Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M10
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.8  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 327 RMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYV 181
           R+ I+S    V   +  G+  LS SL    +  +   K+RV SA  EY+
Sbjct: 383 RLNIISNLDCVNEVI--GIQQLSQSLLPAIVELAEDSKWRVRSAIIEYM 429


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = +2

Query: 137 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELST 268
           CY     G     S+  S++ +C RY  A D        D L +
Sbjct: 616 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGS 659


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = +2

Query: 137 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELST 268
           CY     G     S+  S++ +C RY  A D        D L +
Sbjct: 508 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLGS 551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,924
Number of Sequences: 336
Number of extensions: 1842
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)