Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_M10
         (480 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0010 + 74517-74529,76294-76394,76495-76526,76652-76662,804...    30   1.1  
11_01_0010 + 78629-78641,80422-80522,80633-80664,80790-80800,845...    30   1.1  
01_07_0227 + 42144437-42144446,42145059-42145428,42145528-421456...    30   1.1  
06_01_1107 + 9120664-9120793,9120882-9121615,9121694-9123069,912...    28   3.4  
04_01_0048 + 522423-522552,522641-523374,523453-524828,528100-52...    28   4.5  
03_03_0060 - 14157352-14158851                                         27   7.9  

>12_01_0010 + 74517-74529,76294-76394,76495-76526,76652-76662,
            80420-80924,80999-81181,81282-81373,81491-81764,
            81840-82053,82158-82228,82403-82509,82967-83016,
            83125-83208,84060-84119,84196-84285,84824-84900,
            85022-85106,85224-85304,85492-85595,85793-85842,
            86625-86731,87603-87725,87838-87889,88090-88202,
            88265-88405,88513-88602
          Length = 969

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -3

Query: 295  FGKGTYRGVCAQLIFTRLVYDSI-VRAEVSGAFCFLRVCYRIKGKDTIE----LPDVTAL 131
            +G   +RG   Q  F  +++  I   A +S +    ++ YR+  +D             +
Sbjct: 864  YGYTPFRGKTRQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEI 923

Query: 130  KATKFXQGLA-PKQSAGSPPKPKVTQTQKTSVFNDMLVTNHR 8
            K   F +G+  P   A +PPK ++    K  +    LVTN+R
Sbjct: 924  KGHPFFRGINWPLIRATAPPKLEIPLFSKDDMEKKGLVTNNR 965


>11_01_0010 + 78629-78641,80422-80522,80633-80664,80790-80800,
            84559-85063,85136-85318,85419-85510,85628-85901,
            85977-86190,86295-86365,86540-86646,87104-87153,
            87262-87345,88197-88256,88333-88422,88961-89037,
            89160-89244,89362-89442,89630-89733,89931-89980,
            90764-90870,91743-91865,91978-92029,92230-92342,
            92404-92544,92656-92745
          Length = 969

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = -3

Query: 295  FGKGTYRGVCAQLIFTRLVYDSI-VRAEVSGAFCFLRVCYRIKGKDTIE----LPDVTAL 131
            +G   +RG   Q  F  +++  I   A +S +    ++ YR+  +D             +
Sbjct: 864  YGYTPFRGKTRQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEI 923

Query: 130  KATKFXQGLA-PKQSAGSPPKPKVTQTQKTSVFNDMLVTNHR 8
            K   F +G+  P   A +PPK ++    K  +    LVTN+R
Sbjct: 924  KGHPFFRGINWPLIRATAPPKLEIPLFSKDDMEKKGLVTNNR 965


>01_07_0227 +
           42144437-42144446,42145059-42145428,42145528-42145649,
           42145767-42145935,42146236-42146545,42146742-42146825,
           42147012-42147083,42147780-42147821,42147931-42148020,
           42148106-42148213,42148292-42148384,42148540-42148619,
           42148701-42148953,42151222-42151236
          Length = 605

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 137 CYIREFDGVLPFDSVTYSKEAECTRYFCAH 226
           C I+  + +L   +   SK A+C RYFC H
Sbjct: 182 CLIKMLEEILERAAEISSKLAQCDRYFCGH 211


>06_01_1107 +
           9120664-9120793,9120882-9121615,9121694-9123069,
           9123152-9123322,9123402-9123702
          Length = 903

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = -1

Query: 333 VQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGRTPS 154
           V  ++++    S+  K H  + +L+S+ H     A C    RVH      V E     PS
Sbjct: 438 VDHIEVIVVIQSISNKRHLHIPILNSNFHLMQGAAQCVLLARVHPTFAPEVAEGMAFKPS 497


>04_01_0048 +
           522423-522552,522641-523374,523453-524828,528100-528400
          Length = 846

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = -1

Query: 333 VQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGRTPS 154
           V  ++++    S+  K H  + +L+S+ H     A C    RVH      V E     PS
Sbjct: 438 VDHIEVIVVIRSISNKRHLHIPILNSNFHLMQGAAQCVLLARVHPTFAPEVAEGMAFKPS 497


>03_03_0060 - 14157352-14158851
          Length = 499

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 137 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTP 277
           C++R  DGV+P +S T   E  CT     +  V   SC  E+  DTP
Sbjct: 251 CFVRSGDGVVP-ESTTTGMEL-CT--IGGNGGVSVGSCWREIVADTP 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,942,988
Number of Sequences: 37544
Number of extensions: 189887
Number of successful extensions: 539
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)