

Query: 593 NEIVRERCIKFLSSKIQQLGREIINKEAEELIITECKKILEDVVAEE 733
            + +  R  +F S K + L +   N EA    +T  K+ LE+ + +E
Sbjct: 743 KDEL-SRIERFRSPKERSLAQCKANLEA----MTSTKEGLENELHQE 784


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 320 EQAIEAQFDLCEDDDVAIRKQAIKDLPVLCKEHKEHTQRIADILAQLLQSEDSTEINVVT 499
           E  IE Q  +C D +   R         LCK  +E  + IA++ + + +SE   E N  T
Sbjct: 215 EHYIEFQ-KVCRDIEYLTRLYVSYRYLQLCKGVEESERTIANLQSVIGESEQKIESNCAT 273


>AY604021-1|AAT38515.1|  118|Anopheles gambiae LZ9988P protein.
          Length = 118

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 572 NTDGELANEIVRERCIKFL-SSKIQQLGREIINKEAE 679
           N DG+L  E + E+  KF+   +I+ L +    +EA+
Sbjct: 62  NKDGQLQEETITEQLSKFMPRERIESLVKNCNFQEAD 98


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 301 VKKLRNELRCQTFLFVRSLYGCEYF 227
           V +LR E      L  RSLY C YF
Sbjct: 234 VARLRREGHDACSLAARSLYECYYF 258


>AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding
           protein AgamOBP25 protein.
          Length = 149

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 572 NTDGELANEIVRERCIKFL-SSKIQQLGREIINKEAE 679
           N DG+L  E + E+  KF+   +I+ L +    +EA+
Sbjct: 86  NKDGQLQEETITEQLSKFMPRERIESLVKNCNFQEAD 122


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 301 VKKLRNELRCQTFLFVRSLYGCEYF 227
           V +LR E      L  RSLY C YF
Sbjct: 234 VARLRREGHDACSLAARSLYECYYF 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,274
Number of Sequences: 2352
Number of extensions: 14917
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)